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Lag0042048 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042048
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr13:35386995..35387564
RNA-Seq ExpressionLag0042048
SyntenyLag0042048
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030929385.1 uncharacterized protein LOC115955407 [Quercus lobata]8.0e-3346.01Show/hide
Query:  ETKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF-GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIG
        ETK      ++ K S+ + NG  +PS G+ GGL LLW+K+++V + S+S+ HIDAI+ +  GF  R +GFYGNP+  +R  S  +++ LS K  L WL  
Subjt:  ETKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF-GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIG

Query:  SDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR
         +FNEIV  SEK GGAR++ RQMD  RE IN C+  D G+ G +FTW   +  R+++Y RLDR
Subjt:  SDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR

XP_030946004.1 uncharacterized protein LOC115970518 [Quercus lobata]1.4e-3248.48Show/hide
Query:  METKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF--GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWL
        METK + S+ D IKR +  + G  VPS  + GGL LLWK  L V I +YS  HIDAI+ +  G    RF+ FYG+PET KR  S  ++E LS++ DL W+
Subjt:  METKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF--GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWL

Query:  IGSDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR
           D+NEI+   EK+GG  +   QM + RE +NRC+LRD GY G+ FTW R    R  V ERLDR
Subjt:  IGSDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR

XP_030957478.1 uncharacterized protein LOC115979567 [Quercus lobata]6.1e-3347.85Show/hide
Query:  ETKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF-GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIG
        +TK  ++  DK K S+ + NG  VPS G+ GGL LLW+KD+ V + SYS+ HIDAI+ +  GF  R +GFYGNPE  +R  S +++  L+ K  L WL  
Subjt:  ETKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF-GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIG

Query:  SDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR
         DFNEIV  +EK GGAR++ +QMD  RE IN C+  D G+ G +FTW   +  R ++Y RLDR
Subjt:  SDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR

XP_030958760.1 uncharacterized protein LOC115980671 [Quercus lobata]6.1e-3346.63Show/hide
Query:  ETKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF-GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIG
        ETK      ++ K S+ + NG  +PS G+ GGL LLW+K+++V + S+S+ HIDAI+ +  GF  R +GFYGNPE  +R  S  +++ LS K  L WL  
Subjt:  ETKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF-GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIG

Query:  SDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR
         DFNEIV  SEK GGAR++ RQMD  RE I+ C+  D G+ G +FTW   +  R+++Y RLDR
Subjt:  SDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR

XP_030970961.1 uncharacterized protein LOC115991405 [Quercus lobata]8.0e-3346.63Show/hide
Query:  ETKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF-GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIG
        ETK      ++ K S+ + NG  +PS G+ GGL LLW+K+++V + S+S+ HIDAI+ +  GF  R +GFYGNPE  +R  S  +++ LS K  L WL  
Subjt:  ETKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF-GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIG

Query:  SDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR
         DFNEIV  SEK GGAR++ RQMD  RE I+ C+  D G+ G +FTW   +  R+++Y RLDR
Subjt:  SDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR

TrEMBL top hitse value%identityAlignment
A0A5B6U6G4 Reverse transcriptase1.1e-3041.42Show/hide
Query:  METKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKK--THGFGRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWL
        METK +    D+++RS  + NG +V ++G  GGL L W+ D+ V + SYS+ HID +IK+       RF+GFYG+P    + +  N++E+LS+  D  WL
Subjt:  METKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKK--THGFGRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWL

Query:  IGSDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDRYFLN
        +  DFNEI+   EK+GG  ++PR+M+  R+T+  C L D G+SG  FTW R       + ERLDR   N
Subjt:  IGSDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDRYFLN

A0A5C7I4W9 RNase H domain-containing protein2.3e-3045.96Show/hide
Query:  KCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF-GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIGSD
        K    +  KI+  L YE GF V S G+ GGLLLLWK    V + SYS GHIDA I + +G   RFSG YG+P    R  +  +M +L E D+L W+ G D
Subjt:  KCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF-GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIGSD

Query:  FNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR
        FNE++  SEK GG+ K  R +   R+ ++ C+  D G+SG KFTW   R  R+ V ERLDR
Subjt:  FNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR

A0A7N2N7H5 Uncharacterized protein1.2e-3147.27Show/hide
Query:  METKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHG--FGRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWL
        +ETK   S+   IK  L+ + G  VPS  +GGGL+LLW+    V + ++S  HIDA++ + HG    RF+GFYG+PET KR  S  ++E+LS++ DL W+
Subjt:  METKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHG--FGRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWL

Query:  IGSDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR
           DFNEI+   EK GG  +   QM   RET+NRC LRD GY G+ FTW R    R  V ERLDR
Subjt:  IGSDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDR

A0A7N2R7P6 Uncharacterized protein1.9e-3246.15Show/hide
Query:  METKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHG--FGRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWL
        METK   ++ + IKR +  ++G  VPS+ +GGGL L+WK  L V   +YS  HID I+ +  G    RF+GFYGNPE  KR  S +++  LS + DL W+
Subjt:  METKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHG--FGRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWL

Query:  IGSDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDRYFLN
        I  DFNE++  +EK+GG  +   QM L R+TIN C+LRD GY G+ FTW R    +  V ERLDR F++
Subjt:  IGSDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDRYFLN

A0A803P3X8 Uncharacterized protein1.5e-2944.91Show/hide
Query:  ETKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF-GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIG
        ETK NE+  ++I+  L Y+  F V + GK GGL LLWK   +V I SY+  HIDA+++   GF  RF+GFYG+P+   R FS  +MEKL    + AW+ G
Subjt:  ETKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGF-GRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIG

Query:  SDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDRYFLN
         DFNEIV+ SEKKGG  K   QM   R  I+ C  ++    G +FTW   R  +  V+E+LDR   N
Subjt:  SDFNEIVEDSEKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDRYFLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTAAGTGTAACGAGAGCAAGTGTGACAAAATTAAAAGATCGTTGAACTATGAGAATGGGTTTAGTGTTCCTAGCAAGGGCAAAGGTGGTGGATTATTGTTGTT
ATGGAAAAAGGATTTGGATGTGCGTATTGCTTCTTATTCCGAGGGGCATATAGATGCCATTATAAAAAAAACGCATGGGTTTGGGAGATTTTCAGGCTTCTATGGTAACC
CAGAAACAGAAAAACGTCACTTCTCCAAGAACATTATGGAGAAGCTGAGCGAGAAGGACGACTTGGCTTGGTTAATAGGCAGTGACTTTAATGAGATTGTAGAGGACTCT
GAGAAAAAAGGTGGAGCTAGAAAGAACCCGAGGCAAATGGACCTTTCCAGAGAAACAATAAATCGTTGTAAACTTAGGGATGGGGGCTACTCTGGAAATAAATTCACATG
GAGAAGGAGCAGAAACAAAAGGAACCAAGTTTATGAAAGACTTGATAGATATTTTCTAAACATCTTCAAGCATCATGGTCATCCCAAGGGTGCGTACACTCTTCTGGGAA
AAAGGCTTGGGGAGGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTAAGTGTAACGAGAGCAAGTGTGACAAAATTAAAAGATCGTTGAACTATGAGAATGGGTTTAGTGTTCCTAGCAAGGGCAAAGGTGGTGGATTATTGTTGTT
ATGGAAAAAGGATTTGGATGTGCGTATTGCTTCTTATTCCGAGGGGCATATAGATGCCATTATAAAAAAAACGCATGGGTTTGGGAGATTTTCAGGCTTCTATGGTAACC
CAGAAACAGAAAAACGTCACTTCTCCAAGAACATTATGGAGAAGCTGAGCGAGAAGGACGACTTGGCTTGGTTAATAGGCAGTGACTTTAATGAGATTGTAGAGGACTCT
GAGAAAAAAGGTGGAGCTAGAAAGAACCCGAGGCAAATGGACCTTTCCAGAGAAACAATAAATCGTTGTAAACTTAGGGATGGGGGCTACTCTGGAAATAAATTCACATG
GAGAAGGAGCAGAAACAAAAGGAACCAAGTTTATGAAAGACTTGATAGATATTTTCTAAACATCTTCAAGCATCATGGTCATCCCAAGGGTGCGTACACTCTTCTGGGAA
AAAGGCTTGGGGAGGCCTAG
Protein sequenceShow/hide protein sequence
METKCNESKCDKIKRSLNYENGFSVPSKGKGGGLLLLWKKDLDVRIASYSEGHIDAIIKKTHGFGRFSGFYGNPETEKRHFSKNIMEKLSEKDDLAWLIGSDFNEIVEDS
EKKGGARKNPRQMDLSRETINRCKLRDGGYSGNKFTWRRSRNKRNQVYERLDRYFLNIFKHHGHPKGAYTLLGKRLGEA