; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0042083 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042083
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA primase large subunit
Genome locationchr13:36228602..36235211
RNA-Seq ExpressionLag0042083
SyntenyLag0042083
Gene Ontology termsGO:0006269 - DNA replication, synthesis of RNA primer (biological process)
GO:0005658 - alpha DNA polymerase:primase complex (cellular component)
GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domainsIPR007238 - DNA primase large subunit, eukaryotic/archaeal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039817.1 putative DNA primase large subunit [Cucumis melo var. makuwa]7.7e-11468.24Show/hide
Query:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR
        MEPY  Q+KSS +T+S+T LPLYRSAPPLEVRLE+FELYAI+RLRVLKGISDGLSRGKKSEEMEKL +E  KTNMKHPQASEV NKDIISHFVLRLVYCR
Subjt:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR

Query:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME
        T    KWFLSME+MLFRHRFLSESPESQK VF+      KAI NAEFEAV+DKLVQVA LIGQP P++DAIYYK                          
Subjt:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME

Query:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ---------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVA
         VPWEEVPELVAGRRVFLHKGYAYIAIYQ                                       IVEAL TSYLGPDYSQPREYADISIKD+DQ+A
Subjt:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ---------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVA

Query:  KSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        KSSFPLCMRH FEKLKEDHHLKHGGRMQLGLFLKG G ++
Subjt:  KSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI

KGN46457.1 hypothetical protein Csa_005048 [Cucumis sativus]4.1e-11569.03Show/hide
Query:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR
        MEPYRS +KS  +T+S+TTLPLYRSAPPLEVRLE+FELYAI+RLRVLKGISDGLSRGKKSEEMEKL RE  KTNMKHPQASEV NKDIISHFVLRLVYCR
Subjt:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR

Query:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME
        T    KWFLSME+MLFRHRFLSE PESQK VF+      KAISNAEFEAV+DKLVQVA LIGQP P++DAIYYK                          
Subjt:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME

Query:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK
         VPWEEVPELVAGRRVFLHKGYAYIAIYQ                                      IVEAL TSYLGPDYSQPREYADISIKD+DQ+AK
Subjt:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK

Query:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        SSFPLCMRH FEKLKEDHHLKHGGRMQLGLFLKG G ++
Subjt:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI

TYK24680.1 putative DNA primase large subunit [Cucumis melo var. makuwa]5.9e-11468.44Show/hide
Query:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR
        MEPY  Q+KSS +T+S+T LPLYRSAPPLEVRLE+FELYAI+RLRVLKGISDGLSRGKKSEEMEKL +E  KTNMKHPQASEV NKDIISHFVLRLVYCR
Subjt:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR

Query:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME
        T    KWFLSME+MLFRHRFLSESPESQK VF+      KAI NAEFEAV+DKLVQVA LIGQP P++DAIYYK                          
Subjt:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME

Query:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK
         VPWEEVPELVAGRRVFLHKGYAYIAIYQ                                      IVEAL TSYLGPDYSQPREYADISIKD+DQ+AK
Subjt:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK

Query:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        SSFPLCMRH FEKLKEDHHLKHGGRMQLGLFLKG G ++
Subjt:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI

XP_004140536.1 probable DNA primase large subunit [Cucumis sativus]4.1e-11569.03Show/hide
Query:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR
        MEPYRS +KS  +T+S+TTLPLYRSAPPLEVRLE+FELYAI+RLRVLKGISDGLSRGKKSEEMEKL RE  KTNMKHPQASEV NKDIISHFVLRLVYCR
Subjt:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR

Query:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME
        T    KWFLSME+MLFRHRFLSE PESQK VF+      KAISNAEFEAV+DKLVQVA LIGQP P++DAIYYK                          
Subjt:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME

Query:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK
         VPWEEVPELVAGRRVFLHKGYAYIAIYQ                                      IVEAL TSYLGPDYSQPREYADISIKD+DQ+AK
Subjt:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK

Query:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        SSFPLCMRH FEKLKEDHHLKHGGRMQLGLFLKG G ++
Subjt:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI

XP_008459852.1 PREDICTED: probable DNA primase large subunit [Cucumis melo]7.0e-11569.03Show/hide
Query:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR
        MEPY  Q+KSS +T+S+T LPLYRSAPPLEVRLE+FELYAI+RLRVLKGISDGLSRGKKSEEMEKL RE  KTNMKHPQASEV NKDIISHFVLRLVYCR
Subjt:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR

Query:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME
        T    KWFLSME+MLFRHRFLSESPESQK VF+      KAISNAEFEAV+DKLVQVA LIGQP P++DAIYYK                          
Subjt:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME

Query:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK
         VPWEEVPELVAGRRVFLHKGYAYIAIYQ                                      IVEAL TSYLGPDYSQPREYADISIKD+DQ+AK
Subjt:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK

Query:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        SSFPLCMRH FEKLKEDHHLKHGGRMQLGLFLKG G ++
Subjt:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI

TrEMBL top hitse value%identityAlignment
A0A0A0KDK9 DNA primase large subunit2.0e-11569.03Show/hide
Query:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR
        MEPYRS +KS  +T+S+TTLPLYRSAPPLEVRLE+FELYAI+RLRVLKGISDGLSRGKKSEEMEKL RE  KTNMKHPQASEV NKDIISHFVLRLVYCR
Subjt:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR

Query:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME
        T    KWFLSME+MLFRHRFLSE PESQK VF+      KAISNAEFEAV+DKLVQVA LIGQP P++DAIYYK                          
Subjt:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME

Query:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK
         VPWEEVPELVAGRRVFLHKGYAYIAIYQ                                      IVEAL TSYLGPDYSQPREYADISIKD+DQ+AK
Subjt:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK

Query:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        SSFPLCMRH FEKLKEDHHLKHGGRMQLGLFLKG G ++
Subjt:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI

A0A1S3CBL6 probable DNA primase large subunit3.4e-11569.03Show/hide
Query:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR
        MEPY  Q+KSS +T+S+T LPLYRSAPPLEVRLE+FELYAI+RLRVLKGISDGLSRGKKSEEMEKL RE  KTNMKHPQASEV NKDIISHFVLRLVYCR
Subjt:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR

Query:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME
        T    KWFLSME+MLFRHRFLSESPESQK VF+      KAISNAEFEAV+DKLVQVA LIGQP P++DAIYYK                          
Subjt:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME

Query:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK
         VPWEEVPELVAGRRVFLHKGYAYIAIYQ                                      IVEAL TSYLGPDYSQPREYADISIKD+DQ+AK
Subjt:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK

Query:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        SSFPLCMRH FEKLKEDHHLKHGGRMQLGLFLKG G ++
Subjt:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI

A0A5A7TE64 DNA primase large subunit3.7e-11468.24Show/hide
Query:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR
        MEPY  Q+KSS +T+S+T LPLYRSAPPLEVRLE+FELYAI+RLRVLKGISDGLSRGKKSEEMEKL +E  KTNMKHPQASEV NKDIISHFVLRLVYCR
Subjt:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR

Query:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME
        T    KWFLSME+MLFRHRFLSESPESQK VF+      KAI NAEFEAV+DKLVQVA LIGQP P++DAIYYK                          
Subjt:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME

Query:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ---------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVA
         VPWEEVPELVAGRRVFLHKGYAYIAIYQ                                       IVEAL TSYLGPDYSQPREYADISIKD+DQ+A
Subjt:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ---------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVA

Query:  KSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        KSSFPLCMRH FEKLKEDHHLKHGGRMQLGLFLKG G ++
Subjt:  KSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI

A0A5D3DN30 DNA primase large subunit2.9e-11468.44Show/hide
Query:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR
        MEPY  Q+KSS +T+S+T LPLYRSAPPLEVRLE+FELYAI+RLRVLKGISDGLSRGKKSEEMEKL +E  KTNMKHPQASEV NKDIISHFVLRLVYCR
Subjt:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR

