; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0042056 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042056
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr13:35602238..35603048
RNA-Seq ExpressionLag0042056
SyntenyLag0042056
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0016020 - membrane (cellular component)
GO:0016301 - kinase activity (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136882.1 dr1-associated corepressor homolog isoform X1 [Momordica charantia]8.8e-0732Show/hide
Query:  LAQENRIERHSSFNSDGSLPSVNLTTQ-----------GQSKQHSHHSSPNHSDTNHRGRNQGPNS--------------------------NSNGPVSL
        L+ E R ER +S N+DG+LPSVNLT Q           GQ     ++ S N  + N R RN   N+                            NG   +
Subjt:  LAQENRIERHSSFNSDGSLPSVNLTTQ-----------GQSKQHSHHSSPNHSDTNHRGRNQGPNS--------------------------NSNGPVSL

Query:  QSSSITGQNSS-------------------QPS----LQALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAG-SQWQNPTPRQ
        Q     G NSS                   QP+    + A   Q D N++  W+PDSGA+NHVT+ F N +  +EY  DN+V + NG G S W + TPR+
Subjt:  QSSSITGQNSS-------------------QPS----LQALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAG-SQWQNPTPRQ

XP_022136883.1 dr1-associated corepressor homolog isoform X2 [Momordica charantia]4.4e-0631.66Show/hide
Query:  LAQENRIERHSSFNSDGSLPSVNLTTQ-----------GQSKQHSHHSSPNHSDTNHRGRNQGPNS--------------------------NSNGPVSL
        L+ E R ER +S N+DG+LPSVNLT Q           GQ     ++ S N  + N R RN   N+                            NG   +
Subjt:  LAQENRIERHSSFNSDGSLPSVNLTTQ-----------GQSKQHSHHSSPNHSDTNHRGRNQGPNS--------------------------NSNGPVSL

Query:  QSSSITGQNSS-------------------QPS----LQALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAGSQWQNPTPRQ
        Q     G NSS                   QP+    + A   Q D N++  W+PDSGA+NHVT+ F N +  +EY  DN+V + NG  S W + TPR+
Subjt:  QSSSITGQNSS-------------------QPS----LQALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAGSQWQNPTPRQ

XP_022152240.1 uncharacterized protein LOC111020007 [Momordica charantia]4.1e-2047.24Show/hide
Query:  NRIERHSSFNSDGSLPSVNLTTQGQSKQHS-HHSSPNHSDTNHRGRN-----------------------------------QGPNSNSNGPVSLQSSSI
        +RI+ HSS NSDGSLPSVNLTTQ  + Q S   SS + +D N  GRN                                   QG N+NS  P S Q S  
Subjt:  NRIERHSSFNSDGSLPSVNLTTQGQSKQHS-HHSSPNHSDTNHRGRN-----------------------------------QGPNSNSNGPVSLQSSSI

Query:  TGQNSSQPSLQALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAGSQ
         G   S     ALTLQHDLNKENQWFPDSG SNHV ++ AN    +EYL DNKV + NGAGSQ
Subjt:  TGQNSSQPSLQALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAGSQ

XP_022154487.1 uncharacterized protein LOC111021757 [Momordica charantia]5.0e-1033.62Show/hide
Query:  IGGDSKPLTSKETLRKGRRPLRVAMTLRQLAQENRIERHSSFNSDGSLPSVNLTTQGQSKQHSHHSS----PNHSDTNHRGRNQ----------------
        +G +   + S  T R   + L+   +L  L QE R ER +  NSDGSLPSVNLT    SK+++ H S    P+ S+ + RGR                  
Subjt:  IGGDSKPLTSKETLRKGRRPLRVAMTLRQLAQENRIERHSSFNSDGSLPSVNLTTQGQSKQHSHHSS----PNHSDTNHRGRNQ----------------

Query:  ------------------------GPNSNSN--GPVSLQS------------SSITGQ------NSSQPS-LQALTLQHDLNKENQWFPDSGASNHVTNE
                                GPN N N   P    S            SS   Q      NS+ PS +QAL +  D N+++ W+ DSG +NHVTNE
Subjt:  ------------------------GPNSNSN--GPVSLQS------------SSITGQ------NSSQPS-LQALTLQHDLNKENQWFPDSGASNHVTNE

Query:  FANFSFGSEYLRDNKVHVSNGAGSQ-WQNPTPRQT
        F NFS GSEY  D K+ V NG G Q W   + R++
Subjt:  FANFSFGSEYLRDNKVHVSNGAGSQ-WQNPTPRQT

