; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041882 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041882
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr13:30458930..30460087
RNA-Seq ExpressionLag0041882
SyntenyLag0041882
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0032259 - methylation (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN68364.1 hypothetical protein VITISV_021899 [Vitis vinifera]1.2e-8861.98Show/hide
Query:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY
        LS++DG  LE  T YRSLVGALQYCT+TRPDI++ VNKLCQF+HAPT++H+Q VKR+LRY+KG+   GL   PSSS  +  YTDADWASCPDDRRSTSGY
Subjt:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY

Query:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR
        CIF G NLVSW++SKQKV+SRSS ESEYRGL+N A+E+ WIQS+L EL +    PP+L CDN+S TY+AANP++HSR KH+E+D+HF+RE+V +K L VR
Subjt:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDV-----NILLYCVILAYFLVKFV
        F+PSEDQ+AD+ TK L +  F+ LR+KLTV+S P  L GDV     + +L  + L+ F V  V
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDV-----NILLYCVILAYFLVKFV

RVW23711.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]3.9e-8766.11Show/hide
Query:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY
        LS+SDG  LE  T YRSLVGALQYCT+TRPDI++ VNKLCQF+HAPT++H+QAVKR+ RY+KG+   GL   PSSS  +  YTDA+WASCPDDRRSTSGY
Subjt:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY

Query:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR
        CIF G NLVSW++SKQKV+SRSS ESEYRGL+N A+E+ WIQS+L EL V    P +L CDN+S TY+AANPV+HSR KH+E D+HF+RE+V +K L VR
Subjt:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAG
        F+PSEDQ+AD+ TK L + RF+ LR+KLTV+S P  L G
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAG

RVW26376.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.2e-8862.36Show/hide
Query:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY
        LS++DG  LE  T YRSLVGALQYCT+TRPDI++ VNKLCQF+HAPT++H+Q VKR+LRY+KG+   GL   PSSS  +  YTDADWASCP+DRRSTSGY
Subjt:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY

Query:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR
        CIF G NLVSW++SKQKV+SRSS ESEYRGL+NVA+E+ WIQS+L EL V    PP+L CDN+S TY+AANP++HSR KH+E+D+HF+RE+V +K L VR
Subjt:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDV-----NILLYCVILAYFLVKFV
        F+PSEDQ+AD+ TK L +  F+ LR+KLTV+S P  L GDV     + +L  + L+ F V  V
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDV-----NILLYCVILAYFLVKFV

RVW84602.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]2.5e-8964.52Show/hide
Query:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY
        LS++DG  LE  T YRSLVGALQYCT+T+PDI++ VNKLCQF+HAPT++H+QAVKR+LRY+KG+   GL   PSSS  +  YTDADWASCPDDRRSTSGY
Subjt:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY

Query:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR
        CI+ G NLVSW++SKQKV+SRSS ESEYRGL+N A+E+ WIQS+L EL V    PP+L CDN+S TY+AANPV+HSR KH+E+D+HF+RE+V +K L VR
Subjt:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDVNILLYCV
        F+PSEDQ+ D+ TK L + RF+ LR+KL V+S P  L GDV  L  C+
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDVNILLYCV

RVX14515.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]2.1e-8864.52Show/hide
Query:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY
        LS++DG  LE  T YRSLVGALQYCT+TRPDI++ VNKLCQF+HAPT++H+QAVKR+L Y+KG+   GL   PSSS ++  YTDADWASCPDDRRSTSGY
Subjt:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY

Query:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR
        CIF G NLVSW++SKQKV+SRSS ESEYRGL+N  +E+ WIQS+L EL V    PP+L CDN+S TY+AANPV+HSR KH+E+D+HF+RE+V +K L VR
Subjt:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDVNILLYCV
        F+PSEDQ+AD+  K L + RF+ LR+KLTV+S P    GDV  L  C+
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDVNILLYCV

TrEMBL top hitse value%identityAlignment
A0A438CKJ3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-8766.11Show/hide
Query:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY
        LS+SDG  LE  T YRSLVGALQYCT+TRPDI++ VNKLCQF+HAPT++H+QAVKR+ RY+KG+   GL   PSSS  +  YTDA+WASCPDDRRSTSGY
Subjt:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY

Query:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR
        CIF G NLVSW++SKQKV+SRSS ESEYRGL+N A+E+ WIQS+L EL V    P +L CDN+S TY+AANPV+HSR KH+E D+HF+RE+V +K L VR
Subjt:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAG
        F+PSEDQ+AD+ TK L + RF+ LR+KLTV+S P  L G
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAG

A0A438CT43 Retrovirus-related Pol polyprotein from transposon RE15.9e-8962.36Show/hide
Query:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY
        LS++DG  LE  T YRSLVGALQYCT+TRPDI++ VNKLCQF+HAPT++H+Q VKR+LRY+KG+   GL   PSSS  +  YTDADWASCP+DRRSTSGY
Subjt:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY

Query:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR
        CIF G NLVSW++SKQKV+SRSS ESEYRGL+NVA+E+ WIQS+L EL V    PP+L CDN+S TY+AANP++HSR KH+E+D+HF+RE+V +K L VR
Subjt:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDV-----NILLYCVILAYFLVKFV
        F+PSEDQ+AD+ TK L +  F+ LR+KLTV+S P  L GDV     + +L  + L+ F V  V
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDV-----NILLYCVILAYFLVKFV

A0A438HJI6 Retrovirus-related Pol polyprotein from transposon RE11.2e-8964.52Show/hide
Query:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY
        LS++DG  LE  T YRSLVGALQYCT+T+PDI++ VNKLCQF+HAPT++H+QAVKR+LRY+KG+   GL   PSSS  +  YTDADWASCPDDRRSTSGY
Subjt:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY

Query:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR
        CI+ G NLVSW++SKQKV+SRSS ESEYRGL+N A+E+ WIQS+L EL V    PP+L CDN+S TY+AANPV+HSR KH+E+D+HF+RE+V +K L VR
Subjt:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDVNILLYCV
        F+PSEDQ+ D+ TK L + RF+ LR+KL V+S P  L GDV  L  C+
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDVNILLYCV

A0A438JZY3 Retrovirus-related Pol polyprotein from transposon RE11.0e-8864.52Show/hide
Query:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY
        LS++DG  LE  T YRSLVGALQYCT+TRPDI++ VNKLCQF+HAPT++H+QAVKR+L Y+KG+   GL   PSSS ++  YTDADWASCPDDRRSTSGY
Subjt:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY

Query:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR
        CIF G NLVSW++SKQKV+SRSS ESEYRGL+N  +E+ WIQS+L EL V    PP+L CDN+S TY+AANPV+HSR KH+E+D+HF+RE+V +K L VR
Subjt:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDVNILLYCV
        F+PSEDQ+AD+  K L + RF+ LR+KLTV+S P    GDV  L  C+
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDVNILLYCV

A5BVZ9 Reverse transcriptase Ty1/copia-type domain-containing protein5.9e-8961.98Show/hide
Query:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY
        LS++DG  LE  T YRSLVGALQYCT+TRPDI++ VNKLCQF+HAPT++H+Q VKR+LRY+KG+   GL   PSSS  +  YTDADWASCPDDRRSTSGY
Subjt:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY

Query:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR
        CIF G NLVSW++SKQKV+SRSS ESEYRGL+N A+E+ WIQS+L EL +    PP+L CDN+S TY+AANP++HSR KH+E+D+HF+RE+V +K L VR
Subjt:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDV-----NILLYCVILAYFLVKFV
        F+PSEDQ+AD+ TK L +  F+ LR+KLTV+S P  L GDV     + +L  + L+ F V  V
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDV-----NILLYCVILAYFLVKFV