Query:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME
        T    KWFLSME+MLFRHRFLSESPESQK VF+      KAI NAEFEAV+DKLVQVA LIGQP P++DAIYYK                          
Subjt:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME

Query:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK
         VPWEEVPELVAGRRVFLHKGYAYIAIYQ                                      IVEAL TSYLGPDYSQPREYADISIKD+DQ+AK
Subjt:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK

Query:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        SSFPLCMRH FEKLKEDHHLKHGGRMQLGLFLKG G ++
Subjt:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI

A0A6J1KPU0 probable DNA primase large subunit6.0e-11268.44Show/hide
Query:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR
        ME +RSQ+KSST T+SSTTLPLYRSAPPLEVRLEEFELYAI+RLRVLKGISDGLSRGKKSEEMEKL R     +MKHPQASE  NKDIISHFVLRLVYCR
Subjt:  MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCR

Query:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME
        T    KWFLSME+MLFRHRFLSESPESQK VFS      KAIS AEFEAVKDKLVQVA LIGQPVP+ADAIYYK                          
Subjt:  T----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMME

Query:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK
         VPWEEVPELVAGRRV LHKGYAYIAIYQ                                      IVEAL TSYLGPDYSQP EYADISIKD++Q+AK
Subjt:  EVPWEEVPELVAGRRVFLHKGYAYIAIYQ--------------------------------------IVEALSTSYLGPDYSQPREYADISIKDIDQVAK

Query:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        SSFPLCMRH F+KLKEDHHLKHGGRMQLGLFLKG G ++
Subjt:  SSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI

SwissProt top hitse value%identityAlignment
O89044 DNA primase large subunit1.2e-2732.06Show/hide
Query:  TLPLYRSAPPLEVRLEEFELYAIERLRVLKGISD-GLSRGKKSEEME-KLAREFWKTNMKHPQ----ASEVANKDIISHFVLRLVYCRT----KWFLSME
        +L  Y   P   + L EFE  A +R+++LK I + G+S  K +E+ + KL  E  K    + +      E   +D ISHF+LRL YC++    +WF+  E
Subjt:  TLPLYRSAPPLEVRLEEFELYAIERLRVLKGISD-GLSRGKKSEEME-KLAREFWKTNMKHPQ----ASEVANKDIISHFVLRLVYCRT----KWFLSME

Query:  SMLFRHRFLSESPESQKLVFSKAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMMEEVPWEEVPELVAGRRVFL
          L R RF S  P+ +   F K  ++  FEA+ D   +   L  Q +  +              S  GV     R E   + +VP+ +  +L  GR+V+L
Subjt:  SMLFRHRFLSESPESQKLVFSKAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMMEEVPWEEVPELVAGRRVFL

Query:  HKGYAYIAIYQIV-----------------------------------EALSTSYLGPDYSQPREYADISIKDIDQVAKSSFPLCMRHPFEKLKEDHHLK
          G+AY+ +  IV                                     LS SY G DYS  +    IS+  ID ++  SFP CMR   + L+E+HHL+
Subjt:  HKGYAYIAIYQIV-----------------------------------EALSTSYLGPDYSQPREYADISIKDIDQVAKSSFPLCMRHPFEKLKEDHHLK

Query:  HGGRMQLGLFLKGPG
        HGGRMQ GLFLKG G
Subjt:  HGGRMQLGLFLKGPG

P33610 DNA primase large subunit2.0e-2731.75Show/hide
Query:  TLPLYRSAPPLEVRLEEFELYAIERLRVLKGISD-GLSRGKKSEEME-KLAREFWKTNMKHPQ----ASEVANKDIISHFVLRLVYCRT----KWFLSME
        +L  Y   P   + L EFE  A +R+++LK I + G+S  K +E+ + KL  E  K    + +      E   +D ISHF+LRL YC++    +WF+  E
Subjt:  TLPLYRSAPPLEVRLEEFELYAIERLRVLKGISD-GLSRGKKSEEME-KLAREFWKTNMKHPQ----ASEVANKDIISHFVLRLVYCRT----KWFLSME

