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Lag0041922 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041922
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmyb domain protein 26
Genome locationchr13:31391980..31394550
RNA-Seq ExpressionLag0041922
SyntenyLag0041922
Gene Ontology termsNA
InterPro domainsIPR000408 - Regulator of chromosome condensation, RCC1
IPR009057 - Homeobox-like domain superfamily
IPR009091 - Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607956.1 RCC1 domain-containing protein RUG3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.3e-1571.93Show/hide
Query:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        ANTNFELGRGNK GGWEPK IP LE TP+IQIACGGYHSL LTG   V ++ +G  G
Subjt:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

XP_022133945.1 probable E3 ubiquitin-protein ligase HERC2 [Momordica charantia]4.4e-1675.44Show/hide
Query:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        ANTNFELGRGNKIGGWEPK IPCLE TP+IQIA GGYHSLALTG   V ++ +G  G
Subjt:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

XP_022940807.1 ultraviolet-B receptor UVR8 [Cucurbita moschata]8.3e-1571.93Show/hide
Query:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        ANTNFELGRGNK GGWEPK IP LE TP+IQIACGGYHSL LTG   V ++ +G  G
Subjt:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

XP_023524640.1 ultraviolet-B receptor UVR8 [Cucurbita pepo subsp. pepo]8.3e-1571.93Show/hide
Query:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        ANTNFELGRGNK GGWEPK IP LE TP+IQIACGGYHSL LTG   V ++ +G  G
Subjt:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

XP_038900002.1 RCC1 domain-containing protein RUG3, mitochondrial [Benincasa hispida]5.8e-1673.68Show/hide
Query:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        ANTNFELGRGNKIGGWEPK +P LE TP+IQIACGGYHSLALTG   V ++ +G  G
Subjt:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

TrEMBL top hitse value%identityAlignment
A0A0A0L358 Uncharacterized protein9.0e-1568.42Show/hide
Query:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        ANTNFELGRGN IGGWEPK +P LE TP+IQI CGGYHSL LTG   V ++ +G  G
Subjt:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

A0A1S3CLX9 ultraviolet-B receptor UVR85.3e-1570.18Show/hide
Query:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        ANTNFELGRGNKIGGWEPK +P LE TP+IQI CGGYHSLALT    V ++ +G  G
Subjt:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

A0A5A7VI46 Ultraviolet-B receptor UVR85.3e-1570.18Show/hide
Query:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        ANTNFELGRGNKIGGWEPK +P LE TP+IQI CGGYHSLALT    V ++ +G  G
Subjt:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

A0A6J1BWN2 probable E3 ubiquitin-protein ligase HERC22.1e-1675.44Show/hide
Query:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        ANTNFELGRGNKIGGWEPK IPCLE TP+IQIA GGYHSLALTG   V ++ +G  G
Subjt:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

A0A6J1FKN1 ultraviolet-B receptor UVR84.0e-1571.93Show/hide
Query:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        ANTNFELGRGNK GGWEPK IP LE TP+IQIACGGYHSL LTG   V ++ +G  G
Subjt:  ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

SwissProt top hitse value%identityAlignment
P20027 Myb-related protein Hv333.5e-0892.86Show/hide
Query:  RCGKSCRLRWINYLRPDLKRWMFSQQEE
        RCGKSCRLRWINYLRPDLKR  FSQQEE
Subjt:  RCGKSCRLRWINYLRPDLKRWMFSQQEE

Q8LPH6 Transcription factor MYB862.7e-0886.67Show/hide
Query:  QRCGKSCRLRWINYLRPDLKRWMFSQQEEA
        QRCGKSCRLRWINYLRPDLKR  FSQ EE+
Subjt:  QRCGKSCRLRWINYLRPDLKRWMFSQQEEA

Q9FJG9 RCC1 domain-containing protein RUG3, mitochondrial1.1e-1244.58Show/hide
Query:  IPLRSTRLGGFSL-------------ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        +P+ S   GGF               AN+N+ELGRG+ +GGWEP  +P LE   + QIACGGYHSLALT    V ++  G  G
Subjt:  IPLRSTRLGGFSL-------------ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

Q9LXV2 Transcription factor MYB462.1e-0869.05Show/hide
Query:  QGIFECHYKRTCQQRCGKSCRLRWINYLRPDLKRWMFSQQEE
        QG +    K    QRCGKSCRLRWINYLRPDLKR  FS QEE
Subjt:  QGIFECHYKRTCQQRCGKSCRLRWINYLRPDLKRWMFSQQEE

Q9SPG3 Transcription factor MYB267.1e-0975.68Show/hide
Query:  HYKRTCQQRCGKSCRLRWINYLRPDLKRWMFSQQEEA
        H    C QRCGKSCRLRWINYLRPDLKR  FS QE A
Subjt:  HYKRTCQQRCGKSCRLRWINYLRPDLKRWMFSQQEEA