XP_022158089.1 uncharacterized protein LOC111024658 [Momordica charantia]7.2e-0933.64Show/hide
Query:  IGGDSKPLTSKETLRKGRRPLRVA-MTLRQLAQENRIERHSSFNSDGSLP--SVNLTTQ--GQSKQH---SHHSSPNH------SDTNHRG-----RNQG
        +G + +   S  T++KG  PL +  +T   L+ + RIE+  S   D +LP  S+NL  Q  GQ+ Q+   S++S+ NH      S+ N+RG     RN G
Subjt:  IGGDSKPLTSKETLRKGRRPLRVA-MTLRQLAQENRIERHSSFNSDGSLP--SVNLTTQ--GQSKQH---SHHSSPNH------SDTNHRG-----RNQG

Query:  PNSNSNGPVSLQ---------------SSSITGQN--------SSQPSLQ-----ALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHV
           NS   +  Q               +SS+  QN        SS P  Q     A+ +  D+NK+  W+PDSGA+NHVT++  N S  +E      ++ 
Subjt:  PNSNSNGPVSLQ---------------SSSITGQN--------SSQPSLQ-----ALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHV

Query:  SNGAG-SQWQNPTPRQT
        +NGAG S W N TPR+T
Subjt:  SNGAG-SQWQNPTPRQT

TrEMBL top hitse value%identityAlignment
A0A6J1C6N9 dr1-associated corepressor homolog isoform X14.3e-0732Show/hide
Query:  LAQENRIERHSSFNSDGSLPSVNLTTQ-----------GQSKQHSHHSSPNHSDTNHRGRNQGPNS--------------------------NSNGPVSL
        L+ E R ER +S N+DG+LPSVNLT Q           GQ     ++ S N  + N R RN   N+                            NG   +
Subjt:  LAQENRIERHSSFNSDGSLPSVNLTTQ-----------GQSKQHSHHSSPNHSDTNHRGRNQGPNS--------------------------NSNGPVSL

Query:  QSSSITGQNSS-------------------QPS----LQALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAG-SQWQNPTPRQ
        Q     G NSS                   QP+    + A   Q D N++  W+PDSGA+NHVT+ F N +  +EY  DN+V + NG G S W + TPR+
Subjt:  QSSSITGQNSS-------------------QPS----LQALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAG-SQWQNPTPRQ

A0A6J1C8R2 dr1-associated corepressor homolog isoform X22.1e-0631.66Show/hide
Query:  LAQENRIERHSSFNSDGSLPSVNLTTQ-----------GQSKQHSHHSSPNHSDTNHRGRNQGPNS--------------------------NSNGPVSL
        L+ E R ER +S N+DG+LPSVNLT Q           GQ     ++ S N  + N R RN   N+                            NG   +
Subjt:  LAQENRIERHSSFNSDGSLPSVNLTTQ-----------GQSKQHSHHSSPNHSDTNHRGRNQGPNS--------------------------NSNGPVSL

Query:  QSSSITGQNSS-------------------QPS----LQALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAGSQWQNPTPRQ
        Q     G NSS                   QP+    + A   Q D N++  W+PDSGA+NHVT+ F N +  +EY  DN+V + NG  S W + TPR+
Subjt:  QSSSITGQNSS-------------------QPS----LQALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAGSQWQNPTPRQ

A0A6J1DDD5 uncharacterized protein LOC1110200072.0e-2047.24Show/hide
Query:  NRIERHSSFNSDGSLPSVNLTTQGQSKQHS-HHSSPNHSDTNHRGRN-----------------------------------QGPNSNSNGPVSLQSSSI
        +RI+ HSS NSDGSLPSVNLTTQ  + Q S   SS + +D N  GRN                                   QG N+NS  P S Q S  
Subjt:  NRIERHSSFNSDGSLPSVNLTTQGQSKQHS-HHSSPNHSDTNHRGRN-----------------------------------QGPNSNSNGPVSLQSSSI

Query:  TGQNSSQPSLQALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAGSQ
         G   S     ALTLQHDLNKENQWFPDSG SNHV ++ AN    +EYL DNKV + NGAGSQ
Subjt:  TGQNSSQPSLQALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAGSQ

A0A6J1DLT9 uncharacterized protein LOC1110217572.4e-1033.62Show/hide
Query:  IGGDSKPLTSKETLRKGRRPLRVAMTLRQLAQENRIERHSSFNSDGSLPSVNLTTQGQSKQHSHHSS----PNHSDTNHRGRNQ----------------
        +G +   + S  T R   + L+   +L  L QE R ER +  NSDGSLPSVNLT    SK+++ H S    P+ S+ + RGR                  
Subjt:  IGGDSKPLTSKETLRKGRRPLRVAMTLRQLAQENRIERHSSFNSDGSLPSVNLTTQGQSKQHSHHSS----PNHSDTNHRGRNQ----------------

