; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0042046 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042046
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr13:35278183..35279172
RNA-Seq ExpressionLag0042046
SyntenyLag0042046
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]2.4e-1230.27Show/hide
Query:  RFINDLARAKYQEML-RRDFLFERGF------GDDLPHFLRAGIANLGWSQFCAKRDPVNS--NIVQEFYANIDNAEEFQAIVRGVSVDWSPGAIN----
        +F+++ A  +Y+E +  R+ + E+GF          P F+   I + GW  FC  R P++    +V+EFYAN+ N  +    V  + + ++   IN    
Subjt:  RFINDLARAKYQEML-RRDFLFERGF------GDDLPHFLRAGIANLGWSQFCAKRDPVNS--NIVQEFYANIDNAEEFQAIVRGVSVDWSPGAIN----

Query:  ----------------SDQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL
                         +QL  V++ + I GAQW LS     T     L+  A  W  F+  RLLL+TH  T+SR+R IL++A+L
Subjt:  ----------------SDQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]3.1e-1227.96Show/hide
Query:  FINDLARAKYQEMLRRDFLFERGFGDDLPHFLRAGIANLG-----------WSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAIN---
        F+++ A+  YQ +  R   FE GF      F  A  ANLG           W +F     PVN+ IV+EFY+NI    +   +VRG+S+ ++P AIN   
Subjt:  FINDLARAKYQEMLRRDFLFERGFGDDLPHFLRAGIANLG-----------WSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAIN---

Query:  -----------------SDQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL
                          +    ++ ++ + G +W   + +++T     L      W  F+K +L+ T+H++TVS  R++L+ +IL
Subjt:  -----------------SDQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.1e-1331.89Show/hide
Query:  IRFINDLARAKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINS---
        ++F  + A  +Y+  ++ R    E+GF  D       LP F+   I    W QFCA  +     +V+EFYAN+ +  E    VRGV V WS  AIN+   
Subjt:  IRFINDLARAKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINS---

Query:  -----------------DQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL
                           L  V+  V + GA+W +S     T   + L   A  W  F+K  LL TTH  TVS+DR++L+ ++L
Subjt:  -----------------DQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.3e-1432.97Show/hide
Query:  IRFINDLARAKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINS---
        ++F  + A  +Y+  ++ R    E+GF  D       LP F+   I    W QFCA  +     +V+EFYAN+ + EE    VRGV V WS  AIN+   
Subjt:  IRFINDLARAKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINS---

Query:  -----------------DQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL
                           L  V+  V   GA+W +S     T   + L   A  W  F+K RLL TTH  TVS+DR++L+ ++L
Subjt:  -----------------DQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]9.0e-1228.26Show/hide
Query:  IRFINDLARAKYQEMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINS----
        ++F +  A  +Y+E ++       ++F+++     + P F+   I    W  FCA  +     +V+EFY N+ N ++    +RGV V  S  AIN+    
Subjt:  IRFINDLARAKYQEMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINS----

Query:  ----------------DQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL
                         +L  V+  V I GA+W +S     T   + L   A  W  F+K RLL TTH  TVS++ V L++++L
Subjt:  ----------------DQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.0e-1331.89Show/hide
Query:  IRFINDLARAKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINS---
        ++F  + A  +Y+  ++ R    E+GF  D       LP F+   I    W QFCA  +     +V+EFYAN+ +  E    VRGV V WS  AIN+   
Subjt:  IRFINDLARAKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINS---

Query:  -----------------DQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL
                           L  V+  V + GA+W +S     T   + L   A  W  F+K  LL TTH  TVS+DR++L+ ++L
Subjt:  -----------------DQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL

A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-1432.97Show/hide
Query:  IRFINDLARAKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINS---
        ++F  + A  +Y+  ++ R    E+GF  D       LP F+   I    W QFCA  +     +V+EFYAN+ + EE    VRGV V WS  AIN+   
Subjt:  IRFINDLARAKYQEMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINS---

Query:  -----------------DQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL
                           L  V+  V   GA+W +S     T   + L   A  W  F+K RLL TTH  TVS+DR++L+ ++L
Subjt:  -----------------DQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL

A0A2P5DAQ2 Uncharacterized protein4.3e-1228.26Show/hide
Query:  IRFINDLARAKYQEMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINS----
        ++F +  A  +Y+E ++       ++F+++     + P F+   I    W  FCA  +     +V+EFY N+ N ++    +RGV V  S  AIN+    
Subjt:  IRFINDLARAKYQEMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINS----

Query:  ----------------DQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL
                         +L  V+  V I GA+W +S     T   + L   A  W  F+K RLL TTH  TVS++ V L++++L
Subjt:  ----------------DQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL

A0A6A2ZUE4 Uncharacterized protein1.5e-1227.96Show/hide
Query:  FINDLARAKYQEMLRRDFLFERGFGDDLPHFLRAGIANLG-----------WSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAIN---
        F+++ A+  YQ +  R   FE GF      F  A  ANLG           W +F     PVN+ IV+EFY+NI    +   +VRG+S+ ++P AIN   
Subjt:  FINDLARAKYQEMLRRDFLFERGFGDDLPHFLRAGIANLG-----------WSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAIN---

Query:  -----------------SDQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL
                          +    ++ ++ + G +W   + +++T     L      W  F+K +L+ T+H++TVS  R++L+ +IL
Subjt:  -----------------SDQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL

W9RBS1 Uncharacterized protein1.1e-1230.27Show/hide
Query:  RFINDLARAKYQEML-RRDFLFERGF------GDDLPHFLRAGIANLGWSQFCAKRDPVNS--NIVQEFYANIDNAEEFQAIVRGVSVDWSPGAIN----
        +F+++ A  +Y+E +  R+ + E+GF          P F+   I + GW  FC  R P++    +V+EFYAN+ N  +    V  + + ++   IN    
Subjt:  RFINDLARAKYQEML-RRDFLFERGF------GDDLPHFLRAGIANLGWSQFCAKRDPVNS--NIVQEFYANIDNAEEFQAIVRGVSVDWSPGAIN----

Query:  ----------------SDQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL
                         +QL  V++ + I GAQW LS     T     L+  A  W  F+  RLLL+TH  T+SR+R IL++A+L
Subjt:  ----------------SDQLNAVVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGTATTTCTTCTTCTTCTTCCTTCGTTGCTTTTCTCTATAAAAACCCTTGAGTCTTCCATGGCAAAGACGAGAGCAAACAAAGAAAGAGACAATGAGGAGGAAGC
AGTACCGGTTAGTCCTGAGGTACCGAAAGCAAAAACAAAGAAGAAGAGAACACCAGAAGAGAAGGAAGCCAAGAGGCGAAGGAGACAACAGAGGAATGAAGAACAAGAAA
CTATCCAAGAGGCAATAGAGGATGTTGCTGCCTCATTAGAAGAAGGAAATCCGAAAGAGTCTGAGATGAAAAATCCAGGAAAGGTTGACGAGGTTCAAGATGAAGACAGA
GGCAAAGGAATTGCTGAAGCATCGGATGAACCTGTGGAGGGGCCTTTTATCCGCTTCATCAATGACCTTGCTCGAGCAAAATACCAAGAGATGCTACGAAGGGATTTCTT
GTTCGAAAGAGGGTTTGGTGATGATCTACCCCATTTCTTAAGAGCAGGGATTGCGAATCTTGGGTGGAGTCAGTTCTGTGCGAAGCGAGACCCAGTGAATTCGAATATTG
TTCAAGAATTCTATGCGAATATTGATAATGCAGAGGAATTTCAGGCCATAGTTCGAGGAGTATCTGTTGATTGGAGCCCAGGGGCTATCAACTCTGATCAGTTGAATGCG
GTGGTCCGAGAGGTTGGAATTGATGGGGCTCAGTGGAGGCTATCTAAGACGGAGAAACGCACGTTTCAAGCTGCCTATCTAAAGAGTGAAGCCAATACTTGGTTGGGCTT
CATCAAGCTGCGTTTGCTGCTGACTACGCATGATTCAACAGTGTCTCGCGACCGAGTGATTCTGATATTCGCTATTCTTGATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGTATTTCTTCTTCTTCTTCCTTCGTTGCTTTTCTCTATAAAAACCCTTGAGTCTTCCATGGCAAAGACGAGAGCAAACAAAGAAAGAGACAATGAGGAGGAAGC
AGTACCGGTTAGTCCTGAGGTACCGAAAGCAAAAACAAAGAAGAAGAGAACACCAGAAGAGAAGGAAGCCAAGAGGCGAAGGAGACAACAGAGGAATGAAGAACAAGAAA
CTATCCAAGAGGCAATAGAGGATGTTGCTGCCTCATTAGAAGAAGGAAATCCGAAAGAGTCTGAGATGAAAAATCCAGGAAAGGTTGACGAGGTTCAAGATGAAGACAGA
GGCAAAGGAATTGCTGAAGCATCGGATGAACCTGTGGAGGGGCCTTTTATCCGCTTCATCAATGACCTTGCTCGAGCAAAATACCAAGAGATGCTACGAAGGGATTTCTT
GTTCGAAAGAGGGTTTGGTGATGATCTACCCCATTTCTTAAGAGCAGGGATTGCGAATCTTGGGTGGAGTCAGTTCTGTGCGAAGCGAGACCCAGTGAATTCGAATATTG
TTCAAGAATTCTATGCGAATATTGATAATGCAGAGGAATTTCAGGCCATAGTTCGAGGAGTATCTGTTGATTGGAGCCCAGGGGCTATCAACTCTGATCAGTTGAATGCG
GTGGTCCGAGAGGTTGGAATTGATGGGGCTCAGTGGAGGCTATCTAAGACGGAGAAACGCACGTTTCAAGCTGCCTATCTAAAGAGTGAAGCCAATACTTGGTTGGGCTT
CATCAAGCTGCGTTTGCTGCTGACTACGCATGATTCAACAGTGTCTCGCGACCGAGTGATTCTGATATTCGCTATTCTTGATCCTTGA
Protein sequenceShow/hide protein sequence
MFVFLLLLPSLLFSIKTLESSMAKTRANKERDNEEEAVPVSPEVPKAKTKKKRTPEEKEAKRRRRQQRNEEQETIQEAIEDVAASLEEGNPKESEMKNPGKVDEVQDEDR
GKGIAEASDEPVEGPFIRFINDLARAKYQEMLRRDFLFERGFGDDLPHFLRAGIANLGWSQFCAKRDPVNSNIVQEFYANIDNAEEFQAIVRGVSVDWSPGAINSDQLNA
VVREVGIDGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLLTTHDSTVSRDRVILIFAILDP