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Lag0042087 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042087
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc CCHC-type-like protein
Genome locationchr13:36263636..36264556
RNA-Seq ExpressionLag0042087
SyntenyLag0042087
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5443021.1 hypothetical protein F2P56_035618 [Juglans regia]1.0e-2128.96Show/hide
Query:  MGFTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHV
        M F    FW++  + PFA  N      +G ++GE +  D +     WG+ +R+RV++D++ PL RG  L    AK   W+ F+YER+P+FC+HCGKI HV
Subjt:  MGFTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHV

Query:  VKECLEIDGGK-SLKKEDFEFGGWMKFQGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSP------VYDGTEDLVEGGNDYLA
           C ++D GK SL+  + ++G W++    +   +G++S          +ET +   +G ++R G+G  V   +D+P      V  GTE++ E GN    
Subjt:  VKECLEIDGGK-SLKKEDFEFGGWMKFQGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSP------VYDGTEDLVEGGNDYLA

Query:  KSMRTNSEDSNWLVDQMGENELRNKQISEMAEGKNSDQMEISNQTKKR-----SKWKR----RIHTGRNEENFVDGE-----GSRKRKGEA-FGENVNKK
           ++ ++ S    ++ G + L    + +    +     +++N   +R      KWKR    R+ +   + N  D E      +RKRKG+   G  V K+
Subjt:  KSMRTNSEDSNWLVDQMGENELRNKQISEMAEGKNSDQMEISNQTKKR-----SKWKR----RIHTGRNEENFVDGE-----GSRKRKGEA-FGENVNKK

Query:  AKGLALDEGDMSDNLYLAAAGEQPCLSP
        +K   ++E +  + +  A A  Q C SP
Subjt:  AKGLALDEGDMSDNLYLAAAGEQPCLSP

KAF5443024.1 hypothetical protein F2P56_035621 [Juglans regia]3.5e-2230.28Show/hide
Query:  MGFTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHV
        M F    FW++  + PFA  N      +G ++GE +  D +     WG+ +R+RV++D++ PL RG  L    AK   W+ F+YER+P+FC+HCGKI HV
Subjt:  MGFTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHV

Query:  VKECLEIDGGK-SLKKEDFEFGGWMKFQGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSP------VYDGTEDLVEGGND---
           C ++D GK SL+  + ++G W++    +   +G++S +         ET +   +G ++R G+G  V   +D+P      V  GTE++ E GN    
Subjt:  VKECLEIDGGK-SLKKEDFEFGGWMKFQGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSP------VYDGTEDLVEGGND---

Query:  YLAKSMRTNSEDSNWLVDQMGENELRNKQISEMAEGKNSDQMEISNQTK-KRSKWKR----RIHTGRNEENFVDGE-----GSRKRKGEA-FGENVNKKA
        Y ++S    S +   +   +       K++ E  +        IS + K +  KWKR    R+ +   + N  D E      +RKRKG+   G  V K++
Subjt:  YLAKSMRTNSEDSNWLVDQMGENELRNKQISEMAEGKNSDQMEISNQTK-KRSKWKR----RIHTGRNEENFVDGE-----GSRKRKGEA-FGENVNKKA

Query:  KGLALDEGDMSDNLYLAAAGEQPCLSP
        K   ++EG+  + +  A A  Q C SP
Subjt:  KGLALDEGDMSDNLYLAAAGEQPCLSP

XP_018813590.2 uncharacterized protein LOC108985667 [Juglans regia]3.5e-2230.28Show/hide
Query:  MGFTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHV
        M F    FW++  + PFA  N      +G ++GE +  D +     WG+ +R+RV++D++ PL RG  L    AK   W+ F+YER+P+FC+HCGKI HV
Subjt:  MGFTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHV

Query:  VKECLEIDGGK-SLKKEDFEFGGWMKFQGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSP------VYDGTEDLVEGGND---
           C ++D GK SL+  + ++G W++    +   +G++S +         ET +   +G ++R G+G  V   +D+P      V  GTE++ E GN    
Subjt:  VKECLEIDGGK-SLKKEDFEFGGWMKFQGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSP------VYDGTEDLVEGGND---

