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Lag0041927 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0041927
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr13:31668867..31669189
RNA-Seq ExpressionLag0041927
SyntenyLag0041927
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]4.2e-0535.79Show/hide
Query:  MARDCAYRGSPMEDPNSHLKSFLDICGTDKA-GTGCNLFHLGALPLGM---------------------LCPGIFKEILPPAKTVKLRIEIGTFQ
        MAR+ A+RG   EDP+ HL+SFL+ICGT K  G   +   L   P  +                     L      +  PPAK+ +LR EIGTF+
Subjt:  MARDCAYRGSPMEDPNSHLKSFLDICGTDKA-GTGCNLFHLGALPLGM---------------------LCPGIFKEILPPAKTVKLRIEIGTFQ
XP_022157708.1 uncharacterized protein LOC111024361 [Momordica charantia]4.2e-0539.74Show/hide
Query:  MARDCAYRGSPMEDPNSHLKSFLDICGTDKA-GTGCNLFHLGALPLGM----LCPGIFKEILPPAKTVKLRIEIGTFQ
        M R+  +RG+  EDPN+HL  FLD+CGT K  G   +   L   PL +    +         PPAKT +LR EI +F+
Subjt:  MARDCAYRGSPMEDPNSHLKSFLDICGTDKA-GTGCNLFHLGALPLGM----LCPGIFKEILPPAKTVKLRIEIGTFQ
TrEMBL top hitse value%identityAlignment
A0A6J1DU19 uncharacterized protein LOC1110243612.0e-0539.74Show/hide
Query:  MARDCAYRGSPMEDPNSHLKSFLDICGTDKA-GTGCNLFHLGALPLGM----LCPGIFKEILPPAKTVKLRIEIGTFQ
        M R+  +RG+  EDPN+HL  FLD+CGT K  G   +   L   PL +    +         PPAKT +LR EI +F+
Subjt:  MARDCAYRGSPMEDPNSHLKSFLDICGTDKA-GTGCNLFHLGALPLGM----LCPGIFKEILPPAKTVKLRIEIGTFQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGAGATTGTGCTTACAGAGGATCACCCATGGAGGATCCAAATTCTCACCTGAAATCCTTCCTAGACATCTGTGGGACGGACAAAGCGGGGACTGGTTGCAATCT
ATTCCACCTGGGAGCATTACCACTTGGGATGCTTTGTCCAGGCATTTTTAAAGAAATTCTTCCTCCTGCCAAGACGGTCAAGCTGAGGATCGAGATTGGGACATTCCAGC
ACAGTTTGATGAGCAGCTGTTCGAGGCTTGGGAGCGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGAGATTGTGCTTACAGAGGATCACCCATGGAGGATCCAAATTCTCACCTGAAATCCTTCCTAGACATCTGTGGGACGGACAAAGCGGGGACTGGTTGCAATCT
ATTCCACCTGGGAGCATTACCACTTGGGATGCTTTGTCCAGGCATTTTTAAAGAAATTCTTCCTCCTGCCAAGACGGTCAAGCTGAGGATCGAGATTGGGACATTCCAGC
ACAGTTTGATGAGCAGCTGTTCGAGGCTTGGGAGCGTTTAA
Protein sequenceShow/hide protein sequence
MARDCAYRGSPMEDPNSHLKSFLDICGTDKAGTGCNLFHLGALPLGMLCPGIFKEILPPAKTVKLRIEIGTFQHSLMSSCSRLGSV