| GenBank top hits | e value | %identity | Alignment |
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| KAA0035697.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 2.1e-25 | 42.01 | Show/hide |
Query: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSVKGKDK--------HQRKKNPRKTQP-------KRKKDFLRSHQAFNYS
KV+D YCKYH V+SHPVEKCFVLKE+IL+LA+E KI+LD+DE+AQ+NHV V+ QR+K + + ++ S + N
Subjt: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSVKGKDK--------HQRKKNPRKTQP-------KRKKDFLRSHQAFNYS
Query: SFGIPKNEYVHNR--------------------RRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VPEAKLFDEVNKDKKLHS
S I + V NR N TST+ S F+RL +S K+ R +TS FD LK+T+D+ +++M +AK F E N D K+HS
Subjt: SFGIPKNEYVHNR--------------------RRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VPEAKLFDEVNKDKKLHS
Query: IVPSRMKRKLSILINTEGS
V SRMKRKLS+ INTEGS
Subjt: IVPSRMKRKLSILINTEGS
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| KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.8e-30 | 44.68 | Show/hide |
Query: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHV------SVKGKDKH--QRKKN-------PR---KTQPKRKKDFLRSHQAF
KV+DP YCKYHRV+SHPVEKCFVLKE+IL+LA+E KIELD+DEVAQ+NH +KGKD+ Q +++ PR + P+ + H A
Subjt: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHV------SVKGKDKH--QRKKN-------PR---KTQPKRKKDFLRSHQAF
Query: ------NYSSFGIPKNEYVHNRRRN----------------PLLVSTS-----------TRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VP
NY S N N+R + L V+T TR ST +RLS+STLK+ R +TS FD LK+T+D+ +R+M
Subjt: ------NYSSFGIPKNEYVHNRRRN----------------PLLVSTS-----------TRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VP
Query: EAKLFDEVNKDKKLHSIVPSRMKRKLSILINTEGS
+AK F E N D K+HS VPSRMKRKL + INTEGS
Subjt: EAKLFDEVNKDKKLHSIVPSRMKRKLSILINTEGS
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| KAA0065608.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 1.3e-27 | 40.61 | Show/hide |
Query: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSV----------------------------------------KGKDKHQR
KV+DP YCKYHRV+SH +EKCFVLKE+IL+LA + KIELD+DEVAQ+NH +V D ++
Subjt: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSV----------------------------------------KGKDKHQR
Query: KKNPRKTQPK-----RKKDFLRSHQAFNYSSFGIPKNEYVHNRRRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKMVP-EAKLFD
N + + + R K F S + + E ++ P ST TR STF+RLS+ST K+ R +TS FD LK+T+D+ +++M +AK F
Subjt: KKNPRKTQPK-----RKKDFLRSHQAFNYSSFGIPKNEYVHNRRRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKMVP-EAKLFD
Query: EVNKDKKLHSIVPSRMKRKLSILINTEGS
E N D K+HS VPSR KRKLS+ INTEGS
Subjt: EVNKDKKLHSIVPSRMKRKLSILINTEGS
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| KAA0066166.1 Retrotransposon gag protein [Cucumis melo var. makuwa] | 3.6e-25 | 41.44 | Show/hide |
Query: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSVKGKDKHQRKKNPRKTQPKRKKDFLRSHQA------FNYSSF-------
KV+DP YCKYHRV+SHPVEKCF+LK++IL+LA+E KIELD+ EVAQ+NHV+V+ + + + H NY+S
Subjt: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSVKGKDKHQRKKNPRKTQPKRKKDFLRSHQA------FNYSSF-------
Query: GIPKNEYVHNR--------------------RRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VPEAKLFDEVNKDKKLHSIV
+ + YV +R +N +STST+ S F+RLS+ST K R TS FD LK+T+D+ +R+M +AK F E N D K+++ V
Subjt: GIPKNEYVHNR--------------------RRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VPEAKLFDEVNKDKKLHSIV
Query: PSRMKRKLSILINTE-GSFEGF
PS MKRKL + INTE GS + F
Subjt: PSRMKRKLSILINTE-GSFEGF
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| TYK15207.1 Retrotransposon gag protein [Cucumis melo var. makuwa] | 1.3e-25 | 41.89 | Show/hide |
Query: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSVKGKDKHQRKKNPRKTQPKRKKDFLRSHQA------FNYSSF-------
KV+DP YCKYHRV+SHPVEKCF+LKE+IL+LA+E KIELD+ EVAQ+NHV+V+ + + + H NY+S
Subjt: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSVKGKDKHQRKKNPRKTQPKRKKDFLRSHQA------FNYSSF-------
Query: GIPKNEYVHNR--------------------RRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VPEAKLFDEVNKDKKLHSIV
+ + YV +R +N +STST+ S F+RLS+ST K R TS FD LK+T+D+ +R+M +AK F E N D K+++ V
Subjt: GIPKNEYVHNR--------------------RRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VPEAKLFDEVNKDKKLHSIV
Query: PSRMKRKLSILINTE-GSFEGF
