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Lag0041906 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041906
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr13:31092881..31093282
RNA-Seq ExpressionLag0041906
SyntenyLag0041906
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.4e-1543.31Show/hide
Query:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE
        M S++A+SK +A+S+ Y GPITRSRSK      +Q   I   +L+++ ES +  I   EN ++  + S   +  K + PDVM VMM+DV   E  M E+E
Subjt:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE

Query:  KKISMLLKMVEEKDYEIASLKSQMESR
        +KI++L+K+V+E+D+EIA+LK QM++R
Subjt:  KKISMLLKMVEEKDYEIASLKSQMESR

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]1.4e-1543.31Show/hide
Query:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE
        M S++A+SK +A+S+ Y GPITRSRSK      +Q   I   +L+++ ES +  I   EN ++  + S   +  K + PDVM VMM+DV   E  M E+E
Subjt:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE

Query:  KKISMLLKMVEEKDYEIASLKSQMESR
        +KI++L+K+V+E+D+EIA+LK QM++R
Subjt:  KKISMLLKMVEEKDYEIASLKSQMESR

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.4e-1543.31Show/hide
Query:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE
        M S++A+SK +A+S+ Y GPITRSRSK      +Q   I   +L+++ ES +  I   EN ++  + S   +  K + PDVM VMM+DV   E  M E+E
Subjt:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE

Query:  KKISMLLKMVEEKDYEIASLKSQMESR
        +KI++L+K+V+E+D+EIA+LK QM++R
Subjt:  KKISMLLKMVEEKDYEIASLKSQMESR

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.4e-1543.31Show/hide
Query:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE
        M S++A+SK +A+S+ Y GPITRSRSK      +Q   I   +L+++ ES +  I   EN ++  + S   +  K + PDVM VMM+DV   E  M E+E
Subjt:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE

Query:  KKISMLLKMVEEKDYEIASLKSQMESR
        +KI++L+K+V+E+D+EIA+LK QM++R
Subjt:  KKISMLLKMVEEKDYEIASLKSQMESR

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]1.4e-1543.31Show/hide
Query:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE
        M S++A+SK +A+S+ Y GPITRSRSK      +Q   I   +L+++ ES +  I   EN ++  + S   +  K + PDVM VMM+DV   E  M E+E
Subjt:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE

Query:  KKISMLLKMVEEKDYEIASLKSQMESR
        +KI++L+K+V+E+D+EIA+LK QM++R
Subjt:  KKISMLLKMVEEKDYEIASLKSQMESR

TrEMBL top hitse value%identityAlignment
A0A5A7ULS4 Ty3-gypsy retrotransposon protein2.2e-1439.68Show/hide
Query:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE
        MTS++A+S  + +S+ Y GPITR RSK    E +Q   +   +L+++ ES +  I   ENL++    S   +  K + P++M VMM+D+ T+E  MVE+E
Subjt:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE

Query:  KKISMLLKMVEEKDYEIASLKSQMES
        +K++ L+K+VEE+D+EI +L+ QM +
Subjt:  KKISMLLKMVEEKDYEIASLKSQMES

A0A5A7VCU1 Ty3-gypsy retrotransposon protein9.7e-1540.16Show/hide
Query:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE
        M S++A+S+ + +S+ Y GPITR+RSK    E +Q   +   +L+++ ES +  I   EN ++    S   +  K   PDVM VMM+D+ T+E  M E+E
Subjt:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE

Query:  KKISMLLKMVEEKDYEIASLKSQMESR
        +KI+ L+K+VEE+D+EI +L+ QM++R
Subjt:  KKISMLLKMVEEKDYEIASLKSQMESR

A0A5A7VFQ8 Ty3-gypsy retrotransposon protein5.7e-1540.16Show/hide
Query:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE
        M S++A+SK + +S+ Y+GPITRSRSK    E +Q   +   +L+++ ES +  I   EN ++    S   +  K + PDVM VMM+D+ T E  MV++E
Subjt:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE

Query:  KKISMLLKMVEEKDYEIASLKSQMESR
        +K++ L+K++EE+D+EI +L+ QM +R
Subjt:  KKISMLLKMVEEKDYEIASLKSQMESR

A0A5D3BDK1 Ty3-gypsy retrotransposon protein1.4e-1340.16Show/hide
Query:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE
        M S++A+S  + +S+ Y GPITR+RSK    E +Q   I   +L+++ ES +  I   EN ++    S   +  K + PDVM V+M+D+ T+E  M E+E
Subjt:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE

Query:  KKISMLLKMVEEKDYEIASLKSQMESR
        +KI+ L+K VEE+D+EI +L+ QM +R
Subjt:  KKISMLLKMVEEKDYEIASLKSQMESR

A0A5D3BY54 Ty3-gypsy retrotransposon protein5.7e-1541.73Show/hide
Query:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE
        M S++A+S  + +SN Y GPITRSRSK    E +Q   +   +L+++ ES +  I   EN ++    S   +  K + PDVM VMM+D+ T E  M E+E
Subjt:  MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVE

Query:  KKISMLLKMVEEKDYEIASLKSQMESR
        +KI+ L+K VEE+D+EI +L+ QM +R
Subjt:  KKISMLLKMVEEKDYEIASLKSQMESR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCCGAAGAAGCTTCTTCAAAGATCGCTGCTTCAAGCAACTTCTATGTGGGGCCAATTACTCGCAGTCGCTCCAAAGAAACCCAACACGAAGACAACCAAACTCC
TATCATCACAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCACTGCAGAAAATCTGATGCATGGCAAATTCACTTCTCCTTTTCAGCAACCAA
ACAAAGCATCAAGTCCTGATGTGATGTTTGTTATGATGTCTGATGTAGGTACTAGTGAAGAACATATGGTTGAAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGTT
GAAGAGAAAGACTATGAAATTGCCTCTCTCAAAAGCCAGATGGAGAGTAGGTGTAAAGCCCCAGGATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCCGAAGAAGCTTCTTCAAAGATCGCTGCTTCAAGCAACTTCTATGTGGGGCCAATTACTCGCAGTCGCTCCAAAGAAACCCAACACGAAGACAACCAAACTCC
TATCATCACAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCACTGCAGAAAATCTGATGCATGGCAAATTCACTTCTCCTTTTCAGCAACCAA
ACAAAGCATCAAGTCCTGATGTGATGTTTGTTATGATGTCTGATGTAGGTACTAGTGAAGAACATATGGTTGAAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGTT
GAAGAGAAAGACTATGAAATTGCCTCTCTCAAAAGCCAGATGGAGAGTAGGTGTAAAGCCCCAGGATTTTAA
Protein sequenceShow/hide protein sequence
MTSEEASSKIAASSNFYVGPITRSRSKETQHEDNQTPIITNKMLRRMTESAQLEIATAENLMHGKFTSPFQQPNKASSPDVMFVMMSDVGTSEEHMVEVEKKISMLLKMV
EEKDYEIASLKSQMESRCKAPGF