; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0041925 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041925
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:31478085..31478738
RNA-Seq ExpressionLag0041925
SyntenyLag0041925
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145060.1 uncharacterized protein LOC111014578 [Momordica charantia]9.2e-1732.84Show/hide
Query:  MVNLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTT
        M NL    +    NCLVC +++ETTDHALF+C RA+E+W IL PQ      +         Y +       F+ + VG W+IWNDRN     RQIP+   
Subjt:  MVNLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTT

Query:  RCEWIVDYLANFWKAN-PKGDPFVQQEEDIIN--LLSN------SKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLE
        R +WI+ Y+ +F   + P    F  QE+   N   + N      +    ++ DA+   +   +GIGIV + + G + A        S+ PL  E++A+ +
Subjt:  RCEWIVDYLANFWKAN-PKGDPFVQQEEDIIN--LLSN------SKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLE

Query:  G
        G
Subjt:  G

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]7.0e-1728.99Show/hide
Query:  CLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSE--EPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTTRCEWIVDYLANF
        C +C +  E+  HA F C RAR+IW  L P +T     + +   + W  L+E  EP  +     +  W IWNDRN+ +H +Q+     +CEW+  +L + 
Subjt:  CLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSE--EPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTTRCEWIVDYLANF

Query:  WKANPKG-DPFVQQEEDIINLL---SNSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRLARRLNIECITILS
         +A      P  Q     +      S+S    ++TDA+  G   S+  G +++     L A  ++      SPL  E   +LEG++ A   N   + + S
Subjt:  WKANPKG-DPFVQQEEDIINLL---SNSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRLARRLNIECITILS

Query:  DSLMLIK
        DSL+ I+
Subjt:  DSLMLIK

XP_030479133.1 uncharacterized protein LOC115696372 [Cannabis sativa]5.2e-1223.61Show/hide
Query:  NLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTTRC
        +L++  +     C +C    E+  HALF C  A+E+W      +  T      D     +  S    + FE I    W IW+DRNNF+H +++  P    
Subjt:  NLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTTRC

Query:  EWIVDYLANFWKANPKGDPFVQQEEDIINLLS----NSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRLARR
           V Y+  +        P         ++ S        F ++ DA++  + +  GIG++++   G +KA  +  ++ +    E+EA A+  G+  A+ 
Subjt:  EWIVDYLANFWKANPKGDPFVQQEEDIINLLS----NSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRLARR

Query:  LNIECITILSDSLMLI
          +    + +D LML+
Subjt:  LNIECITILSDSLMLI

XP_030497600.1 uncharacterized protein LOC115713257 [Cannabis sativa]8.1e-1325.57Show/hide
Query:  NLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPV---AVFERICVGAWSIWNDRNNFVHNRQIPNPT
        NL++  +     C +C    E+  HALF C  A+ +W     Q+  T   +   +KD  Y L    +   +  E++    W IW+DRNN++H +Q+ +P 
Subjt:  NLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPV---AVFERICVGAWSIWNDRNNFVHNRQIPNPT

Query:  TRCEWIVDYLANFWKANPKGDPFVQ----QEEDIINLLSNSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRL
                YLANF        P V         +  +        M+ DA++  + N  GIG++++   G + A  +   + +    E+EA A+  G++ 
Subjt:  TRCEWIVDYLANFWKANPKGDPFVQ----QEEDIINLLSNSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRL

Query:  ARRLNIECITILSDSLMLI
        A++L ++   + +D LML+
Subjt:  ARRLNIECITILSDSLMLI

XP_030502555.1 uncharacterized protein LOC115717715 [Cannabis sativa]2.1e-1325.11Show/hide
Query:  NLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPV---AVFERICVGAWSIWNDRNNFVHNRQIPNPT
        NL++  +     C +C    E+  HALF C  A+ +W     Q+      +   +KD  Y +    +   +  ER+    W IW+DRNNF+H +Q+  P 
Subjt:  NLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPV---AVFERICVGAWSIWNDRNNFVHNRQIPNPT

Query:  TRCEWIVDYLANFWKANPKGDPFVQQEEDIINLLS----NSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRL
                YLANF     +  P   +    +N +        +  M+ DA++  + +  G+G++++   G + A  +  ++ +    E+EA A+  G++L
Subjt:  TRCEWIVDYLANFWKANPKGDPFVQQEEDIINLLS----NSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRL

Query:  ARRLNIECITILSDSLMLI
        A +L ++   + +D LML+
Subjt:  ARRLNIECITILSDSLMLI

TrEMBL top hitse value%identityAlignment
A0A6J1CTE3 uncharacterized protein LOC1110145784.5e-1732.84Show/hide
Query:  MVNLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTT
        M NL    +    NCLVC +++ETTDHALF+C RA+E+W IL PQ      +         Y +       F+ + VG W+IWNDRN     RQIP+   
Subjt:  MVNLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTT

Query:  RCEWIVDYLANFWKAN-PKGDPFVQQEEDIIN--LLSN------SKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLE
        R +WI+ Y+ +F   + P    F  QE+   N   + N      +    ++ DA+   +   +GIGIV + + G + A        S+ PL  E++A+ +
Subjt:  RCEWIVDYLANFWKAN-PKGDPFVQQEEDIIN--LLSN------SKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLE

Query:  G
        G
Subjt:  G

A0A6J1DX30 uncharacterized protein LOC1110248743.4e-1728.99Show/hide
Query:  CLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSE--EPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTTRCEWIVDYLANF
        C +C +  E+  HA F C RAR+IW  L P +T     + +   + W  L+E  EP  +     +  W IWNDRN+ +H +Q+     +CEW+  +L + 
Subjt:  CLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSE--EPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTTRCEWIVDYLANF

Query:  WKANPKG-DPFVQQEEDIINLL---SNSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRLARRLNIECITILS
         +A      P  Q     +      S+S    ++TDA+  G   S+  G +++     L A  ++      SPL  E   +LEG++ A   N   + + S
Subjt:  WKANPKG-DPFVQQEEDIINLL---SNSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRLARRLNIECITILS

Query:  DSLMLIK
        DSL+ I+
Subjt:  DSLMLIK

A0A803NGI9 Uncharacterized protein7.9e-1428.9Show/hide
Query:  LWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSE-EPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTTRC
        LWN   P+   C +C    E+ +HALF C  A+++W +    +    L  +M   D    LS  +  +  E++    W +WNDRNNF+H +   +PT   
Subjt:  LWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSE-EPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTTRC

Query:  EWIVDYLANFWKANPKGDPF------VQQEEDIINLLSNSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRLA
           V Y  NF + +              Q   I   L   K   M+ DA+   + N  G+GI+++   G + A  +        P E+EA A+L G+  A
Subjt:  EWIVDYLANFWKANPKGDPF------VQQEEDIINLLSNSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRLA

Query:  RRLNIECITILSDSLMLI
         R N+      SDSL+L+
Subjt:  RRLNIECITILSDSLMLI

A0A803PKJ2 Uncharacterized protein1.3e-1125.34Show/hide
Query:  NLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMD--IKDRWYGLSEEPV---AVFERICVGAWSIWNDRNNFVHNRQIPN
        NL++  +     C +C    E+  HALF C  A+ +W     Q T   L  Q    +KD  Y +    +   +  ER+    W IW+DRNNF+H +Q+  
Subjt:  NLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMD--IKDRWYGLSEEPV---AVFERICVGAWSIWNDRNNFVHNRQIPN

Query:  PTTRCEWIVDYLANFWKANPKGDPFVQQEEDIINLLS----NSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGM
        P         YLANF        P        +N +        +  M+ DA++  + +  GIG++++   G +    +  ++ +    E+EA A+  G+
Subjt:  PTTRCEWIVDYLANFWKANPKGDPFVQQEEDIINLLS----NSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGM

Query:  RLARRLNIECITILSDSLMLI
        + A+ L ++   + +D +ML+
Subjt:  RLARRLNIECITILSDSLMLI

A0A803QGT2 Uncharacterized protein2.5e-1223.61Show/hide
Query:  NLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTTRC
        +L++  +     C +C    E+  HALF C  A+E+W      +  T      D     +  S    + FE I    W IW+DRNNF+H +++  P    
Subjt:  NLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTTRC

Query:  EWIVDYLANFWKANPKGDPFVQQEEDIINLLS----NSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRLARR
           V Y+  +        P         ++ S        F ++ DA++  + +  GIG++++   G +KA  +  ++ +    E+EA A+  G+  A+ 
Subjt:  EWIVDYLANFWKANPKGDPFVQQEEDIINLLS----NSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRLARR

Query:  LNIECITILSDSLMLI
          +    + +D LML+
Subjt:  LNIECITILSDSLMLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G25270.1 Ribonuclease H-like superfamily protein4.3e-0425Show/hide
Query:  NLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIW---AILHPQMTMTGLWEQMDIKDRWYG-LSEEPVAVFERICVGAWSIWNDRNNFVHNRQ
        NL   H+     C  C +E ET+ H  F C  A+++W    I H ++  TG+  +  ++      L+     +F       W +W  RN  V  ++
Subjt:  NLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIW---AILHPQMTMTGLWEQMDIKDRWYG-LSEEPVAVFERICVGAWSIWNDRNNFVHNRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAACCTGTGGAATCATCATTTACCAGTTATGGTGAACTGCCTAGTGTGCCATGAGGAGATGGAAACTACAGACCATGCATTGTTTCAGTGTTCGAGAGCTCGGGA
GATTTGGGCTATACTCCATCCACAAATGACCATGACGGGTCTTTGGGAACAAATGGATATCAAAGACCGATGGTATGGTCTTTCTGAAGAGCCTGTAGCGGTTTTTGAGC
GTATTTGTGTGGGGGCATGGTCAATTTGGAACGATAGAAATAACTTTGTTCATAATAGACAGATACCGAACCCAACGACTAGATGTGAATGGATTGTTGATTATCTAGCC
AATTTCTGGAAGGCTAATCCAAAAGGTGACCCTTTTGTTCAGCAAGAGGAAGATATCATTAATCTTTTATCAAATAGCAAAGAGTTTATTATGCACACCGATGCGTCTGT
TATGGGAAATCTGAATTCATCCGGAATTGGAATAGTTTTGCAAATCAAAGGAGGATTTTTAAAAGCGGTGCAGAATCTATCCTCCATGGTGAGCAATTCTCCTTTGGAAG
TGGAAGCAGTGGCAGTCCTTGAAGGAATGCGATTGGCTAGGAGGTTGAATATCGAGTGCATAACTATATTGTCCGACTCTTTGATGCTGATAAAATGTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAACCTGTGGAATCATCATTTACCAGTTATGGTGAACTGCCTAGTGTGCCATGAGGAGATGGAAACTACAGACCATGCATTGTTTCAGTGTTCGAGAGCTCGGGA
GATTTGGGCTATACTCCATCCACAAATGACCATGACGGGTCTTTGGGAACAAATGGATATCAAAGACCGATGGTATGGTCTTTCTGAAGAGCCTGTAGCGGTTTTTGAGC
GTATTTGTGTGGGGGCATGGTCAATTTGGAACGATAGAAATAACTTTGTTCATAATAGACAGATACCGAACCCAACGACTAGATGTGAATGGATTGTTGATTATCTAGCC
AATTTCTGGAAGGCTAATCCAAAAGGTGACCCTTTTGTTCAGCAAGAGGAAGATATCATTAATCTTTTATCAAATAGCAAAGAGTTTATTATGCACACCGATGCGTCTGT
TATGGGAAATCTGAATTCATCCGGAATTGGAATAGTTTTGCAAATCAAAGGAGGATTTTTAAAAGCGGTGCAGAATCTATCCTCCATGGTGAGCAATTCTCCTTTGGAAG
TGGAAGCAGTGGCAGTCCTTGAAGGAATGCGATTGGCTAGGAGGTTGAATATCGAGTGCATAACTATATTGTCCGACTCTTTGATGCTGATAAAATGTTATTAA
Protein sequenceShow/hide protein sequence
MVNLWNHHLPVMVNCLVCHEEMETTDHALFQCSRAREIWAILHPQMTMTGLWEQMDIKDRWYGLSEEPVAVFERICVGAWSIWNDRNNFVHNRQIPNPTTRCEWIVDYLA
NFWKANPKGDPFVQQEEDIINLLSNSKEFIMHTDASVMGNLNSSGIGIVLQIKGGFLKAVQNLSSMVSNSPLEVEAVAVLEGMRLARRLNIECITILSDSLMLIKCY