PS MKRKL + INTE GS + F
Subjt: PSRMKRKLSILINTE-GSFEGF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7URH1 Ty3-gypsy retrotransposon protein | 1.8e-30 | 44.68 | Show/hide |
Query: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHV------SVKGKDKH--QRKKN-------PR---KTQPKRKKDFLRSHQAF
KV+DP YCKYHRV+SHPVEKCFVLKE+IL+LA+E KIELD+DEVAQ+NH +KGKD+ Q +++ PR + P+ + H A
Subjt: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHV------SVKGKDKH--QRKKN-------PR---KTQPKRKKDFLRSHQAF
Query: ------NYSSFGIPKNEYVHNRRRN----------------PLLVSTS-----------TRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VP
NY S N N+R + L V+T TR ST +RLS+STLK+ R +TS FD LK+T+D+ +R+M
Subjt: ------NYSSFGIPKNEYVHNRRRN----------------PLLVSTS-----------TRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VP
Query: EAKLFDEVNKDKKLHSIVPSRMKRKLSILINTEGS
+AK F E N D K+HS VPSRMKRKL + INTEGS
Subjt: EAKLFDEVNKDKKLHSIVPSRMKRKLSILINTEGS
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| A0A5A7VII4 Retrotransposon gag protein | 1.8e-25 | 41.44 | Show/hide |
Query: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSVKGKDKHQRKKNPRKTQPKRKKDFLRSHQA------FNYSSF-------
KV+DP YCKYHRV+SHPVEKCF+LK++IL+LA+E KIELD+ EVAQ+NHV+V+ + + + H NY+S
Subjt: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSVKGKDKHQRKKNPRKTQPKRKKDFLRSHQA------FNYSSF-------
Query: GIPKNEYVHNR--------------------RRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VPEAKLFDEVNKDKKLHSIV
+ + YV +R +N +STST+ S F+RLS+ST K R TS FD LK+T+D+ +R+M +AK F E N D K+++ V
Subjt: GIPKNEYVHNR--------------------RRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VPEAKLFDEVNKDKKLHSIV
Query: PSRMKRKLSILINTE-GSFEGF
PS MKRKL + INTE GS + F
Subjt: PSRMKRKLSILINTE-GSFEGF
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| A0A5D3CA53 Retrotransposon gag protein | 6.5e-28 | 40.61 | Show/hide |
Query: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSV----------------------------------------KGKDKHQR
KV+DP YCKYHRV+SH +EKCFVLKE+IL+LA + KIELD+DEVAQ+NH +V D ++
Subjt: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSV----------------------------------------KGKDKHQR
Query: KKNPRKTQPK-----RKKDFLRSHQAFNYSSFGIPKNEYVHNRRRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKMVP-EAKLFD
N + + + R K F S + + E ++ P ST TR STF+RLS+ST K+ R +TS FD LK+T+D+ +++M +AK F
Subjt: KKNPRKTQPK-----RKKDFLRSHQAFNYSSFGIPKNEYVHNRRRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKMVP-EAKLFD
Query: EVNKDKKLHSIVPSRMKRKLSILINTEGS
E N D K+HS VPSR KRKLS+ INTEGS
Subjt: EVNKDKKLHSIVPSRMKRKLSILINTEGS
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| A0A5D3CTF5 Retrotransposon gag protein | 6.1e-26 | 41.89 | Show/hide |
Query: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSVKGKDKHQRKKNPRKTQPKRKKDFLRSHQA------FNYSSF-------
KV+DP YCKYHRV+SHPVEKCF+LKE+IL+LA+E KIELD+ EVAQ+NHV+V+ + + + H NY+S
Subjt: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSVKGKDKHQRKKNPRKTQPKRKKDFLRSHQA------FNYSSF-------
Query: GIPKNEYVHNR--------------------RRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VPEAKLFDEVNKDKKLHSIV
+ + YV +R +N +STST+ S F+RLS+ST K R TS FD LK+T+D+ +R+M +AK F E N D K+++ V
Subjt: GIPKNEYVHNR--------------------RRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VPEAKLFDEVNKDKKLHSIV
Query: PSRMKRKLSILINTE-GSFEGF
PS MKRKL + INTE GS + F
Subjt: PSRMKRKLSILINTE-GSFEGF
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| A0A5D3E4T1 Retrotransposon gag protein | 1.0e-25 | 42.01 | Show/hide |
Query: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSVKGKDK--------HQRKKNPRKTQP-------KRKKDFLRSHQAFNYS
KV+D YCKYH V+SHPVEKCFVLKE+IL+LA+E KI+LD+DE+AQ+NHV V+ QR+K + + ++ S + N
Subjt: KVNDPKYCKYHRVVSHPVEKCFVLKEVILRLAKEGKIELDLDEVAQSNHVSVKGKDK--------HQRKKNPRKTQP-------KRKKDFLRSHQAFNYS
Query: SFGIPKNEYVHNR--------------------RRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VPEAKLFDEVNKDKKLHS
S I + V NR N TST+ S F+RL +S K+ R +TS FD LK+T+D+ +++M +AK F E N D K+HS
Subjt: SFGIPKNEYVHNR--------------------RRNPLLVSTSTRPSTFQRLSVSTLKESRLATSVFDHLKVTSDRPKRKM-VPEAKLFDEVNKDKKLHS
Query: IVPSRMKRKLSILINTEGS
V SRMKRKLS+ INTEGS
Subjt: IVPSRMKRKLSILINTEGS
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