Arabidopsis top hitse value%identityAlignment
AT3G13890.1 myb domain protein 265.0e-1075.68Show/hide
Query:  HYKRTCQQRCGKSCRLRWINYLRPDLKRWMFSQQEEA
        H    C QRCGKSCRLRWINYLRPDLKR  FS QE A
Subjt:  HYKRTCQQRCGKSCRLRWINYLRPDLKRWMFSQQEEA

AT5G12870.1 myb domain protein 461.5e-0969.05Show/hide
Query:  QGIFECHYKRTCQQRCGKSCRLRWINYLRPDLKRWMFSQQEE
        QG +    K    QRCGKSCRLRWINYLRPDLKR  FS QEE
Subjt:  QGIFECHYKRTCQQRCGKSCRLRWINYLRPDLKRWMFSQQEE

AT5G60870.1 Regulator of chromosome condensation (RCC1) family protein7.5e-1444.58Show/hide
Query:  IPLRSTRLGGFSL-------------ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        +P+ S   GGF               AN+N+ELGRG+ +GGWEP  +P LE   + QIACGGYHSLALT    V ++  G  G
Subjt:  IPLRSTRLGGFSL-------------ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

AT5G60870.2 Regulator of chromosome condensation (RCC1) family protein7.5e-1444.58Show/hide
Query:  IPLRSTRLGGFSL-------------ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        +P+ S   GGF               AN+N+ELGRG+ +GGWEP  +P LE   + QIACGGYHSLALT    V ++  G  G
Subjt:  IPLRSTRLGGFSL-------------ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG

AT5G60870.3 Regulator of chromosome condensation (RCC1) family protein7.5e-1444.58Show/hide
Query:  IPLRSTRLGGFSL-------------ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG
        +P+ S   GGF               AN+N+ELGRG+ +GGWEP  +P LE   + QIACGGYHSLALT    V ++  G  G
Subjt:  IPLRSTRLGGFSL-------------ANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGCTCGCTGGAGGCAGTGGCGGTTGAAGTGGTATTGATGGTGCTCGTGAGGGTGTTCGTTGCATTGCTCTTGGGGGTTTGTATTCCGTTGCGCTCAACTCGCTT
GGGCGGGTTTTCACTTGCAAACACCAACTTCGAGCTTGGTAGAGGTAATAAGATTGGTGGTTGGGAACCAAAGTCCATTCCTTGTCTTGAATATACACCCGTCATTCAGA
TAGCCTGTGGTGGATACCACTCACTTGCATTAACTGGTTATGAAGCCGTATTTACGTTTACATTTGGTCAACAAGGGATTTTCGAATGTCACTACAAGCGCACATGCCAA
CAAAGGTGTGGCAAAAGTTGCAGGTTGAGATGGATAAACTATTTGAGACCTGATTTGAAGAGATGGATGTTTTCACAGCAAGAGGAGGCCAAGGATAGGCTTCCATCCCT
AACCGAAGAAATATTGAGAATTGGAACTAATGATCTTTTATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGCTCGCTGGAGGCAGTGGCGGTTGAAGTGGTATTGATGGTGCTCGTGAGGGTGTTCGTTGCATTGCTCTTGGGGGTTTGTATTCCGTTGCGCTCAACTCGCTT
GGGCGGGTTTTCACTTGCAAACACCAACTTCGAGCTTGGTAGAGGTAATAAGATTGGTGGTTGGGAACCAAAGTCCATTCCTTGTCTTGAATATACACCCGTCATTCAGA
TAGCCTGTGGTGGATACCACTCACTTGCATTAACTGGTTATGAAGCCGTATTTACGTTTACATTTGGTCAACAAGGGATTTTCGAATGTCACTACAAGCGCACATGCCAA
CAAAGGTGTGGCAAAAGTTGCAGGTTGAGATGGATAAACTATTTGAGACCTGATTTGAAGAGATGGATGTTTTCACAGCAAGAGGAGGCCAAGGATAGGCTTCCATCCCT
AACCGAAGAAATATTGAGAATTGGAACTAATGATCTTTTATCCTAA
Protein sequenceShow/hide protein sequence
MKSSLEAVAVEVVLMVLVRVFVALLLGVCIPLRSTRLGGFSLANTNFELGRGNKIGGWEPKSIPCLEYTPVIQIACGGYHSLALTGYEAVFTFTFGQQGIFECHYKRTCQ
QRCGKSCRLRWINYLRPDLKRWMFSQQEEAKDRLPSLTEEILRIGTNDLLS