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.3e-3637.39Show/hide
Query:  TEYRSLVGALQYCTL-TRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSC--SITCYTDADWASCPDDRRSTSGYCIFLGN-NL
        T  RSL+G L Y  L TRPD++ AVN L ++     +   Q +KR+LRY+KGT  + L+   + +    I  Y D+DWA    DR+ST+GY   + + NL
Subjt:  TEYRSLVGALQYCTL-TRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSC--SITCYTDADWASCPDDRRSTSGYCIFLGN-NL

Query:  VSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVRFVPSEDQI
        + WN+ +Q  ++ SS E+EY  L     E  W++ +L  + +   +P  +  DN     IA NP  H R KHI++ +HF RE+V    + + ++P+E+Q+
Subjt:  VSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVRFVPSEDQI

Query:  ADVFTKGLHSPRFIGLRTKLTVVSNPCSLA
        AD+FTK L + RF+ LR KL ++ +  S A
Subjt:  ADVFTKGLHSPRFIGLRTKLTVVSNPCSLA

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-944.3e-2836.54Show/hide
Query:  YRSLVGALQYCTL-TRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGYCIFLGNNLVSWNS
        Y S VG+L Y  + TRPDI+ AV  + +FL  P   H +AVK +LRY++GT+    L    S   +  YTDAD A   D+R+S++GY        +SW S
Subjt:  YRSLVGALQYCTL-TRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGYCIFLGNNLVSWNS

Query:  SKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVRFVPSEDQIADVFT
          QK ++ S+ E+EY   +    E+ W++  L EL +      ++ CD+ SA  ++ N + H+RTKHI+V +H+IRE V  + L V  + + +  AD+ T
Subjt:  SKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVRFVPSEDQIADVFT

Query:  KGLHSPRF
        K +   +F
Subjt:  KGLHSPRF

P92519 Uncharacterized mitochondrial protein AtMg008101.2e-3350.78Show/hide
Query:  TEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGYCIFLGNNLVSWN
        +++RS+VGALQY TLTRPDIS+AVN +CQ +H PT +    +KR+LRY+KGT   GL +  +S  ++  + D+DWA C   RRST+G+C FLG N++SW+
Subjt:  TEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGYCIFLGNNLVSWN

Query:  SSKQKVMSRSSAESEYRGLSNVASEIAW
        + +Q  +SRSS E+EYR L+  A+E+ W
Subjt:  SSKQKVMSRSSAESEYRGLSNVASEIAW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.9e-6149.15Show/hide
Query:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY
        LSL  G  L   TEYR +VG+LQY   TRPDIS+AVN+L QF+H PT  H+QA+KR+LRY+ GT + G+ +   ++ S+  Y+DADWA   DD  ST+GY
Subjt:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY

Query:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR
         ++LG++ +SW+S KQK + RSS E+EYR ++N +SE+ WI S+L EL +    PP++ CDN+ ATY+ ANPV HSR KHI +D+HFIR +V    L V 
Subjt:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCS
         V + DQ+AD  TK L    F    +K+ V   P S
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.9e-6046.91Show/hide
Query:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY
        L+L  G  L   TEYR +VG+LQY   TRPD+S+AVN+L Q++H PT  H  A+KR+LRY+ GT   G+ +   ++ S+  Y+DADWA   DD  ST+GY
Subjt:  LSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGY

Query:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR
         ++LG++ +SW+S KQK + RSS E+EYR ++N +SE+ WI S+L EL +  + PP++ CDN+ ATY+ ANPV HSR KHI +D+HFIR +V    L V 
Subjt:  CIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREKVARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDVNI
         V + DQ+AD  TK L    F     K+ V+  P S  G + I
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDVNI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.5e-4844.19Show/hide
Query:  SLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGYC
        S   G     A  YR L+G L Y  +TR DISFAVNKL QF  AP  +H QAV ++L YIKGT   GL  +  +   +  ++DA + SC D RRST+GYC
Subjt:  SLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGYC

Query:  IFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREK-VARKQLLVR
        +FLG +L+SW S KQ+V+S+SSAE+EYR LS    E+ W+     EL +  + P LL CDN +A +IA N V H RTKHIE D H +RE+ V +  L   
Subjt:  IFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAANPVMHSRTKHIEVDHHFIREK-VARKQLLVR

Query:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAG-DVNILLYCVILAYFLVKF
        F   ++Q  D FT+ L SP    LR  +  + +   LAG +  I    + L  FL  F
Subjt:  FVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAG-DVNILLYCVILAYFLVKF

ATMG00240.1 Gag-Pol-related retrotransposon family protein2.4e-1851.28Show/hide
Query:  YCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGYC
        Y T+TRPD++FAVN+L QF  A  T+ MQAV ++L Y+KGT   GL  + +S   +  + D+DWASCPD RRS +G+C
Subjt:  YCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGYC

ATMG00810.1 DNA/RNA polymerases superfamily protein8.3e-3550.78Show/hide
Query:  TEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGYCIFLGNNLVSWN
        +++RS+VGALQY TLTRPDIS+AVN +CQ +H PT +    +KR+LRY+KGT   GL +  +S  ++  + D+DWA C   RRST+G+C FLG N++SW+
Subjt:  TEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYIKGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGYCIFLGNNLVSWN

Query:  SSKQKVMSRSSAESEYRGLSNVASEIAW
        + +Q  +SRSS E+EYR L+  A+E+ W
Subjt:  SSKQKVMSRSSAESEYRGLSNVASEIAW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTTCCTATTTCCTTGGTGTTCAAGTCTCTCGGCAAGGTAAAGATCTACATCTTTCTCAGCAAAAATACATCAGGGATCGAGTCTCTTGGGCCAAGTTGGACTCT
TGTATACCAACTTCTTCTCCCATGTCTGTTGGCCCCCCTCTCACTGTCTGATGGTGAGCCACTGGAATCAGCGACTGAGTATCGGAGCTTAGTAGGCGCCTTGCAATACT
GTACTCTCACGCGGCCGGATATCAGCTTCGCAGTCAACAAGTTGTGTCAATTCCTCCATGCTCCCACTACATCCCATATGCAGGCAGTTAAACGACTTCTGCGATATATC
AAAGGTACATCTTCGTTGGGTCTGCTTATGACTCCTTCTTCTTCATGCTCTATCACTTGTTACACAGACGCAGACTGGGCGAGTTGTCCAGATGATAGAAGGAGCACCAG
TGGGTATTGTATTTTTTTGGGGAACAACTTGGTTTCATGGAATTCCTCAAAGCAAAAGGTCATGTCTCGGTCAAGTGCAGAATCTGAGTATAGAGGACTTTCTAATGTCG
CGTCTGAAATTGCATGGATTCAGTCGGTTCTTGGTGAACTTTGTGTTTCTTGTGCTTCCCCTCCTCTCTTACTATGTGATAATATATCTGCCACTTACATTGCTGCCAAC
CCAGTGATGCACAGTAGAACGAAGCATATCGAAGTAGATCATCACTTCATAAGAGAGAAGGTGGCTCGCAAGCAACTGTTGGTTAGATTCGTACCTTCAGAAGATCAGAT
TGCTGACGTGTTTACGAAGGGTCTGCATTCTCCAAGGTTTATTGGTTTGAGAACCAAGCTCACCGTGGTTTCCAACCCGTGTTCGCTTGCGGGGGATGTTAATATCCTTC
TTTACTGTGTAATCCTTGCTTATTTTCTGGTTAAGTTTGTCTCCTTTGGTCATTGTATTTTCTGTTATCCTTTGGCCTGTTGCCATGCTACACGTGTCCCTGTCTTTTGT
TATTTAATGGACAATCATTGGTGCTCTGTGATTTGGAGCACTCTCTCTTCAAAACACTATCGTCTCTATAGTGTCTATATAAACCTCACCAAAAGAGGAAACGCGTTGAT
GTTTGCCCATTGGAACACGAAATTGAGTACCACCACAGGGAAGCATCCACACCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTTTCCTATTTCCTTGGTGTTCAAGTCTCTCGGCAAGGTAAAGATCTACATCTTTCTCAGCAAAAATACATCAGGGATCGAGTCTCTTGGGCCAAGTTGGACTCT
TGTATACCAACTTCTTCTCCCATGTCTGTTGGCCCCCCTCTCACTGTCTGATGGTGAGCCACTGGAATCAGCGACTGAGTATCGGAGCTTAGTAGGCGCCTTGCAATACT
GTACTCTCACGCGGCCGGATATCAGCTTCGCAGTCAACAAGTTGTGTCAATTCCTCCATGCTCCCACTACATCCCATATGCAGGCAGTTAAACGACTTCTGCGATATATC
AAAGGTACATCTTCGTTGGGTCTGCTTATGACTCCTTCTTCTTCATGCTCTATCACTTGTTACACAGACGCAGACTGGGCGAGTTGTCCAGATGATAGAAGGAGCACCAG
TGGGTATTGTATTTTTTTGGGGAACAACTTGGTTTCATGGAATTCCTCAAAGCAAAAGGTCATGTCTCGGTCAAGTGCAGAATCTGAGTATAGAGGACTTTCTAATGTCG
CGTCTGAAATTGCATGGATTCAGTCGGTTCTTGGTGAACTTTGTGTTTCTTGTGCTTCCCCTCCTCTCTTACTATGTGATAATATATCTGCCACTTACATTGCTGCCAAC
CCAGTGATGCACAGTAGAACGAAGCATATCGAAGTAGATCATCACTTCATAAGAGAGAAGGTGGCTCGCAAGCAACTGTTGGTTAGATTCGTACCTTCAGAAGATCAGAT
TGCTGACGTGTTTACGAAGGGTCTGCATTCTCCAAGGTTTATTGGTTTGAGAACCAAGCTCACCGTGGTTTCCAACCCGTGTTCGCTTGCGGGGGATGTTAATATCCTTC
TTTACTGTGTAATCCTTGCTTATTTTCTGGTTAAGTTTGTCTCCTTTGGTCATTGTATTTTCTGTTATCCTTTGGCCTGTTGCCATGCTACACGTGTCCCTGTCTTTTGT
TATTTAATGGACAATCATTGGTGCTCTGTGATTTGGAGCACTCTCTCTTCAAAACACTATCGTCTCTATAGTGTCTATATAAACCTCACCAAAAGAGGAAACGCGTTGAT
GTTTGCCCATTGGAACACGAAATTGAGTACCACCACAGGGAAGCATCCACACCGCTAG
Protein sequenceShow/hide protein sequence
MNFPISLVFKSLGKVKIYIFLSKNTSGIESLGPSWTLVYQLLLPCLLAPLSLSDGEPLESATEYRSLVGALQYCTLTRPDISFAVNKLCQFLHAPTTSHMQAVKRLLRYI
KGTSSLGLLMTPSSSCSITCYTDADWASCPDDRRSTSGYCIFLGNNLVSWNSSKQKVMSRSSAESEYRGLSNVASEIAWIQSVLGELCVSCASPPLLLCDNISATYIAAN
PVMHSRTKHIEVDHHFIREKVARKQLLVRFVPSEDQIADVFTKGLHSPRFIGLRTKLTVVSNPCSLAGDVNILLYCVILAYFLVKFVSFGHCIFCYPLACCHATRVPVFC
YLMDNHWCSVIWSTLSSKHYRLYSVYINLTKRGNALMFAHWNTKLSTTTGKHPHR