Query:  ------------------------GPNSNSN--GPVSLQS------------SSITGQ------NSSQPS-LQALTLQHDLNKENQWFPDSGASNHVTNE
                                GPN N N   P    S            SS   Q      NS+ PS +QAL +  D N+++ W+ DSG +NHVTNE
Subjt:  ------------------------GPNSNSN--GPVSLQS------------SSITGQ------NSSQPS-LQALTLQHDLNKENQWFPDSGASNHVTNE

Query:  FANFSFGSEYLRDNKVHVSNGAGSQ-WQNPTPRQT
        F NFS GSEY  D K+ V NG G Q W   + R++
Subjt:  FANFSFGSEYLRDNKVHVSNGAGSQ-WQNPTPRQT

A0A6J1DYD5 uncharacterized protein LOC1110246583.5e-0933.64Show/hide
Query:  IGGDSKPLTSKETLRKGRRPLRVA-MTLRQLAQENRIERHSSFNSDGSLP--SVNLTTQ--GQSKQH---SHHSSPNH------SDTNHRG-----RNQG
        +G + +   S  T++KG  PL +  +T   L+ + RIE+  S   D +LP  S+NL  Q  GQ+ Q+   S++S+ NH      S+ N+RG     RN G
Subjt:  IGGDSKPLTSKETLRKGRRPLRVA-MTLRQLAQENRIERHSSFNSDGSLP--SVNLTTQ--GQSKQH---SHHSSPNH------SDTNHRG-----RNQG

Query:  PNSNSNGPVSLQ---------------SSSITGQN--------SSQPSLQ-----ALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHV
           NS   +  Q               +SS+  QN        SS P  Q     A+ +  D+NK+  W+PDSGA+NHVT++  N S  +E      ++ 
Subjt:  PNSNSNGPVSLQ---------------SSSITGQN--------SSQPSLQ-----ALTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHV

Query:  SNGAG-SQWQNPTPRQT
        +NGAG S W N TPR+T
Subjt:  SNGAG-SQWQNPTPRQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGTGGCGACTCAAAACCTCTCACCTCGAAAGAGACCCTTAGGAAAGGACGTCGGCCGCTCCGCGTCGCGATGACGTTGCGACAGTTGGCTCAAGAAAATCGTAT
TGAACGTCACTCGTCATTTAATTCAGATGGCTCATTACCTTCAGTCAACCTCACCACCCAGGGTCAATCGAAACAACATTCCCACCATTCTTCTCCAAATCACAGTGACA
CAAACCATCGTGGGAGGAACCAAGGTCCGAATTCGAATTCCAATGGTCCAGTTTCTCTACAGTCTTCATCTATTACTGGTCAAAATTCTTCACAACCATCTCTTCAGGCT
CTTACTTTACAGCATGATCTCAATAAGGAGAATCAATGGTTTCCAGATTCTGGTGCTTCTAATCATGTAACCAATGAGTTTGCAAACTTTTCTTTTGGCTCTGAATATCT
TAGAGACAACAAAGTGCATGTAAGCAATGGTGCAGGATCTCAATGGCAAAATCCTACTCCAAGGCAAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGTGGCGACTCAAAACCTCTCACCTCGAAAGAGACCCTTAGGAAAGGACGTCGGCCGCTCCGCGTCGCGATGACGTTGCGACAGTTGGCTCAAGAAAATCGTAT
TGAACGTCACTCGTCATTTAATTCAGATGGCTCATTACCTTCAGTCAACCTCACCACCCAGGGTCAATCGAAACAACATTCCCACCATTCTTCTCCAAATCACAGTGACA
CAAACCATCGTGGGAGGAACCAAGGTCCGAATTCGAATTCCAATGGTCCAGTTTCTCTACAGTCTTCATCTATTACTGGTCAAAATTCTTCACAACCATCTCTTCAGGCT
CTTACTTTACAGCATGATCTCAATAAGGAGAATCAATGGTTTCCAGATTCTGGTGCTTCTAATCATGTAACCAATGAGTTTGCAAACTTTTCTTTTGGCTCTGAATATCT
TAGAGACAACAAAGTGCATGTAAGCAATGGTGCAGGATCTCAATGGCAAAATCCTACTCCAAGGCAAACTTAA
Protein sequenceShow/hide protein sequence
MIGGDSKPLTSKETLRKGRRPLRVAMTLRQLAQENRIERHSSFNSDGSLPSVNLTTQGQSKQHSHHSSPNHSDTNHRGRNQGPNSNSNGPVSLQSSSITGQNSSQPSLQA
LTLQHDLNKENQWFPDSGASNHVTNEFANFSFGSEYLRDNKVHVSNGAGSQWQNPTPRQT