; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0042080 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042080
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:36075531..36075908
RNA-Seq ExpressionLag0042080
SyntenyLag0042080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABA91072.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]6.5e-1538.98Show/hide
Query:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK
        +P+    N R   V+ L   +GTW+   IR  FL +D   IL+   S    ED + W+ D  G+FSV+SAY+L C+L     + SS       +W L WK
Subjt:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK

Query:  IKLPPKIKICGWKIYNDC
         KLP KIKI  WK+ ++C
Subjt:  IKLPPKIKICGWKIYNDC

ABA97040.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]9.3e-1437.29Show/hide
Query:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK
        +PI T  N R   V+ L   +G+W+   +   FL +DA  IL   TS+ L ED + W+ D  G+FSV+SAY L   L    E+ SS+ +  +  W L WK
Subjt:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK

Query:  IKLPPKIKICGWKIYNDC
          +P K+K+  W+  N+C
Subjt:  IKLPPKIKICGWKIYNDC

EEC81552.1 hypothetical protein OsI_24974 [Oryza sativa Indica Group]9.3e-1437.29Show/hide
Query:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK
        +PI T  N R   V+ L   +G+W+   +   FL +DA  IL   TS+ L ED + W+ D  G+FSV+SAY L   L    E+ SS+ +  +  W L WK
Subjt:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK

Query:  IKLPPKIKICGWKIYNDC
          +P K+K+  W+  N+C
Subjt:  IKLPPKIKICGWKIYNDC

XP_022149515.1 uncharacterized protein LOC111017927 [Momordica charantia]9.6e-1952.13Show/hide
Query:  WNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWKIKLPPKIKICGWKIYND
        WNE LIR+SFLE +A  ILN P S     DE+IW  D K KFSVKS Y LG  L    E  +SN +E    WK  W+  +P K+KIC W+IYND
Subjt:  WNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWKIKLPPKIKICGWKIYND

XP_025877173.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group]7.6e-1639.83Show/hide
Query:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK
        +P+    N R   V+ L   +GTW+   IR  FL +D   IL+   S    ED + W+LD  G+FSV+SAY+L C+L     + SS+      +W L WK
Subjt:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK

Query:  IKLPPKIKICGWKIYNDC
         KLP KIKI  WK+ ++C
Subjt:  IKLPPKIKICGWKIYNDC

TrEMBL top hitse value%identityAlignment
A0A6J1D5Y4 uncharacterized protein LOC1110179274.7e-1952.13Show/hide
Query:  WNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWKIKLPPKIKICGWKIYND
        WNE LIR+SFLE +A  ILN P S     DE+IW  D K KFSVKS Y LG  L    E  +SN +E    WK  W+  +P K+KIC W+IYND
Subjt:  WNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWKIKLPPKIKICGWKIYND

A0A803P9P5 Uncharacterized protein3.5e-1439.66Show/hide
Query:  IFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWKIK
        IF +P++  + V++L T    WN  L++  FLE D   I + P +L    D++IWN +N G +SVKS Y L  +L ++  A SSN       WK FW + 
Subjt:  IFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWKIK

Query:  LPPKIKICGWKIYNDC
        LP KIKI  W+  +DC
Subjt:  LPPKIKICGWKIYNDC

B8B7F1 zf-RVT domain-containing protein4.5e-1437.29Show/hide
Query:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK
        +PI T  N R   V+ L   +G+W+   +   FL +DA  IL   TS+ L ED + W+ D  G+FSV+SAY L   L    E+ SS+ +  +  W L WK
Subjt:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK

Query:  IKLPPKIKICGWKIYNDC
          +P K+K+  W+  N+C
Subjt:  IKLPPKIKICGWKIYNDC

C7J8D0 Os11g0106066 protein3.1e-1538.98Show/hide
Query:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK
        +P+    N R   V+ L   +GTW+   IR  FL +D   IL+   S    ED + W+ D  G+FSV+SAY+L C+L     + SS       +W L WK
Subjt:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK

Query:  IKLPPKIKICGWKIYNDC
         KLP KIKI  WK+ ++C
Subjt:  IKLPPKIKICGWKIYNDC

Q2RBM8 Retrotransposon protein, putative, unclassified3.1e-1538.98Show/hide
Query:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK
        +P+    N R   V+ L   +GTW+   IR  FL +D   IL+   S    ED + W+ D  G+FSV+SAY+L C+L     + SS       +W L WK
Subjt:  KPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWK

Query:  IKLPPKIKICGWKIYNDC
         KLP KIKI  WK+ ++C
Subjt:  IKLPPKIKICGWKIYNDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAACCAATCTTCACACACCCCAATATTAGGCACCTTACAGTGGCTCAGCTCAAAACACCAAATGGGACATGGAACGAACTATTGATTCGATCCTCCTTTTTGGA
GGTTGACGCCATGGCTATTCTCAACACCCCTACTAGTCTGAATTTGGGGGAAGATGAGATCATTTGGAACCTAGATAATAAAGGAAAGTTTTCGGTGAAAAGTGCATATC
ATCTGGGGTGCCAATTGAGACAACGAAGTGAGGCATATTCATCCAATTACAAGGAACATGAGGTTACGTGGAAATTGTTCTGGAAGATTAAACTACCCCCTAAGATCAAG
ATTTGCGGTTGGAAGATTTACAACGACTGTAACGACCCGACTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAACCAATCTTCACACACCCCAATATTAGGCACCTTACAGTGGCTCAGCTCAAAACACCAAATGGGACATGGAACGAACTATTGATTCGATCCTCCTTTTTGGA
GGTTGACGCCATGGCTATTCTCAACACCCCTACTAGTCTGAATTTGGGGGAAGATGAGATCATTTGGAACCTAGATAATAAAGGAAAGTTTTCGGTGAAAAGTGCATATC
ATCTGGGGTGCCAATTGAGACAACGAAGTGAGGCATATTCATCCAATTACAAGGAACATGAGGTTACGTGGAAATTGTTCTGGAAGATTAAACTACCCCCTAAGATCAAG
ATTTGCGGTTGGAAGATTTACAACGACTGTAACGACCCGACTTCTTAA
Protein sequenceShow/hide protein sequence
MAKPIFTHPNIRHLTVAQLKTPNGTWNELLIRSSFLEVDAMAILNTPTSLNLGEDEIIWNLDNKGKFSVKSAYHLGCQLRQRSEAYSSNYKEHEVTWKLFWKIKLPPKIK
ICGWKIYNDCNDPTS