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Lag0041901 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041901
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionShikimate dehydrogenase
Genome locationchr13:30953150..30960026
RNA-Seq ExpressionLag0041901
SyntenyLag0041901
Gene Ontology termsGO:0008652 - cellular amino acid biosynthetic process (biological process)
GO:0009073 - aromatic amino acid family biosynthetic process (biological process)
GO:0009423 - chorismate biosynthetic process (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0019632 - shikimate metabolic process (biological process)
GO:0003855 - 3-dehydroquinate dehydratase activity (molecular function)
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity (molecular function)
GO:0050661 - NADP binding (molecular function)
InterPro domainsIPR022893 - Shikimate dehydrogenase family
IPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3959242.1 hypothetical protein CMV_015929 [Castanea mollissima]7.8e-1148Show/hide
Query:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
        HN   T  SPLAGKL VVIG+GGAGK+LAYGAKEKG RVVIAN TY   R +ANT    A    D   +   D        S  +  +VDE  + +  +R
Subjt:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
KAF3959243.1 hypothetical protein CMV_015929 [Castanea mollissima]7.8e-1148Show/hide
Query:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
        HN   T  SPLAGKL VVIG+GGAGK+LAYGAKEKG RVVIAN TY   R +ANT    A    D   +   D        S  +  +VDE  + +  +R
Subjt:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
XP_002277395.2 PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic isoform X1 [Vitis vinifera]7.8e-1175Show/hide
Query:  DMHNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR
        D+H    T GSPLAGKL VVIG+GGAGK+LAYGAKEKG RVVIAN TYA  R
Subjt:  DMHNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR
XP_023899081.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like isoform X1 [Quercus suber]7.8e-1148Show/hide
Query:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
        HN   T  SPLAGK LVVIG+GGAGK+LAYGAKEKG RVVIAN TY   R +ANT    A    D   +   D        S  +  +VDE  + +  +R
Subjt:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
XP_023899083.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like isoform X2 [Quercus suber]7.8e-1148Show/hide
Query:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
        HN   T  SPLAGK LVVIG+GGAGK+LAYGAKEKG RVVIAN TY   R +ANT    A    D   +   D        S  +  +VDE  + +  +R
Subjt:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
TrEMBL top hitse value%identityAlignment
A0A168S2B8 Shikimate dehydrogenase3.8e-1175Show/hide
Query:  DMHNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR
        D+H    T GSPLAGKL VVIG+GGAGK+LAYGAKEKG RVVIAN TYA  R
Subjt:  DMHNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR
A0A2I4F380 Shikimate dehydrogenase8.4e-1147Show/hide
Query:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
        HN   T  SPLAGKL VVIG+GGAGK+LAYGAKEKG RVVIAN TY   R +A+T    A    D  ++   D        S  +  +VDE  + +  +R
Subjt:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
A0A6P9EHY8 Shikimate dehydrogenase8.4e-1147Show/hide
Query:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
        HN   T  SPLAGKL VVIG+GGAGK+LAYGAKEKG RVVIAN TY   R +A+T    A    D  ++   D        S  +  +VDE  + +  +R
Subjt:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
A0A6P9EK95 Shikimate dehydrogenase8.4e-1147Show/hide
Query:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
        HN   T  SPLAGKL VVIG+GGAGK+LAYGAKEKG RVVIAN TY   R +A+T    A    D  ++   D        S  +  +VDE  + +  +R
Subjt:  HNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR-VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIR
F6HDI5 Shikimate dehydrogenase3.8e-1175Show/hide
Query:  DMHNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR
        D+H    T GSPLAGKL VVIG+GGAGK+LAYGAKEKG RVVIAN TYA  R
Subjt:  DMHNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR
SwissProt top hitse value%identityAlignment
Q9SQT8 Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic4.4e-0978.95Show/hide
Query:  SPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTY
        SPLA K +VVIG+GGAGK+LAYGAKEKG +VVIAN TY
Subjt:  SPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTY
Arabidopsis top hitse value%identityAlignment
AT3G06350.1 dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative3.2e-1078.95Show/hide
Query:  SPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTY
        SPLA K +VVIG+GGAGK+LAYGAKEKG +VVIAN TY
Subjt:  SPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCTTCGCACAGCAGGTCGCACACCCGTTGGTTACACACCTTCCTCGTGTCGGTTTCTTCGCGCAGGCTCGTACAGACTCGCACGCCCGACTTCGTCATGCAGGC
TAGCACGCCCCCCGGTTTCTTCTTCGCGCAACCTTGTTTTCTTCGTCGTGCAACCTCATTTTTTGACATGCATAATGATCGCTTTACAGTTGGTTCACCCTTAGCTGGTA
AGCTCTTGGTTGTCATTGGTTCTGGTGGAGCTGGCAAGTCTCTTGCTTATGGTGCAAAAGAGAAGGGAGTCAGGGTTGTTATTGCTAACCACACGTATGCATGGGTGAGA
GTGGCCAATACGCCGACTCAATACGCCTTCGTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACTTCTAGGAGA
AGTAGATGAGTGTTCCCTTAAGAGGTTGTTCATTAGAGGAGCGCTGGTACTTAAGGAGACAGATGTAACACAGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCATCTTCGCACAGCAGGTCGCACACCCGTTGGTTACACACCTTCCTCGTGTCGGTTTCTTCGCGCAGGCTCGTACAGACTCGCACGCCCGACTTCGTCATGCAGGC
TAGCACGCCCCCCGGTTTCTTCTTCGCGCAACCTTGTTTTCTTCGTCGTGCAACCTCATTTTTTGACATGCATAATGATCGCTTTACAGTTGGTTCACCCTTAGCTGGTA
AGCTCTTGGTTGTCATTGGTTCTGGTGGAGCTGGCAAGTCTCTTGCTTATGGTGCAAAAGAGAAGGGAGTCAGGGTTGTTATTGCTAACCACACGTATGCATGGGTGAGA
GTGGCCAATACGCCGACTCAATACGCCTTCGTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCACTTCTAGGAGA
AGTAGATGAGTGTTCCCTTAAGAGGTTGTTCATTAGAGGAGCGCTGGTACTTAAGGAGACAGATGTAACACAGGGGTAA
Protein sequenceShow/hide protein sequence
MPSSHSRSHTRWLHTFLVSVSSRRLVQTRTPDFVMQASTPPGFFFAQPCFLRRATSFFDMHNDRFTVGSPLAGKLLVVIGSGGAGKSLAYGAKEKGVRVVIANHTYAWVR
VANTPTQYAFVFGDKTEWEAGDMTTQEGIHSFPLLGEVDECSLKRLFIRGALVLKETDVTQG