; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0042050 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042050
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr13:35429621..35430253
RNA-Seq ExpressionLag0042050
SyntenyLag0042050
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]8.8e-4158.7Show/hide
Query:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +K + +SD+YTGP+TRS S+GI I+      A+A  I K + ES K  +  K+NPL+      S +     +PDVMSVMMADV  +  MAEME
Subjt:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGPT
        RK+NLLMK VDERD EIA LK Q+Q RE AES QTP    +DKGK VV E+QP Q S SVASLSV QLQDMI NSIRAQYGGP+
Subjt:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGPT

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]3.4e-4058.15Show/hide
Query:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +K + +SD+YTGP+TRS S+GI I+      A+A  I K + ES K  +  K+NPL+      S +     +PDVMSVMMADV  +  MAEME
Subjt:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGPT
        RK+NLLMK VDERD EIA LK Q+Q RE AES QTP    +DKGK VV E+QP Q S SVASLSV QLQDMI +SIRAQYGGP+
Subjt:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGPT

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]3.4e-4058.15Show/hide
Query:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +K + +SD+YTGP+TRS S+GI I+      A+A  I K + ES K  +  K+NPL+      S +     +PDVMSVMMADV  +  MAEME
Subjt:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGPT
        RK+NLLMK VDERD EIA LK Q+Q RE AES QTP    +DKGK VV E+QP Q S SVASLSV QLQDMI +SIRAQYGGP+
Subjt:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGPT

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]3.4e-4058.15Show/hide
Query:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +K + +SD+YTGP+TRS S+GI I+      A+A  I K + ES K  +  K+NPL+      S +     +PDVMSVMMADV  +  MAEME
Subjt:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGPT
        RK+NLLMK VDERD EIA LK Q+Q RE AES QTP    +DKGK VV E+QP Q S SVASLSV QLQDMI +SIRAQYGGP+
Subjt:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGPT

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]8.8e-4158.7Show/hide
Query:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +K + +SD+YTGP+TRS S+GI I+      A+A  I K + ES K  +  K+NPL+      S +     +PDVMSVMMADV  +  MAEME
Subjt:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGPT
        RK+NLLMK VDERD EIA LK Q+Q RE AES QTP    +DKGK VV E+QP Q S SVASLSV QLQDMI NSIRAQYGGP+
Subjt:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGPT

TrEMBL top hitse value%identityAlignment
A0A5A7TFN2 Ty3-gypsy retrotransposon protein8.3e-3753.55Show/hide
Query:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +  + +SD+YTGP+TRS S+GI  ++D     VA RI K + ES K  +  K+N L+++    S + K   +PDV SVMMAD+  +  M EME
Subjt:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGP
        RK+N LMKAV+ERD EI   + Q++ RE AES QTP     DKGK V+ E+QP Q S SVASLSV QLQDMI NSI+AQYGGP
Subjt:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGP

A0A5A7UF60 Ty3-gypsy retrotransposon protein1.4e-3654.4Show/hide
Query:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KK  +    +SD+YTGP+TRS S+GI I+E      V   I K + ES K  +  K NPL+++    S   K   +PDVMSVMMAD+  +  MAEME
Subjt:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGG
        +K+N LMKAV+ERD EI  L+ Q++ RE AES QTP     DKGK VV E+QP Q S SVASLS+ QLQDMI NSIRAQYGG
Subjt:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGG

A0A5A7VCU1 Ty3-gypsy retrotransposon protein6.8e-3950.72Show/hide
Query:  CGQIGTPSGTISTSHLFLLFKDPTNVMAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQP
        C QIGTPSGT       L  K     MA KKA ++ + +SD YTGP+TR+ S+GI  ++D     V   I K + ES K  +  K+N L+++    S + 
Subjt:  CGQIGTPSGTISTSHLFLLFKDPTNVMAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQP

Query:  KDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMN
        K   +PDVMSVMM D+  +  MAEMERK+N LMK V+ERD EI  L+ Q+Q RE  ES QT      DKGK VV E+QP Q S SVASLSV QLQ+MI N
Subjt:  KDTLNPDVMSVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMN

Query:  SIRAQYGGP
        S RAQYGGP
Subjt:  SIRAQYGGP

A0A5D3BY54 Ty3-gypsy retrotransposon protein6.8e-3955.74Show/hide
Query:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KKA +  + +S++YTGP+TRS S+GI  ++D     VA  I K + ES K  +  K+NPL+++   +S + K   +PDVMSVMMAD+  +  MAEME
Subjt:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGP
        RK+N LMKAV+ERD EI  L+ Q++ RE AES QTP     DKGK VV E+QP Q S SVASLSV QLQDMI NSIRAQYGGP
Subjt:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGP

A0A5D3CD35 Ty3-gypsy retrotransposon protein1.7e-3450.82Show/hide
Query:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME
        MA KK  +  + +SD+YTGP+T S S+GI  ++D     VA  I K + ES K  +  K+NPL+++    S + K   +PDVM VMMAD+  +  MA+ME
Subjt:  MAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVMSVMMADVDQDERMAEME

Query:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGP
        +K+N LMKA++E D EI  L+ Q++ RE AES QTP     DKGK VV ++QP Q S S+ASLSV +LQDMI NSIRAQYGGP
Subjt:  RKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQP-QHSASVASLSVHQLQDMIMNSIRAQYGGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGGACAAATTGGCACGCCCAGTGGGACCATCTCTACCTCTCATCTCTTTCTCTTGTTTAAAGATCCAACCAACGTGATGGCACCAAAGAAAGCTCCCGCAAAGAT
TACCACATCAAGCGACTCTTACACTGGTCCTGTCACTCGTAGTTGTTCCCAAGGAATTGAGATCAAGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGGATCTCAAAGC
TGATCGAAGAATCCTCTAAGGATAAGGTTGCATTCAAAGACAACCCACTGTTCGAATCTGTCGTTCCAACATCTAAGCAACCAAAGGATACACTAAATCCTGATGTGATG
TCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGGAAACTCAATCTCTTAATGAAGGCAGTTGATGAGAGAGATCTTGAGATTGCCTATTT
GAAGAACCAGCTGCAGAATCGAGAAGTGGCTGAGTCTCGCCAGACCCCTGCTGCAGGAAAGAATGATAAAGGGAAGGCTGTCGTGCACGAGGATCAGCCGCAACACTCTG
CATCAGTTGCCTCTTTGTCTGTCCATCAACTACAAGACATGATCATGAATTCCATCAGGGCTCAGTATGGTGGACCCACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGGACAAATTGGCACGCCCAGTGGGACCATCTCTACCTCTCATCTCTTTCTCTTGTTTAAAGATCCAACCAACGTGATGGCACCAAAGAAAGCTCCCGCAAAGAT
TACCACATCAAGCGACTCTTACACTGGTCCTGTCACTCGTAGTTGTTCCCAAGGAATTGAGATCAAGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGGATCTCAAAGC
TGATCGAAGAATCCTCTAAGGATAAGGTTGCATTCAAAGACAACCCACTGTTCGAATCTGTCGTTCCAACATCTAAGCAACCAAAGGATACACTAAATCCTGATGTGATG
TCCGTCATGATGGCTGATGTAGACCAGGATGAAAGAATGGCAGAGATGGAAAGGAAACTCAATCTCTTAATGAAGGCAGTTGATGAGAGAGATCTTGAGATTGCCTATTT
GAAGAACCAGCTGCAGAATCGAGAAGTGGCTGAGTCTCGCCAGACCCCTGCTGCAGGAAAGAATGATAAAGGGAAGGCTGTCGTGCACGAGGATCAGCCGCAACACTCTG
CATCAGTTGCCTCTTTGTCTGTCCATCAACTACAAGACATGATCATGAATTCCATCAGGGCTCAGTATGGTGGACCCACTTAA
Protein sequenceShow/hide protein sequence
MCGQIGTPSGTISTSHLFLLFKDPTNVMAPKKAPAKITTSSDSYTGPVTRSCSQGIEIKEDHTPLAVASRISKLIEESSKDKVAFKDNPLFESVVPTSKQPKDTLNPDVM
SVMMADVDQDERMAEMERKLNLLMKAVDERDLEIAYLKNQLQNREVAESRQTPAAGKNDKGKAVVHEDQPQHSASVASLSVHQLQDMIMNSIRAQYGGPT