Query:  SMLFRHRFLSESPESQKLVFSKAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMMEEVPWEEVPELVAGRRVFL
          L R RF S  P+ +   F K  S+  FEA+ D   +   L  Q +  +              S  G+     + E   + +VP+ +  +L  GR+V+L
Subjt:  SMLFRHRFLSESPESQKLVFSKAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMMEEVPWEEVPELVAGRRVFL

Query:  HKGYAYIAIYQIV-----------------------------------EALSTSYLGPDYSQPREYADISIKDIDQVAKSSFPLCMRHPFEKLKEDHHLK
          G+AY+ +  IV                                     LS SY G DYS  +    IS+  ID ++  SFP CMR   + L+E+HHL+
Subjt:  HKGYAYIAIYQIV-----------------------------------EALSTSYLGPDYSQPREYADISIKDIDQVAKSSFPLCMRHPFEKLKEDHHLK

Query:  HGGRMQLGLFLKGPG
        HGGRMQ GLFLKG G
Subjt:  HGGRMQLGLFLKGPG

P49643 DNA primase large subunit2.8e-2631.21Show/hide
Query:  LPLYRSAPPLEVRLEEFELYAIERLRVLKGISD-GLSRGKKSEEME-KLAREFWKTNMKHPQ----ASEVANKDIISHFVLRLVYCRT----KWFLSMES
        L  Y   P   + L EFE  AI+R+++LK + + G+S  K +E+ + KL  E  K    + +      E   +D ISHF+LRL YC++    +WF+  E 
Subjt:  LPLYRSAPPLEVRLEEFELYAIERLRVLKGISD-GLSRGKKSEEME-KLAREFWKTNMKHPQ----ASEVANKDIISHFVLRLVYCRT----KWFLSMES

Query:  MLFRHRFLSESPESQKLVFSKAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMMEEVPWEEVPELVAGRRVFLH
         L R RF S  P+ +   F K  S  +FEA+ D+                     + +  +V SS  +   +   E   + ++P+ +  +L  GR+V+L 
Subjt:  MLFRHRFLSESPESQKLVFSKAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMMEEVPWEEVPELVAGRRVFLH

Query:  KGYAYIAIYQIV-----------------------------------EALSTSYLGPDYSQPREYADISIKDIDQVAKSSFPLCMRHPFEKLKEDHHLKH
         G+AY+ +  IV                                     LS SY G DYS       IS+  ID ++  SFP CMR   + L+E+HHL+H
Subjt:  KGYAYIAIYQIV-----------------------------------EALSTSYLGPDYSQPREYADISIKDIDQVAKSSFPLCMRHPFEKLKEDHHLKH

Query:  GGRMQLGLFLKGPG
        GGRMQ GLFLKG G
Subjt:  GGRMQLGLFLKGPG

Q84WJ2 Probable DNA primase large subunit3.5e-7750.29Show/hide
Query:  MEPYRSQKKS-STTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYC
        ME  RSQK++ S    S+ TLPLY +AP +EVRLEEFEL+AI+RLRVLKG+SDGL+R +   EM+ L    WK +M+    SE+ NKDIISHFVLRLVYC
Subjt:  MEPYRSQKKS-STTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYC

Query:  RT----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMM
        R+    KWFLSME+ LFRHRF  +  E Q+ +        KA+  AE E++K++L  VA   GQ     + IYYK                         
Subjt:  RT----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMM

Query:  EEVPWEEVPELVAGRRVFLHKGYAYIA--------------------------------------IYQIVEALSTSYLGPDYSQPREYADISIKDIDQVA
          VP+EEVP+LVA RRV L KG+A++A                                      +  IVEALSTSYLGPDYSQ  EYADIS+KDIDQV+
Subjt:  EEVPWEEVPELVAGRRVFLHKGYAYIA--------------------------------------IYQIVEALSTSYLGPDYSQPREYADISIKDIDQVA