Query:  YLAKSMRTNSEDSNWLVDQMGENELRNKQISEMAEGKNSDQMEISNQTK-KRSKWKR----RIHTGRNEENFVDGE-----GSRKRKGEA-FGENVNKKA
        Y ++S    S +   +   +       K++ E  +        IS + K +  KWKR    R+ +   + N  D E      +RKRKG+   G  V K++
Subjt:  YLAKSMRTNSEDSNWLVDQMGENELRNKQISEMAEGKNSDQMEISNQTK-KRSKWKR----RIHTGRNEENFVDGE-----GSRKRKGEA-FGENVNKKA

Query:  KGLALDEGDMSDNLYLAAAGEQPCLSP
        K   ++EG+  + +  A A  Q C SP
Subjt:  KGLALDEGDMSDNLYLAAAGEQPCLSP

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.2e-2331.73Show/hide
Query:  FTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVK
        F +V FWI + +LP ++ N+T+A ++GN +G F+  D N+    WG ++RIRVL+DI+ PLRRG  +  +     CW+  +YER+PDFC+ CG IGH   
Subjt:  FTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVK

Query:  EC-LEIDGGKSLKKEDFEFGGWMKF----QGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSPVYDGTEDLVEGGNDYLAKSMR
        +C       +   +   E+G W++F     G  +  KG   ++ D     +  + E G    +++  E TN D  Q     + T D    G    A    
Subjt:  EC-LEIDGGKSLKKEDFEFGGWMKF----QGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSPVYDGTEDLVEGGNDYLAKSMR

Query:  TNSEDSNW
           E ++W
Subjt:  TNSEDSNW

XP_035542094.1 uncharacterized protein LOC118344802 [Juglans regia]1.0e-2128.96Show/hide
Query:  MGFTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHV
        M F    FW++  + PFA  N      +G ++GE +  D +     WG+ +R+RV++D++ PL RG  L    AK   W+ F+YER+P+FC+HCGKI HV
Subjt:  MGFTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHV

Query:  VKECLEIDGGK-SLKKEDFEFGGWMKFQGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSP------VYDGTEDLVEGGNDYLA
           C ++D GK SL+  + ++G W++    +   +G++S          +ET +   +G ++R G+G  V   +D+P      V  GTE++ E GN    
Subjt:  VKECLEIDGGK-SLKKEDFEFGGWMKFQGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSP------VYDGTEDLVEGGNDYLA

Query:  KSMRTNSEDSNWLVDQMGENELRNKQISEMAEGKNSDQMEISNQTKKR-----SKWKR----RIHTGRNEENFVDGE-----GSRKRKGEA-FGENVNKK
           ++ ++ S    ++ G + L    + +    +     +++N   +R      KWKR    R+ +   + N  D E      +RKRKG+   G  V K+
Subjt:  KSMRTNSEDSNWLVDQMGENELRNKQISEMAEGKNSDQMEISNQTKKR-----SKWKR----RIHTGRNEENFVDGE-----GSRKRKGEA-FGENVNKK

Query:  AKGLALDEGDMSDNLYLAAAGEQPCLSP
        +K   ++E +  + +  A A  Q C SP
Subjt:  AKGLALDEGDMSDNLYLAAAGEQPCLSP

TrEMBL top hitse value%identityAlignment
A0A2I4E2H1 uncharacterized protein LOC1089856671.7e-2230.28Show/hide
Query:  MGFTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHV
        M F    FW++  + PFA  N      +G ++GE +  D +     WG+ +R+RV++D++ PL RG  L    AK   W+ F+YER+P+FC+HCGKI HV
Subjt:  MGFTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHV

Query:  VKECLEIDGGK-SLKKEDFEFGGWMKFQGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSP------VYDGTEDLVEGGND---
           C ++D GK SL+  + ++G W++    +   +G++S +         ET +   +G ++R G+G  V   +D+P      V  GTE++ E GN    
Subjt:  VKECLEIDGGK-SLKKEDFEFGGWMKFQGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSP------VYDGTEDLVEGGND---

Query:  YLAKSMRTNSEDSNWLVDQMGENELRNKQISEMAEGKNSDQMEISNQTK-KRSKWKR----RIHTGRNEENFVDGE-----GSRKRKGEA-FGENVNKKA
        Y ++S    S +   +   +       K++ E  +        IS + K +  KWKR    R+ +   + N  D E      +RKRKG+   G  V K++
Subjt:  YLAKSMRTNSEDSNWLVDQMGENELRNKQISEMAEGKNSDQMEISNQTK-KRSKWKR----RIHTGRNEENFVDGE-----GSRKRKGEA-FGENVNKKA

Query:  KGLALDEGDMSDNLYLAAAGEQPCLSP
        K   ++EG+  + +  A A  Q C SP
Subjt:  KGLALDEGDMSDNLYLAAAGEQPCLSP

A0A6J1DU55 uncharacterized protein LOC1110231351.5e-2331.73Show/hide
Query:  FTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVK
        F +V FWI + +LP ++ N+T+A ++GN +G F+  D N+    WG ++RIRVL+DI+ PLRRG  +  +     CW+  +YER+PDFC+ CG IGH   
Subjt:  FTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVK

Query:  EC-LEIDGGKSLKKEDFEFGGWMKF----QGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSPVYDGTEDLVEGGNDYLAKSMR
        +C       +   +   E+G W++F     G  +  KG   ++ D     +  + E G    +++  E TN D  Q     + T D    G    A    
Subjt:  EC-LEIDGGKSLKKEDFEFGGWMKF----QGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSPVYDGTEDLVEGGNDYLAKSMR

Query:  TNSEDSNW
           E ++W
Subjt:  TNSEDSNW

A0A803P0N0 Uncharacterized protein2.2e-2240.48Show/hide
Query:  TKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVKE
        +   FW++I  LPF  +++  A  +GN +GEFI   E      WG  +RIRV L ++ PL RG M+     K+  W+ FRYER+P+FCF CG++GH  ++
Subjt:  TKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVKE

Query:  CL----EIDGGKSLKKEDFEFGGWMK
        C+     +D G     EDFE+G W+K
Subjt:  CL----EIDGGKSLKKEDFEFGGWMK

A0A803PUL2 Uncharacterized protein2.9e-2240.48Show/hide
Query:  FWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVKECLE-
        FW++I  LPF  +++ +A  +GN +GEF+   ++  +  WG+ +R+RV L  + PL RG M+R    K+  WV FRYER+P+FCF CG++GH  + C+  
Subjt:  FWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVKECLE-

Query:  IDGGKSLKKEDFEFGGWMKFQGFNRN
        I+   S   +DF++G WMK + F++N
Subjt:  IDGGKSLKKEDFEFGGWMKFQGFNRN

A0A803QHU2 Uncharacterized protein2.9e-2240.98Show/hide
Query:  FWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVKECL--
        FW++I  LPF  ++  +A  +GN +GEF+   ++  +  WG  +RIRV L ++ PL RG M++  + K+  WV FRYER+P+FCF CG +GH  K C+  
Subjt:  FWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVKECL--

Query:  --EIDGGKSLKKEDFEFGGWMK
           +D G     +DF++G WMK
Subjt:  --EIDGGKSLKKEDFEFGGWMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17920.1 nucleic acid binding;zinc ion binding3.1e-0829.7Show/hide
Query:  TKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVKE
        T ++ W+++  +PF Y +E  A +I   +G  I  D +  ++     IR+RV + I++ L R F   T E+ E   + F+YER+   C +C +  H    
Subjt:  TKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVKE

Query:  C
        C
Subjt:  C


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTACAAAGGTTGAATTCTGGATAAGGATCATAAATCTCCCATTTGCCTATAGGAATGAGACCATTGCAAGGAAAATTGGGAACAACTTAGGAGAATTTATAAG
ATGGGATGAAAATCAGTATTCCAATCCATGGGGGAATAATATAAGGATTAGAGTTCTTCTAGACATATCAAATCCCCTTAGAAGAGGTTTCATGTTAAGAACTGAAGAGG
CAAAGGAAAGGTGCTGGGTTACTTTCAGATATGAAAGAATTCCTGATTTCTGCTTTCATTGTGGGAAAATAGGTCATGTGGTCAAGGAATGTTTGGAGATTGATGGAGGC
AAAAGCTTAAAGAAGGAAGATTTCGAATTTGGTGGATGGATGAAATTCCAGGGGTTTAATAGGAATGTCAAAGGGACTGAATCTTCAAAGAATGATGAGAAAGTGCCGGA
AAATCAGGAGACCGATGAAGAAGGAAGAGCGGGAAAAGAAAGAAGAGCTGGTGAGGGCACTAATGTTGATCTTAATCAAGATAGTCCAGTTTACGATGGAACAGAAGATC
TAGTGGAAGGAGGGAACGATTACCTTGCAAAAAGTATGAGAACAAACTCAGAAGATAGTAACTGGCTGGTAGATCAAATGGGAGAAAATGAATTAAGAAATAAGCAAATT
TCTGAGATGGCAGAAGGGAAGAACTCAGACCAAATGGAAATTTCAAATCAGACAAAAAAGAGGTCAAAATGGAAGAGAAGAATACACACAGGAAGGAATGAGGAAAACTT
TGTAGATGGTGAGGGATCAAGGAAAAGAAAGGGTGAAGCTTTTGGCGAGAACGTAAATAAAAAAGCAAAAGGATTGGCATTAGATGAAGGGGATATGAGTGATAACCTGT
ATTTGGCAGCAGCTGGAGAGCAGCCCTGCCTTTCACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTACAAAGGTTGAATTCTGGATAAGGATCATAAATCTCCCATTTGCCTATAGGAATGAGACCATTGCAAGGAAAATTGGGAACAACTTAGGAGAATTTATAAG
ATGGGATGAAAATCAGTATTCCAATCCATGGGGGAATAATATAAGGATTAGAGTTCTTCTAGACATATCAAATCCCCTTAGAAGAGGTTTCATGTTAAGAACTGAAGAGG
CAAAGGAAAGGTGCTGGGTTACTTTCAGATATGAAAGAATTCCTGATTTCTGCTTTCATTGTGGGAAAATAGGTCATGTGGTCAAGGAATGTTTGGAGATTGATGGAGGC
AAAAGCTTAAAGAAGGAAGATTTCGAATTTGGTGGATGGATGAAATTCCAGGGGTTTAATAGGAATGTCAAAGGGACTGAATCTTCAAAGAATGATGAGAAAGTGCCGGA
AAATCAGGAGACCGATGAAGAAGGAAGAGCGGGAAAAGAAAGAAGAGCTGGTGAGGGCACTAATGTTGATCTTAATCAAGATAGTCCAGTTTACGATGGAACAGAAGATC
TAGTGGAAGGAGGGAACGATTACCTTGCAAAAAGTATGAGAACAAACTCAGAAGATAGTAACTGGCTGGTAGATCAAATGGGAGAAAATGAATTAAGAAATAAGCAAATT
TCTGAGATGGCAGAAGGGAAGAACTCAGACCAAATGGAAATTTCAAATCAGACAAAAAAGAGGTCAAAATGGAAGAGAAGAATACACACAGGAAGGAATGAGGAAAACTT
TGTAGATGGTGAGGGATCAAGGAAAAGAAAGGGTGAAGCTTTTGGCGAGAACGTAAATAAAAAAGCAAAAGGATTGGCATTAGATGAAGGGGATATGAGTGATAACCTGT
ATTTGGCAGCAGCTGGAGAGCAGCCCTGCCTTTCACCATGA
Protein sequenceShow/hide protein sequence
MGFTKVEFWIRIINLPFAYRNETIARKIGNNLGEFIRWDENQYSNPWGNNIRIRVLLDISNPLRRGFMLRTEEAKERCWVTFRYERIPDFCFHCGKIGHVVKECLEIDGG
KSLKKEDFEFGGWMKFQGFNRNVKGTESSKNDEKVPENQETDEEGRAGKERRAGEGTNVDLNQDSPVYDGTEDLVEGGNDYLAKSMRTNSEDSNWLVDQMGENELRNKQI
SEMAEGKNSDQMEISNQTKKRSKWKRRIHTGRNEENFVDGEGSRKRKGEAFGENVNKKAKGLALDEGDMSDNLYLAAAGEQPCLSP