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Lag0042061 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042061
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr13:35755175..35755702
RNA-Seq ExpressionLag0042061
SyntenyLag0042061
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4141194.1 hypothetical protein ERO13_D06G060950v2 [Gossypium hirsutum]1.7e-0545.16Show/hide
Query:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKI
        MPT+H +TIS+ER++L Y+I+    IN+  II +EI  Y +K+    +F SLIT LC R ++
Subjt:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKI

MBA0753580.1 hypothetical protein [Gossypium gossypioides]1.7e-0546.77Show/hide
Query:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKI
        MP +H +TIS+ER+ L Y+IM    INI  II +EI    RK+ +  +F SLIT LC R ++
Subjt:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKI

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.5e-0627.17Show/hide
Query:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKL---------RQYNAQ
        +PTTH  T+S +R++L YS++ G  IN+  +I  EI +   +++  LFF SLITQLC+  +      EE+      ID     ++         +Q +  
Subjt:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKL---------RQYNAQ

Query:  RKDKASASQATPSSGLTPASPPPHTLVSGPTPSFEALAFAFRQLERIDDRLKTYRVYAKERDEAIREFYLSIALSIAPIFPDFP
        R   AS+S+A     L         L       +  ++     L+    + + +  Y+KERD A+++   +      P FP FP
Subjt:  RKDKASASQATPSSGLTPASPPPHTLVSGPTPSFEALAFAFRQLERIDDRLKTYRVYAKERDEAIREFYLSIALSIAPIFPDFP

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]7.0e-0734.91Show/hide
Query:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKLRQYN-AQRKDKASAS
        +PTTH  T+S ERV+L YS++ G  IN+  II  EI +Y  +++  LFF SLIT++C   +      EE+      ID     ++ Q   A+   + S+S
Subjt:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKLRQYN-AQRKDKASAS

Query:  QATPSS
        +   +S
Subjt:  QATPSS

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]3.5e-0628Show/hide
Query:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKLRQYNAQRKDKASASQ
        +PTTH   +S +R++L +S++ G  IN+  +I  EI +   ++   LFF SLIT+LC+    +    EE+      ID     ++ Q      +  + S 
Subjt:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKLRQYNAQRKDKASASQ

Query:  ATPSSGLTPASPPPHTLVSGPTPSFEALAFAFRQLERIDDRLKTYRVYAKERDEAIREFYLSIALSIAPIFPDFP
          PSS   PA+              +AL     Q E    + + +  Y+KERD A+++   +      P FP FP
Subjt:  ATPSSGLTPASPPPHTLVSGPTPSFEALAFAFRQLERIDDRLKTYRVYAKERDEAIREFYLSIALSIAPIFPDFP

TrEMBL top hitse value%identityAlignment
A0A2P5CEY2 Uncharacterized protein7.5e-0727.17Show/hide
Query:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKL---------RQYNAQ
        +PTTH  T+S +R++L YS++ G  IN+  +I  EI +   +++  LFF SLITQLC+  +      EE+      ID     ++         +Q +  
Subjt:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKL---------RQYNAQ

Query:  RKDKASASQATPSSGLTPASPPPHTLVSGPTPSFEALAFAFRQLERIDDRLKTYRVYAKERDEAIREFYLSIALSIAPIFPDFP
        R   AS+S+A     L         L       +  ++     L+    + + +  Y+KERD A+++   +      P FP FP
Subjt:  RKDKASASQATPSSGLTPASPPPHTLVSGPTPSFEALAFAFRQLERIDDRLKTYRVYAKERDEAIREFYLSIALSIAPIFPDFP

A0A2P5CPE8 Uncharacterized protein3.4e-0734.91Show/hide
Query:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKLRQYN-AQRKDKASAS
        +PTTH  T+S ERV+L YS++ G  IN+  II  EI +Y  +++  LFF SLIT++C   +      EE+      ID     ++ Q   A+   + S+S
Subjt:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKLRQYN-AQRKDKASAS

Query:  QATPSS
        +   +S
Subjt:  QATPSS

A0A2P5DXM3 Uncharacterized protein1.7e-0628Show/hide
Query:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKLRQYNAQRKDKASASQ
        +PTTH   +S +R++L +S++ G  IN+  +I  EI +   ++   LFF SLIT+LC+    +    EE+      ID     ++ Q      +  + S 
Subjt:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKLRQYNAQRKDKASASQ

Query:  ATPSSGLTPASPPPHTLVSGPTPSFEALAFAFRQLERIDDRLKTYRVYAKERDEAIREFYLSIALSIAPIFPDFP
          PSS   PA+              +AL     Q E    + + +  Y+KERD A+++   +      P FP FP
Subjt:  ATPSSGLTPASPPPHTLVSGPTPSFEALAFAFRQLERIDDRLKTYRVYAKERDEAIREFYLSIALSIAPIFPDFP

A0A6A2ZSK6 Integrase catalytic domain-containing protein8.3e-0629.38Show/hide
Query:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKLRQYNAQRKDKASASQ
        +PT+H+ T+S +R++L +SI+ G  I++  II E      +++A  L F +LIT LCQ+ K+ +   +E     P I      K+      ++ K    +
Subjt:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKLRQYNAQRKDKASASQ

Query:  ATPSSGLTPASPPPHTLVSGPTPSFEALAFAFRQLERIDDRLKTYRVYAKERD----EAIREFYLSIALSIAPIFPD
        AT S     A+P PH+  +      +A+      + ++ ++L  Y  YAK RD     A+ EF L       P FPD
Subjt:  ATPSSGLTPASPPPHTLVSGPTPSFEALAFAFRQLERIDDRLKTYRVYAKERD----EAIREFYLSIALSIAPIFPD

A0A7J9CYK2 Uncharacterized protein8.3e-0646.77Show/hide
Query:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKI
        MP +H +TIS+ER+ L Y+IM    INI  II +EI    RK+ +  +F SLIT LC R ++
Subjt:  MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCACCACCCACGACAACACGATTTCAGTAGAGAGGGTCATGCTTTTTTACAGTATAATGAAGGGATTGGAAATCAACATAGAGAGCATCATCTGGGAAGAAATTCT
CTCCTATGGGAGAAAGAGAGCTGTGAAGCTGTTCTTCGGGTCACTCATAACCCAATTATGCCAGAGGGTCAAGATCGTTCAAGGAAAAGGTGAGGAACGACATTTTTACA
GACCTACCATTGACTTACCTCTGACAGGGAAGCTGCGACAATACAATGCACAGAGGAAAGATAAAGCTTCCGCCTCCCAAGCTACTCCTTCGTCGGGGTTGACACCTGCT
TCACCACCACCACATACTCTTGTTTCAGGGCCCACTCCATCATTTGAGGCCCTTGCATTCGCTTTCCGCCAGCTAGAACGCATCGATGATCGGTTAAAAACTTATCGGGT
CTACGCAAAGGAGCGAGATGAAGCAATTAGGGAGTTTTATCTCTCTATCGCTCTGAGCATAGCTCCTATTTTTCCTGACTTCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCACCACCCACGACAACACGATTTCAGTAGAGAGGGTCATGCTTTTTTACAGTATAATGAAGGGATTGGAAATCAACATAGAGAGCATCATCTGGGAAGAAATTCT
CTCCTATGGGAGAAAGAGAGCTGTGAAGCTGTTCTTCGGGTCACTCATAACCCAATTATGCCAGAGGGTCAAGATCGTTCAAGGAAAAGGTGAGGAACGACATTTTTACA
GACCTACCATTGACTTACCTCTGACAGGGAAGCTGCGACAATACAATGCACAGAGGAAAGATAAAGCTTCCGCCTCCCAAGCTACTCCTTCGTCGGGGTTGACACCTGCT
TCACCACCACCACATACTCTTGTTTCAGGGCCCACTCCATCATTTGAGGCCCTTGCATTCGCTTTCCGCCAGCTAGAACGCATCGATGATCGGTTAAAAACTTATCGGGT
CTACGCAAAGGAGCGAGATGAAGCAATTAGGGAGTTTTATCTCTCTATCGCTCTGAGCATAGCTCCTATTTTTCCTGACTTCCCTTAA
Protein sequenceShow/hide protein sequence
MPTTHDNTISVERVMLFYSIMKGLEINIESIIWEEILSYGRKRAVKLFFGSLITQLCQRVKIVQGKGEERHFYRPTIDLPLTGKLRQYNAQRKDKASASQATPSSGLTPA
SPPPHTLVSGPTPSFEALAFAFRQLERIDDRLKTYRVYAKERDEAIREFYLSIALSIAPIFPDFP