CuGenDBv2

Gene ID	Lag0041867
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Regulator of rDNA transcription protein 15
Genome location	chr13:29643527..29644318
RNA-Seq Expression	Lag0041867
Synteny	Lag0041867
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

PHT24925.1 hypothetical protein CQW23_35419 [Capsicum baccatum]

2.6e-49

80.15

Show/hide

Query:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS
        MSSA+IGP  +    K GQCPASDSRNNRIPL RTSSEL VR   KA +  VPS SP RHAATRS  GSSSSSPPT DGFGTGTPVP+PQSQSFSR YGS
Subjt:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS

Query:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI
        ILPTSLAYIVPSTRGCSPWR DAVMSTTGRGRHSV+
Subjt:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI

PHT25129.1 hypothetical protein CQW23_35230 [Capsicum baccatum]

8.8e-50

80.88

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Query:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS
        MSSAQIGP  +    K GQCPASDSRNNRIPL RTSSEL VR   KA +  VPS SP RHAATRS  GSSSSSPPT DGFGTGTPVP+PQSQSFSR YGS
Subjt:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS

Query:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI
        ILPTSLAYIVPSTRGCSPWR DAVMSTTGRGRHSV+
Subjt:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI

PHT25201.1 Protein TAR1 [Capsicum baccatum]

2.6e-49

80.15

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Query:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS
        MSSA+IGP  +    K GQCPASDSRNNRIPL RTSSEL VR   KA +  VPS SP RHAATRS  GSSSSSPPT DGFGTGTPVP+PQSQSFSR YGS
Subjt:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS

Query:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI
        ILPTSLAYIVPSTRGCSPWR DAVMSTTGRGRHSV+
Subjt:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI

PHT25565.1 hypothetical protein CQW23_34810 [Capsicum baccatum]

2.6e-49

80.15

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Query:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS
        MSSA+IGP  +    K GQCPASDSRNNRIPL RTSSEL VR   KA +  VPS SP RHAATRS  GSSSSSPPT DGFGTGTPVP+PQSQSFSR YGS
Subjt:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS

Query:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI
        ILPTSLAYIVPSTRGCSPWR DAVMSTTGRGRHSV+
Subjt:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI

PHT27036.1 hypothetical protein CQW23_33352 [Capsicum baccatum]

2.6e-49

80.15

Show/hide

Query:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS
        MSSA+IGP  +    K GQCPASDSRNNRIPL RTSSEL VR   KA +  VPS SP RHAATRS  GSSSSSPPT DGFGTGTPVP+PQSQSFSR YGS
Subjt:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS

Query:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI
        ILPTSLAYIVPSTRGCSPWR DAVMSTTGRGRHSV+
Subjt:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI

TrEMBL top hits

e value

%identity

Alignment

A0A2G2UWC5 Uncharacterized protein

1.2e-49

80.15

Show/hide

Query:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS
        MSSA+IGP  +    K GQCPASDSRNNRIPL RTSSEL VR   KA +  VPS SP RHAATRS  GSSSSSPPT DGFGTGTPVP+PQSQSFSR YGS
Subjt:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS

Query:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI
        ILPTSLAYIVPSTRGCSPWR DAVMSTTGRGRHSV+
Subjt:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI

A0A2G2UWM1 Uncharacterized protein

4.3e-50

80.88

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Query:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS
        MSSAQIGP  +    K GQCPASDSRNNRIPL RTSSEL VR   KA +  VPS SP RHAATRS  GSSSSSPPT DGFGTGTPVP+PQSQSFSR YGS
Subjt:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS

Query:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI
        ILPTSLAYIVPSTRGCSPWR DAVMSTTGRGRHSV+
Subjt:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI

A0A2G2UX29 Uncharacterized protein

1.2e-49

80.15

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Query:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS
        MSSA+IGP  +    K GQCPASDSRNNRIPL RTSSEL VR   KA +  VPS SP RHAATRS  GSSSSSPPT DGFGTGTPVP+PQSQSFSR YGS
Subjt:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS

Query:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI
        ILPTSLAYIVPSTRGCSPWR DAVMSTTGRGRHSV+
Subjt:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI

A0A2G2UXT4 Uncharacterized protein

1.2e-49

80.15

Show/hide

Query:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS
        MSSA+IGP  +    K GQCPASDSRNNRIPL RTSSEL VR   KA +  VPS SP RHAATRS  GSSSSSPPT DGFGTGTPVP+PQSQSFSR YGS
Subjt:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS

Query:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI
        ILPTSLAYIVPSTRGCSPWR DAVMSTTGRGRHSV+
Subjt:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI

A0A2G2UZS0 Uncharacterized protein

1.2e-49

80.15

Show/hide

Query:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS
        MSSA+IGP  +    K GQCPASDSRNNRIPL RTSSEL VR   KA +  VPS SP RHAATRS  GSSSSSPPT DGFGTGTPVP+PQSQSFSR YGS
Subjt:  MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGS

Query:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI
        ILPTSLAYIVPSTRGCSPWR DAVMSTTGRGRHSV+
Subjt:  ILPTSLAYIVPSTRGCSPWRLDAVMSTTGRGRHSVI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTCTTCTGCCCAAATCGGCCCGCCGAGGCAGGCCTTGGGACCAAAAAGAGGGCAGTGCCCCGCTTCCGATTCACGGAATAATCGGATTCCCCTTGCCCGTACCAGTTC
TGAGTTGACTGTTCGATGCTTGAGGAAGGCTCTTAAGAGAGCCGTTCCCAGTCTGTCCCCTGTCCGGCACGCGGCGACCCGCTCTCACTACGGAAGCAGCTCGAGCAGTC
CACCGACAACCGACGGGTTTGGGACTGGGACCCCCGTGCCCACCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTT
CCATCGACCAGAGGTTGTTCACCTTGGAGACTTGATGCGGTTATGAGTACGACCGGGCGTGGGAGGCACTCGGTCATCTAG

mRNA sequence

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Protein sequence

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MSSAQIGPPRQALGPKRGQCPASDSRNNRIPLARTSSELTVRCLRKALKRAVPSLSPVRHAATRSHYGSSSSSPPTTDGFGTGTPVPTPQSQSFSRGYGSILPTSLAYIV
PSTRGCSPWRLDAVMSTTGRGRHSVI

Lag0041867 (gene) of Sponge gourd (AG-4) v1 genome