CuGenDBv2

Gene ID	Lag0041908
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	transcription factor TCP14-like
Genome location	chr13:31113460..31123256
RNA-Seq Expression	Lag0041908
Synteny	Lag0041908
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7023189.1 Transcription factor TCP14, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.0e-18

80.65

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Query:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG
        MSSGLHFMNF APV LVP QQFGSG+GGGNNSSSEGHLNILAGLNP+RSVS+TG+M ++  G
Subjt:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG

XP_022921393.1 transcription factor TCP14-like [Cucurbita moschata]

4.0e-18

80.65

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Query:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG
        MSSGLHFMNF APV LVP QQFGSG+GGGNNSSSEGHLNILAGLNP+RSVS+TG+M ++  G
Subjt:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG

XP_022987192.1 transcription factor TCP14-like [Cucurbita maxima]

4.0e-18

80.65

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Query:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG
        MSSGLHFMNF APV LVP QQFGSG+GGGNNSSSEGHLNILAGLNP+RSVS+TG+M ++  G
Subjt:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG

XP_023516074.1 transcription factor TCP14-like [Cucurbita pepo subsp. pepo]

1.5e-17

79.03

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Query:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG
        MSSGLHFMNF APV LVP QQFGSG+GGGN+SSSEGHLNILAGLNP+RSVS+TG+M ++  G
Subjt:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG

XP_038879801.1 transcription factor TCP14 [Benincasa hispida]

2.0e-17

80.65

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Query:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG
        MSSGLHFMNF APV LVP QQFGSG+GGGNNSSSEGHLNILAGLNP+RSVSS+GV+  +  G
Subjt:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LRN4 Transcription factor

8.9e-16

71.83

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Query:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGG---------NNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG
        MSSGLHFMNF APV LVP QQFGSG+GGG         NNSSSEGHLNILAGLNP+RSVSS+GVM  +  G
Subjt:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGG---------NNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG

A0A5A7T0G2 Transcription factor TCP14

2.2e-14

68.57

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Query:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGG--------NNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG
        MSSGLHFMNF APV LVP QQFGS +GGG        N+SS+EGHLNILAGLNP+RSVS+TGVM  +  G
Subjt:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGG--------NNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG

A0A6J1E3T0 transcription factor TCP14-like

1.9e-18

80.65

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Query:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG
        MSSGLHFMNF APV LVP QQFGSG+GGGNNSSSEGHLNILAGLNP+RSVS+TG+M ++  G
Subjt:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG

A0A6J1I6T4 transcription factor TCP14-like

1.7e-14

72.58

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Query:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG
        MSSGLHFMNF  PVTLVP QQ GS + GG+NSSSE H NILAGLNP+RSVSS+GVM  +  G
Subjt:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG

A0A6J1J9P7 transcription factor TCP14-like

1.9e-18

80.65

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Query:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG
        MSSGLHFMNF APV LVP QQFGSG+GGGNNSSSEGHLNILAGLNP+RSVS+TG+M ++  G
Subjt:  MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVG

SwissProt top hits

e value

%identity

Alignment

Q9C9L2 Transcription factor TCP15

4.4e-04

42.86

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Query:  SGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSE-GHLNILAGLN-PHRSVSSTGVMNRREVGR
        SG+H MNF AP+ L   Q   SG GGG     E  H  +LA LN  +R V+ TG  N  +  R
Subjt:  SGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSE-GHLNILAGLN-PHRSVSSTGVMNRREVGR

Arabidopsis top hits

e value

%identity

Alignment

AT1G69690.1 TCP family transcription factor

3.1e-05

42.86

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Query:  SGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSE-GHLNILAGLN-PHRSVSSTGVMNRREVGR
        SG+H MNF AP+ L   Q   SG GGG     E  H  +LA LN  +R V+ TG  N  +  R
Subjt:  SGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSE-GHLNILAGLN-PHRSVSSTGVMNRREVGR

Sequences

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CDS sequence

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ATGTCGAGTGGGTTGCATTTCATGAACTTTCTGGCCCCGGTGACGTTGGTTCCGTGTCAGCAATTCGGGTCAGGCTCCGGCGGAGGTAATAACAGTTCCAGTGAGGGGCA
CTTGAACATACTTGCAGGGCTGAATCCGCATCGGTCGGTGTCGAGCACGGGCGTAATGAACCGCAGGGAAGTGGGTCGCACTCACATCACGACAGCGGATGTTTTTTCGG
TAGGTTTCCGGCAATCTGTGTTCAGTCTGTACGGTCCGCTTTCCAGTCATTTGAACATGGAGATGTCTAGCTTGATCTCCATTAAGCTAAACTCTGCAAAGTTTCTGATC
TGGAAGTCTCAAGTTGTTCCATTGATTAAAAATCTCAACTTGGAGGATCATCTAACGAGAGATAATCCATACAAAGCCAAGATTGAGGGAGATGACAAAGTCAATTCGAT
GTACAACACGTGGAATAGGAATGATGGCCTACTCACTCCATGGATGTTACTAAGTCGCTTTGACCATTCATACCAACCTGATGATGTGCCAAAAGCACTTGCTGCACTAG
CCATCAATGATGAAATTGATCCTAACATCTATGCTGACACTGGAGCAACTACTCACATCATGACCGACACTGGTAATATCCCAAATTCCTACATATATACTGGTCATAAT
AAACTCTATGTTGGTGATGGGGAGAACAATGACCATAGGAGAATGTGCCCGCAAGAGGAGATAAAGGTTGGCGAAACAAAAGGAATTAAAAGCTGCAAGGTTGCGTCTGC
ATCTGGACCTGAAGATGTGAGCTGTCAAAGTAGAACACAAAGTAAATTGCGCCCGAGATGCGGCCGCAACTGGGCTTTCCGACAGAATTCCAAGATTCGCGGGATTTACA
CAGAATCATCTGAATATCCCCAATCCAGCATCAAATCTCCGAGGATCATGGATTCTTACCTTCCAAGGCTTTCTCACACTGATCTCAGTAGCAAACTTTACCTTCCATGG
TCTATAAAAGGGGACAAAGGTGCAAGAAGCAAGGGAGCTCGAGTGGCCAATACGCCGACTCAATTAGCTTATCATTCTGGGGACAAGACCGAATGGGGAGCTGAGAACAT
AATCACACAAGATGAAATTCACTCCTTCCCGACTTTAGGGAAGCAGATCAGTGTTCTCTTAAGTGGTGACTCCGAGTCTTGA

mRNA sequence

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Protein sequence

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MSSGLHFMNFLAPVTLVPCQQFGSGSGGGNNSSSEGHLNILAGLNPHRSVSSTGVMNRREVGRTHITTADVFSVGFRQSVFSLYGPLSSHLNMEMSSLISIKLNSAKFLI
WKSQVVPLIKNLNLEDHLTRDNPYKAKIEGDDKVNSMYNTWNRNDGLLTPWMLLSRFDHSYQPDDVPKALAALAINDEIDPNIYADTGATTHIMTDTGNIPNSYIYTGHN
KLYVGDGENNDHRRMCPQEEIKVGETKGIKSCKVASASGPEDVSCQSRTQSKLRPRCGRNWAFRQNSKIRGIYTESSEYPQSSIKSPRIMDSYLPRLSHTDLSSKLYLPW
SIKGDKGARSKGARVANTPTQLAYHSGDKTEWGAENIITQDEIHSFPTLGKQISVLLSGDSES

Lag0041908 (gene) of Sponge gourd (AG-4) v1 genome