Query:  KSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        KSSFPLCMRH FEKL+EDHHLKHGGRMQLGLFLKG G ++
Subjt:  KSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI

Q9VPH2 DNA primase large subunit3.0e-2829.91Show/hide
Query:  SSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKK--SEEMEK-----LAREFWKT---------NMKHPQASEVANKDIISHFV
        +S  T     + LY   P  +V ++EFE  A+ERLR+L+ +    +R  +  S+E ++     L RE  ++         + KH    +   +D +SHF+
Subjt:  SSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKK--SEEMEK-----LAREFWKT---------NMKHPQASEVANKDIISHFV

Query:  LRLVYCRT----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAI-YYKVSKVILVVSSFGVCRARH
        LRL YCR+    +WF++ E  LFR++F + S    K            ++ A+ + VKD L +    +GQ V   + + +YK                  
Subjt:  LRLVYCRT----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAI-YYKVSKVILVVSSFGVCRARH

Query:  RDERSMMEEVPWEEVPELVAGRRVFLHKGYAYIAIYQIV-----------------------------------EALSTSYLGPDYSQPREYADISIKDI
                 VP+ +V +LV GRR FL  GYAY+  + +V                                   +AL  SY G DY+  R+ A + I+ +
Subjt:  RDERSMMEEVPWEEVPELVAGRRVFLHKGYAYIAIYQIV-----------------------------------EALSTSYLGPDYSQPREYADISIKDI

Query:  DQVAKSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPG
        DQ++K+S PLCMR   E ++ +HH+KH GRMQ GLFLKG G
Subjt:  DQVAKSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPG

Arabidopsis top hitse value%identityAlignment
AT1G24267.1 Protein of unknown function (DUF1664)1.8e-0459.46Show/hide
Query:  GWKLPVPDMMFATKRSLLSDACSSVARQLENVYSSIA
        GWKL  PD+MFAT+RS LSDAC+SV  Q++  Y+S++
Subjt:  GWKLPVPDMMFATKRSLLSDACSSVARQLENVYSSIA

AT1G24267.2 Protein of unknown function (DUF1664)1.8e-0459.46Show/hide
Query:  GWKLPVPDMMFATKRSLLSDACSSVARQLENVYSSIA
        GWKL  PD+MFAT+RS LSDAC+SV  Q++  Y+S++
Subjt:  GWKLPVPDMMFATKRSLLSDACSSVARQLENVYSSIA

AT1G67320.1 DNA primase, large subunit family6.2e-7750.6Show/hide
Query:  MEPYRSQKKS-STTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYC
        ME  RSQK++ S    S+ TLPLY +AP +EVRLEEFEL+AI+RLRVLKG+SDGL+R +   EM+ L    WK +M+    SE+ NKDIISHFVLRLVYC
Subjt:  MEPYRSQKKS-STTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYC

Query:  RT----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMM
        R+    KWFLSME+ LFRHRF  +  E Q+ +        KA+  AE E++K++L  VA   GQ     + IYYK                         
Subjt:  RT----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMM

Query:  EEVPWEEVPELVAGRRVFLHKGYAYIA--------------------------------------IYQIVEALSTSYLGPDYSQPREYADISIKDIDQVA
          VP+EEVP+LVA RRV L KG+A++A                                      +  IVEALSTSYLGPDYSQ  EYADIS+KDIDQV+
Subjt:  EEVPWEEVPELVAGRRVFLHKGYAYIA--------------------------------------IYQIVEALSTSYLGPDYSQPREYADISIKDIDQVA

Query:  KSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLK
        KSSFPLCMRH FEKL+EDHHLKHGGRMQLGLFLK
Subjt:  KSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLK

AT1G67320.2 DNA primase, large subunit family2.5e-7850.29Show/hide
Query:  MEPYRSQKKS-STTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYC
        ME  RSQK++ S    S+ TLPLY +AP +EVRLEEFEL+AI+RLRVLKG+SDGL+R +   EM+ L    WK +M+    SE+ NKDIISHFVLRLVYC
Subjt:  MEPYRSQKKS-STTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYC

Query:  RT----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMM
        R+    KWFLSME+ LFRHRF  +  E Q+ +        KA+  AE E++K++L  VA   GQ     + IYYK                         
Subjt:  RT----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMM

Query:  EEVPWEEVPELVAGRRVFLHKGYAYIA--------------------------------------IYQIVEALSTSYLGPDYSQPREYADISIKDIDQVA
          VP+EEVP+LVA RRV L KG+A++A                                      +  IVEALSTSYLGPDYSQ  EYADIS+KDIDQV+
Subjt:  EEVPWEEVPELVAGRRVFLHKGYAYIA--------------------------------------IYQIVEALSTSYLGPDYSQPREYADISIKDIDQVA

Query:  KSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        KSSFPLCMRH FEKL+EDHHLKHGGRMQLGLFLKG G ++
Subjt:  KSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI

AT1G67320.3 DNA primase, large subunit family1.1e-7648.74Show/hide
Query:  MEPYRSQKKS-STTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYC
        ME  RSQK++ S    S+ TLPLY +AP +EVRLEEFEL+AI+RLRVLKG+SDGL+R +   EM+ L    WK +M+    SE+ NKDIISHFVLRLVYC
Subjt:  MEPYRSQKKS-STTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYC

Query:  RT----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQ-------------PVPTADAIYYK----VSKVILVV
        R+    KWFLSME+ LFRHRF  +  E Q+ +        KA+  AE E++K++L  VA   GQ             P+ T   +  K    + +  L  
Subjt:  RT----KWFLSMESMLFRHRFLSESPESQKLVFS------KAISNAEFEAVKDKLVQVAWLIGQ-------------PVPTADAIYYK----VSKVILVV

Query:  SSFGVCRARHRDERSMMEEVPWEEVPELVAGRRVFLHKGYAYIA--------------------------------------IYQIVEALSTSYLGPDYS
         SF V         ++  +VP+EEVP+LVA RRV L KG+A++A                                      +  IVEALSTSYLGPDYS
Subjt:  SSFGVCRARHRDERSMMEEVPWEEVPELVAGRRVFLHKGYAYIA--------------------------------------IYQIVEALSTSYLGPDYS

Query:  QPREYADISIKDIDQVAKSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI
        Q  EYADIS+KDIDQV+KSSFPLCMRH FEKL+EDHHLKHGGRMQLGLFLKG G ++
Subjt:  QPREYADISIKDIDQVAKSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCCTATCGTTCTCAGAAGAAATCTTCCACCACAACCAGTTCCTCTACCACTCTTCCCCTCTACCGCTCTGCTCCTCCTCTCGAAGTCAGGCTTGAAGAATTTGA
GCTTTATGCCATAGAACGTCTTCGAGTCCTTAAAGGGATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGCGAGAGAATTCTGGAAAACCA
ATATGAAACATCCACAGGCATCCGAGGTTGCGAACAAGGATATAATATCTCACTTTGTTCTGCGCCTTGTATACTGCAGAACAAAATGGTTCCTTTCTATGGAATCTATG
CTATTCCGACACCGTTTTCTTTCTGAAAGTCCTGAATCTCAGAAGTTGGTCTTTTCCAAAGCAATCAGTAATGCAGAATTTGAGGCTGTAAAGGACAAATTGGTTCAAGT
TGCTTGGTTGATTGGTCAGCCTGTACCAACTGCTGATGCAATATACTACAAGGTCTCTAAAGTTATTCTGGTTGTGAGCTCATTCGGGGTTTGTAGAGCTCGTCATAGAG
ATGAGAGGTCTATGATGGAGGAGGTACCATGGGAAGAAGTTCCAGAACTTGTGGCTGGTCGAAGGGTATTTCTCCATAAAGGATATGCGTACATTGCTATTTATCAGATC
GTAGAAGCCCTTTCCACAAGCTACTTGGGTCCTGACTACTCACAGCCAAGAGAGTATGCTGATATATCAATAAAGGACATTGACCAAGTAGCTAAAAGTTCATTTCCTCT
TTGCATGCGGCACCCTTTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGAATGCAATTAGGTCTCTTTCTCAAGGGGCCTGGGCAGGAAATATGGCATC
ATCATTCTTGTAGTTTTAGTAGGATATGGGTTGGTTTGGATGAAGGTAACTGTGTGGGATGGAAACTTCCTGTTCCTGATATGATGTTTGCTACAAAGCGTAGTCTATTA
TCTGATGCTTGCAGTTCCGTTGCTAGACAGCTTGAGAATGTTTACTCATCCATCGCGGTAATATCTTCTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCCTATCGTTCTCAGAAGAAATCTTCCACCACAACCAGTTCCTCTACCACTCTTCCCCTCTACCGCTCTGCTCCTCCTCTCGAAGTCAGGCTTGAAGAATTTGA
GCTTTATGCCATAGAACGTCTTCGAGTCCTTAAAGGGATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGCGAGAGAATTCTGGAAAACCA
ATATGAAACATCCACAGGCATCCGAGGTTGCGAACAAGGATATAATATCTCACTTTGTTCTGCGCCTTGTATACTGCAGAACAAAATGGTTCCTTTCTATGGAATCTATG
CTATTCCGACACCGTTTTCTTTCTGAAAGTCCTGAATCTCAGAAGTTGGTCTTTTCCAAAGCAATCAGTAATGCAGAATTTGAGGCTGTAAAGGACAAATTGGTTCAAGT
TGCTTGGTTGATTGGTCAGCCTGTACCAACTGCTGATGCAATATACTACAAGGTCTCTAAAGTTATTCTGGTTGTGAGCTCATTCGGGGTTTGTAGAGCTCGTCATAGAG
ATGAGAGGTCTATGATGGAGGAGGTACCATGGGAAGAAGTTCCAGAACTTGTGGCTGGTCGAAGGGTATTTCTCCATAAAGGATATGCGTACATTGCTATTTATCAGATC
GTAGAAGCCCTTTCCACAAGCTACTTGGGTCCTGACTACTCACAGCCAAGAGAGTATGCTGATATATCAATAAAGGACATTGACCAAGTAGCTAAAAGTTCATTTCCTCT
TTGCATGCGGCACCCTTTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGAATGCAATTAGGTCTCTTTCTCAAGGGGCCTGGGCAGGAAATATGGCATC
ATCATTCTTGTAGTTTTAGTAGGATATGGGTTGGTTTGGATGAAGGTAACTGTGTGGGATGGAAACTTCCTGTTCCTGATATGATGTTTGCTACAAAGCGTAGTCTATTA
TCTGATGCTTGCAGTTCCGTTGCTAGACAGCTTGAGAATGTTTACTCATCCATCGCGGTAATATCTTCTGTCTGA
Protein sequenceShow/hide protein sequence
MEPYRSQKKSSTTTSSSTTLPLYRSAPPLEVRLEEFELYAIERLRVLKGISDGLSRGKKSEEMEKLAREFWKTNMKHPQASEVANKDIISHFVLRLVYCRTKWFLSMESM
LFRHRFLSESPESQKLVFSKAISNAEFEAVKDKLVQVAWLIGQPVPTADAIYYKVSKVILVVSSFGVCRARHRDERSMMEEVPWEEVPELVAGRRVFLHKGYAYIAIYQI
VEALSTSYLGPDYSQPREYADISIKDIDQVAKSSFPLCMRHPFEKLKEDHHLKHGGRMQLGLFLKGPGQEIWHHHSCSFSRIWVGLDEGNCVGWKLPVPDMMFATKRSLL
SDACSSVARQLENVYSSIAVISSV