; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0042084 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042084
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr13:36237003..36238214
RNA-Seq ExpressionLag0042084
SyntenyLag0042084
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.3e-9851.59Show/hide
Query:  KVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSY
        ++T E+N++LL+ Y++EE+  AIR   PTKA GP+GFPA+F+Q YW +VG  T+ +CLN LN+   +K+WN T I LIPK +Q R +SD+RPISLCNVSY
Subjt:  KVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSY

Query:  KIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPT
        KI++K + NRLK V+  +I ++QSAF+  R+I+DN+I+GHECL+ +   + G +G AALKLD+SKA+DRVEW+YL  IM K+GF+  WI  +++C+++  
Subjt:  KIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPT

Query:  FSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALL-VSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSV
        FSI LNG   G  +PSRGIRQGDPLSPYLFLLC +GLSAL+   + S  L GI    +   I+HL FA+D LIF+++   E    R +L  Y +ASGQ +
Subjt:  FSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALL-VSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSV

Query:  NLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSR
        N SKS ++FS NV  + QQYL   L++++    G+YLG+PS F+R
Subjt:  NLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSR

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]2.3e-9849.47Show/hide
Query:  SLHPLQIKEIWMVFLVMFNGKVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPK
        S HP QI+E+     + F  KVT+EMN+ L+  +++EEV  A++   P KAPGP+G  A+FFQKYW IVG       LN+LN    + E N TNI LIPK
Subjt:  SLHPLQIKEIWMVFLVMFNGKVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPK

Query:  SRQARLVSDYRPISLCNVSYKIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMG
        +   + ++D+RPISLCNV YK+++K+LANRLK +L  II E+QSAF S R ITDN+++  E +++L  K  GK G+ A+KLDMSKA+DRVEW ++ K+M 
Subjt:  SRQARLVSDYRPISLCNVSYKIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMG

Query:  KLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALL-VSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAK
        ++GF + W  LVM+C+TS ++SIL+NG + G I PSRG+RQGDPLSP LFLLC +GLSAL+  + R+K + GISI R CPK++HLFFA+D ++F KAA +
Subjt:  KLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALL-VSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAK

Query:  EFGHFRNILKEYEKASGQSVNLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV
        E    R+IL +YE+ASGQ +N  KS + FS N   +T+  + N L          YLG+PS   R K++ F  + + V
Subjt:  EFGHFRNILKEYEKASGQSVNLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]6.1e-9950.98Show/hide
Query:  VTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSYK
        VT+EMN  L+  ++REE+  A+    PTKAPGP+G  AIFFQKYW+IVG   +   L++LNS  S+ E N TNI L+PK +    +SD+RPISLCNV YK
Subjt:  VTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSYK

Query:  IVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTF
        +++KVLANRLK +L +II E+QSAF+SGR ITDN+++  E +++L  K++GK G+AA+KLDMSKAYDRVEW ++ ++M K+GFH  WI LVM C+TS ++
Subjt:  IVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTF

Query:  SILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVS-DRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVN
        SIL+NG ++G I P+RG+RQGDP+SPY+FLLC  G S+LL    R   ++G+SI R CPKI+HLFFA+D L+F KA ++E     +IL+ YE ASGQ +N
Subjt:  SILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVS-DRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVN

Query:  LSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV
        + KS V FS N P + +  +   L          YLG+PS   + K   F  + + V
Subjt:  LSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV

XP_030941688.1 uncharacterized protein LOC115966628 [Quercus lobata]1.0e-9852.23Show/hide
Query:  KVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSY
        KVTD+M Q L + ++  E+  A+    PTKAPGP+G  A+F+QK+W IVG+  IS+ L+  NS     E NHTNIVLIPK      +SD+RPISLCNV Y
Subjt:  KVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSY

Query:  KIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPT
        KI++KVLANRLK VL  II  +QSAF+ G  ITDN+++  + L+ +  +RKGK G  ALKLD+SKAYDRVEW++L  IM KLGF   WI+ VM CV++PT
Subjt:  KIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPT

Query:  FSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLV-SDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSV
        FS+L+NG+ FG I PSRG+RQGDPLSPYLFLLC +G S+LL  ++    L G+SI +  P+ISHL FA+D L+F +A  KE      IL+ Y  ASGQ +
Subjt:  FSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLV-SDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSV

Query:  NLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV
        NL KS ++FS N P   +++   TL ++  E   SYLG+P+   R K + F FI D V
Subjt:  NLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV

XP_030968750.1 uncharacterized protein LOC115989220 [Quercus lobata]2.2e-9648.46Show/hide
Query:  FKKLLTTTSRKLSLHPLQIKEIWMVFLVMFNGKVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVK
        F+ + TTT      HP +++E+      +   KVT EMN  L   ++ EEV  A+    PTKAPGP+G  A+F+QKYW IVG    +   N LN +A + 
Subjt:  FKKLLTTTSRKLSLHPLQIKEIWMVFLVMFNGKVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVK

Query:  EWNHTNIVLIPKSRQARLVSDYRPISLCNVSYKIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYD
        + N+TNI L+PK +    + D+RPISL NV YK+++KVLANRL+ +L +II E+QSAFIS R ITDN+++  E +++L  K+ GK  + A+KLDMSKAYD
Subjt:  EWNHTNIVLIPKSRQARLVSDYRPISLCNVSYKIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYD

Query:  RVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLV-SDRSKSLAGISIARSCPKISHLFFA
        RVEW ++ K+M KLGFH  WI  V+KC+T+ T+S+L+NGE+ G I PSRG+RQGDPLSPYLFLLC K  SAL+V ++ S+SL G+SI R CP+I+HLFFA
Subjt:  RVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLV-SDRSKSLAGISIARSCPKISHLFFA

Query:  EDRLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV
        +D L+F +A  +E      ILK YE ASGQ VN  KS V FS N   + +  +   L        G YLG+PS   + K + F  I + V
Subjt:  EDRLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV

TrEMBL top hitse value%identityAlignment
A0A2N9EPY2 Reverse transcriptase domain-containing protein1.5e-9850.98Show/hide
Query:  VTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSYK
        VT EMN+ L+  ++ EEV AA++   P KAPGP+G P +F+QKYW ++GE    + LN LNS   +K  NHT I LIPK +    V ++RPI+LCNV YK
Subjt:  VTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSYK

Query:  IVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTF
        I++KVLANRLK +L +I+ E+Q+AF+ GR ITDN+++  E L+ ++ ++KGKVG  ALKLDMSKAYDRVEWSYL ++M ++GFHS W++L+M+C+T+ ++
Subjt:  IVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTF

Query:  SILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALL-VSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVN
        SIL+NGE  GFIKP RG+RQGDPLSPYLFL C KGL +L+  +  +  L G++I+R  PKI+HLFFA+D L+F KA   +    ++ILKEYE+ASGQ  N
Subjt:  SILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALL-VSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVN

Query:  LSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV
          K+ + FSK+ P   Q  +   L +   +    YLG+PS   R K   F  I D V
Subjt:  LSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV

A0A2N9FJ03 Reverse transcriptase domain-containing protein1.1e-9850.55Show/hide
Query:  VTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSYK
        VT+ MN  L+  +  +EV  AI+   P+KAPGP+G P IF+QKYW ++G   IS+ L+ LNS   +K  NHT I LIPK +    V+D+RPISLCNV YK
Subjt:  VTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSYK

Query:  IVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTF
        +V+KVLANRLKL+L ++I ESQSAF+ GR ITDN+++  E L+ ++  + G+ G  ALKLDMSKAYDRVEW YL ++M K+GFH  WI L+ +C+++ ++
Subjt:  IVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTF

Query:  SILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALL-VSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVN
        SIL+NGE  G I PSRG+RQGDPLSPYLFLLC +G+ +L+  ++ S  + G+S+ R  PKI+HLFFA+D L+F KA        + IL++YE+ASGQ VN
Subjt:  SILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALL-VSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVN

Query:  LSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV-RLTH
          K+ + FSK VP  TQ  + +TL + +      YLG+PS   RG+   F  I + V RL H
Subjt:  LSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV-RLTH

A0A2N9GI95 Reverse transcriptase domain-containing protein5.1e-9950.14Show/hide
Query:  VTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSYK
        VT+EMN  L   +S  EV+AA++   P KAPGP+G P +FFQKYW  +G+    + L  LNS   +K  NHT I LIPK +    V D+RPISLCNV YK
Subjt:  VTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSYK

Query:  IVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTF
        I++KVLANRLK++L +I+ ESQSAF+ GR ITDN+++  E L+ +  ++KG++G  ALKLDMSKAYDRVEW YL ++M ++GF S W++++M+C+++ ++
Subjt:  IVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTF

Query:  SILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDR-SKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVN
        SIL+NGE  GFIKPSRG+RQGDPLSPYLFLLC +G  +LL  ++ + +L G+SI+R  PKI+HLFFA+D L+F KA   +    + IL +YE+ASGQ +N
Subjt:  SILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDR-SKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVN

Query:  LSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV
          K+ + FSK+ P   Q  + N L +   +    YLG+PS   R K   F  I + V
Subjt:  LSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV

A0A2N9J7Z2 Reverse transcriptase domain-containing protein3.3e-9850.7Show/hide
Query:  VTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSYK
        VT+ MN  L+  +  +EV  AI+   P+KAPGP+G P IF+QKYW ++G   IS+ L+ LNS   +K  NHT I LIPK +    V+D+RPISLCNV YK
Subjt:  VTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSYK

Query:  IVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTF
        +V+KVLANRLKL+L ++I ESQSAF+ GR ITDN+++  E L+ ++  + G+ G  ALKLDMSKAYDRVEW YL ++M K+GFH  WI L+ +C+++ ++
Subjt:  IVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTF

Query:  SILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALL-VSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVN
        SIL+NGE  G I PSRG+RQGDPLSPYLFLLC +GL +L+  ++ S  + G+S+ R  PKI+HLFFA+D L+F KA        + IL++YE+ASGQ VN
Subjt:  SILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALL-VSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVN

Query:  LSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV
          K+ + FSK VP  TQ  + +TL + +      YLG+PS   RG+   F  I + V
Subjt:  LSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNV

A0A6J1DX30 uncharacterized protein LOC1110248741.1e-9851.59Show/hide
Query:  KVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSY
        ++T E+N++LL+ Y++EE+  AIR   PTKA GP+GFPA+F+Q YW +VG  T+ +CLN LN+   +K+WN T I LIPK +Q R +SD+RPISLCNVSY
Subjt:  KVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSY

Query:  KIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPT
        KI++K + NRLK V+  +I ++QSAF+  R+I+DN+I+GHECL+ +   + G +G AALKLD+SKA+DRVEW+YL  IM K+GF+  WI  +++C+++  
Subjt:  KIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPT

Query:  FSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALL-VSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSV
        FSI LNG   G  +PSRGIRQGDPLSPYLFLLC +GLSAL+   + S  L GI    +   I+HL FA+D LIF+++   E    R +L  Y +ASGQ +
Subjt:  FSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALL-VSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSV

Query:  NLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSR
        N SKS ++FS NV  + QQYL   L++++    G+YLG+PS F+R
Subjt:  NLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSR

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein3.6e-3327.55Show/hide
Query:  EVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPK-SRQARLVSDYRPISLCNVSYKIVTKVLANRLKLVLN
        E++A I S P  K+PGP+GF A F+Q+Y + +    +    +I         +   +I+LIPK  R      ++RPISL N+  KI+ K+LANR++  + 
Subjt:  EVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPK-SRQARLVSDYRPISLCNVSYKIVTKVLANRLKLVLN

Query:  EIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGK-VGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKP
        ++I   Q  FI G     N+    + +N +    + K   +  + +D  KA+D+++  ++ K + KLG    ++ ++      PT +I+LNG+       
Subjt:  EIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGK-VGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKP

Query:  SRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSKSMVIFSKNVPYD
          G RQG PLSP LF +  + L+  +   + K + GI + +   K+S   FA+D +++++       +   ++  + K SG  +N+ KS      N    
Subjt:  SRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSKSMVIFSKNVPYD

Query:  TQQYLGNTLSMRVTESLGSYLGM
          Q +G  L   +      YLG+
Subjt:  TQQYLGNTLSMRVTESLGSYLGM

P08548 LINE-1 reverse transcriptase homolog3.9e-3226.95Show/hide
Query:  KKLLTTTSRKLSLHPLQ-IKEIWMVFLVMFNGKVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVK
        +K+L    +KL  H  + +KEI          +++ +  + L    S  E+ + I++ P  K+PGP+GF + F+Q + + +    ++   NI        
Subjt:  KKLLTTTSRKLSLHPLQ-IKEIWMVFLVMFNGKVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVK

Query:  EWNHTNIVLIPK-SRQARLVSDYRPISLCNVSYKIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAY
         +   NI LIPK  +      +YRPISL N+  KI+ K+L NR++  + +II   Q  FI G     N+      +  +  K K K  +  L +D  KA+
Subjt:  EWNHTNIVLIPK-SRQARLVSDYRPISLCNVSYKIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAY

Query:  DRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKSLAGISIARSCPKISHLFFA
        D ++  ++ + + K+G   T++ L+    + PT +I+LNG          G RQG PLSP LF +  + L+  +  +  K++ GI I     K+S   FA
Subjt:  DRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKSLAGISIARSCPKISHLFFA

Query:  EDRLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGM
        +D +++++           ++KEY   SG  +N  KS+     N     ++ + +++   V      YLG+
Subjt:  EDRLIFIKAAAKEFGHFRNILKEYEKASGQSVNLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGM

P11369 LINE-1 retrotransposable element ORF2 protein2.0e-3128.07Show/hide
Query:  KVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKY-WDIVGETTISSCLNILNSEASV-KEWNHTNIVLIPK-SRQARLVSDYRPISLCN
        K+  +    L S  S +E+ A I S P  K+PGP+GF A F+Q +  D++    +    + +  E ++   +    I LIPK  +    + ++RPISL N
Subjt:  KVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKY-WDIVGETTISSCLNILNSEASV-KEWNHTNIVLIPK-SRQARLVSDYRPISLCN

Query:  VSYKIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVT
        +  KI+ K+LANR++  +  II   Q  FI G     N+      ++++  K K K  +  + LD  KA+D+++  ++ K++ + G    +++++    +
Subjt:  VSYKIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVT

Query:  SPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQ
         P  +I +NGE    I    G RQG PLSPYLF +  + L+  +   + K + GI I +   KIS L  A+D +++I           N++  + +  G 
Subjt:  SPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQ

Query:  SVNLSKSMV-IFSKNVPYDTQQYLGNTLSMRVTESLGSYLGM
         +N +KSM  +++KN     ++ +  T    +  +   YLG+
Subjt:  SVNLSKSMV-IFSKNVPYDTQQYLGNTLSMRVTESLGSYLGM

P14381 Transposon TX1 uncharacterized 149 kDa protein2.6e-2827.89Show/hide
Query:  VTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSYK
        V++   +RL +  + +E+  A+R  P  K+PG +G    FFQ +WD +G                        + L+PK    RL+ ++RP+SL +  YK
Subjt:  VTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSYK

Query:  IVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTF
        IV K ++ RLK VL E+I   QS  + GR+I DN+ L  + L+F    R+  +  A L LD  KA+DRV+  YL   +    F   ++  +     S   
Subjt:  IVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWISLVMKCVTSPTF

Query:  SILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVNL
         + +N      +   RG+RQG PLS  L+ L  +    LL     K L G+ +     ++    +A+D +I +     +    +   + Y  AS   +N 
Subjt:  SILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNILKEYEKASGQSVNL

Query:  SKSMVIF--SKNVPYDTQQYLGNTLSMRVTESLGSYL
        SKS  +   S  V +    +   +   ++ + LG YL
Subjt:  SKSMVIF--SKNVPYDTQQYLGNTLSMRVTESLGSYL

P92555 Uncharacterized mitochondrial protein AtMg012502.2e-1149.25Show/hide
Query:  LLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKS-LAGISIARSCPKISHLFFAED
        ++NG   G + PSRG+RQGDPLSPYLF+LC + LS L    + +  L GI ++ + P+I+HL FA+D
Subjt:  LLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKS-LAGISIARSCPKISHLFFAED

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.0e-1438.46Show/hide
Query:  KVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSY
        +  D +  RL +L S +E+ AA+ + P  KAPGP+ F A FF + W +V ++TI++      +   +K +N T I LIPK      +S +RP+S C V Y
Subjt:  KVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVKEWNHTNIVLIPKSRQARLVSDYRPISLCNVSY

Query:  KIVT
        KI+T
Subjt:  KIVT

AT4G20520.1 RNA binding;RNA-directed DNA polymerases1.0e-1137.35Show/hide
Query:  LANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWI
        +  RLK ++  +I  +Q++FI GR  TDN++   E ++ + +++KG  G+  LKLD+ KAYDR+ W YL   +   GF   W+
Subjt:  LANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKIMGKLGFHSTWI

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)1.6e-1249.25Show/hide
Query:  LLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKS-LAGISIARSCPKISHLFFAED
        ++NG   G + PSRG+RQGDPLSPYLF+LC + LS L    + +  L GI ++ + P+I+HL FA+D
Subjt:  LLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKS-LAGISIARSCPKISHLFFAED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTGGCAAACAGACAAGGCAAATATTCAAGAAGCTTTTAACAACTACTTCACGGAAACTTTCTCTTCATCCATTACAGATCAAAGAGATATGGATGGTGTTCTT
AGTCATGTTCAACGGAAAAGTCACTGATGAGATGAATCAGCGATTATTAAGTCTGTATTCTCGTGAGGAGGTCTTGGCAGCTATTAGAAGCTTCCCTCCAACGAAAGCTC
CTGGACCGAATGGTTTCCCCGCAATATTTTTTCAAAAATATTGGGATATCGTAGGAGAAACAACTATTTCCAGCTGCTTGAATATTTTAAACTCGGAGGCATCGGTGAAG
GAGTGGAATCATACAAATATTGTCTTAATTCCAAAGAGTCGTCAGGCGAGGTTAGTCTCTGATTATCGACCCATTAGCTTATGTAACGTTTCTTATAAGATTGTTACCAA
GGTTTTGGCTAATAGACTTAAACTTGTTCTGAATGAGATTATCGATGAAAGCCAATCTGCTTTTATATCTGGTAGATCAATAACTGACAATATGATCCTGGGGCATGAAT
GTTTGAATTTTCTCTATAAGAAGCGTAAAGGGAAGGTGGGATACGCTGCTCTTAAATTAGATATGAGCAAGGCATACGACAGGGTAGAGTGGTCATACTTGCACAAAATT
ATGGGGAAACTGGGATTCCATTCTACTTGGATTTCTTTGGTTATGAAGTGTGTGACCTCTCCAACATTCTCAATTCTTTTGAATGGTGAGTCCTTTGGGTTTATCAAACC
TTCACGTGGGATTCGACAAGGGGATCCTTTATCTCCTTATTTATTCTTACTTTGTTATAAGGGCTTATCTGCGCTATTGGTATCAGATAGATCAAAATCTTTGGCTGGTA
TATCCATAGCTAGATCTTGTCCGAAAATCTCCCATCTCTTCTTTGCGGAAGACAGACTGATTTTCATAAAAGCAGCGGCCAAGGAGTTCGGGCATTTTAGAAATATTTTG
AAAGAATATGAAAAGGCATCTGGCCAATCGGTTAACCTTTCAAAATCTATGGTAATTTTCTCGAAAAATGTTCCTTATGATACCCAACAGTATTTGGGGAATACTCTATC
TATGAGGGTAACTGAATCTTTGGGATCATACCTTGGGATGCCCTCAAGTTTTAGTAGAGGTAAAACTCGAGATTTTAAATTCATTTTGGATAACGTCCGTCTTACACACT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTGGCAAACAGACAAGGCAAATATTCAAGAAGCTTTTAACAACTACTTCACGGAAACTTTCTCTTCATCCATTACAGATCAAAGAGATATGGATGGTGTTCTT
AGTCATGTTCAACGGAAAAGTCACTGATGAGATGAATCAGCGATTATTAAGTCTGTATTCTCGTGAGGAGGTCTTGGCAGCTATTAGAAGCTTCCCTCCAACGAAAGCTC
CTGGACCGAATGGTTTCCCCGCAATATTTTTTCAAAAATATTGGGATATCGTAGGAGAAACAACTATTTCCAGCTGCTTGAATATTTTAAACTCGGAGGCATCGGTGAAG
GAGTGGAATCATACAAATATTGTCTTAATTCCAAAGAGTCGTCAGGCGAGGTTAGTCTCTGATTATCGACCCATTAGCTTATGTAACGTTTCTTATAAGATTGTTACCAA
GGTTTTGGCTAATAGACTTAAACTTGTTCTGAATGAGATTATCGATGAAAGCCAATCTGCTTTTATATCTGGTAGATCAATAACTGACAATATGATCCTGGGGCATGAAT
GTTTGAATTTTCTCTATAAGAAGCGTAAAGGGAAGGTGGGATACGCTGCTCTTAAATTAGATATGAGCAAGGCATACGACAGGGTAGAGTGGTCATACTTGCACAAAATT
ATGGGGAAACTGGGATTCCATTCTACTTGGATTTCTTTGGTTATGAAGTGTGTGACCTCTCCAACATTCTCAATTCTTTTGAATGGTGAGTCCTTTGGGTTTATCAAACC
TTCACGTGGGATTCGACAAGGGGATCCTTTATCTCCTTATTTATTCTTACTTTGTTATAAGGGCTTATCTGCGCTATTGGTATCAGATAGATCAAAATCTTTGGCTGGTA
TATCCATAGCTAGATCTTGTCCGAAAATCTCCCATCTCTTCTTTGCGGAAGACAGACTGATTTTCATAAAAGCAGCGGCCAAGGAGTTCGGGCATTTTAGAAATATTTTG
AAAGAATATGAAAAGGCATCTGGCCAATCGGTTAACCTTTCAAAATCTATGGTAATTTTCTCGAAAAATGTTCCTTATGATACCCAACAGTATTTGGGGAATACTCTATC
TATGAGGGTAACTGAATCTTTGGGATCATACCTTGGGATGCCCTCAAGTTTTAGTAGAGGTAAAACTCGAGATTTTAAATTCATTTTGGATAACGTCCGTCTTACACACT
AA
Protein sequenceShow/hide protein sequence
MGFGKQTRQIFKKLLTTTSRKLSLHPLQIKEIWMVFLVMFNGKVTDEMNQRLLSLYSREEVLAAIRSFPPTKAPGPNGFPAIFFQKYWDIVGETTISSCLNILNSEASVK
EWNHTNIVLIPKSRQARLVSDYRPISLCNVSYKIVTKVLANRLKLVLNEIIDESQSAFISGRSITDNMILGHECLNFLYKKRKGKVGYAALKLDMSKAYDRVEWSYLHKI
MGKLGFHSTWISLVMKCVTSPTFSILLNGESFGFIKPSRGIRQGDPLSPYLFLLCYKGLSALLVSDRSKSLAGISIARSCPKISHLFFAEDRLIFIKAAAKEFGHFRNIL
KEYEKASGQSVNLSKSMVIFSKNVPYDTQQYLGNTLSMRVTESLGSYLGMPSSFSRGKTRDFKFILDNVRLTH