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Lag0042091 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042091
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr13:36315763..36316665
RNA-Seq ExpressionLag0042091
SyntenyLag0042091
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN70928.1 hypothetical protein VITISV_016057 [Vitis vinifera]1.1e-2439.11Show/hide
Query:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVL-------QNVLSRLASTVVDRGV
        +A FQD W+ IK D  +VF +     II+   N +++ L+ KK ++ K+ DF PI L+T  YKII K L  RLR VL       Q+VLSR+     +R +
Subjt:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVL-------QNVLSRLASTVVDRGV

Query:  VEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKMISWASWVGCEA
        +EGF VG +  ++SHL F DDT+ F   +E     L  LL  F  ISGLK+N  +S++  IN + + +   A  + C+A
Subjt:  VEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKMISWASWVGCEA

RVW51217.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.9e-2234.12Show/hide
Query:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQ----------------------
        +A FQD W+ IK D  +VF K    GII+ + N +++ L+ KK    K+ +F PI L+TS YKII + L  RLR VL                       
Subjt:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQ----------------------

Query:  -----------------NVLSRLASTVVDRGVVEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKM
                         +VLSR+     +R ++EGF VG +  +++HL F DDT+FF   +E   + L  LL  F  ISGLK+N  KS+I  IN + + +
Subjt:  -----------------NVLSRLASTVVDRGVVEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKM

Query:  ISWASWVGCEA
           A  + C+A
Subjt:  ISWASWVGCEA

VVA31869.1 Hypothetical predicted protein, partial [Prunus dulcis]2.6e-2331.42Show/hide
Query:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQN---------------------
        M+FFQ  WE +K D  KV    F+ GI++G  NET++CLI KK  ++KV DF PI LVTS YK+I+K L  RLR+VL N                     
Subjt:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQN---------------------

Query:  -------------------------------------------------------------------VLSRLASTVVDRGVVEGFMVGLDELQLSHLPFT
                                                                           VLSR+     D  +V G + G D++++SHL F 
Subjt:  -------------------------------------------------------------------VLSRLASTVVDRGVVEGFMVGLDELQLSHLPFT

Query:  DDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKMISWASWVGCEAG
        DDT+FF   KE  + NL  +L  F  +SG+KIN+ KS I+ IN     + + A   GCE G
Subjt:  DDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKMISWASWVGCEAG

XP_028084362.1 uncharacterized protein LOC114285516 [Camellia sinensis]3.4e-2335.94Show/hide
Query:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQNVLS--RLASTVVD--------
        MA F D W+ +K D  +VF + FE G ++   N +++CLI K  K++K+ DF PI LVTS YKI+A  L +R+  VL+  +S  ++A+ V++        
Subjt:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQNVLS--RLASTVVD--------

Query:  -----------------------RGVVEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHS
                               +GV+EGF+VG   + ++HL F DDT FF   +ES   +L  +L  FE +SGL +N +KSS++ IN E +
Subjt:  -----------------------RGVVEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHS

XP_028112207.1 uncharacterized protein LOC114310430 [Camellia sinensis]2.1e-2535.68Show/hide
Query:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQNVLSR----------------L
        MA F D W+ +K D  +VF + FE G ++   N T++CLI K  K++K+ DF PI LVTS YKI+AK L +R+  VL+  +                  +
Subjt:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQNVLSR----------------L

Query:  ASTVVD-----------------------RGVVEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKM
        A+ V++                       +GV+EGF+VG D + ++HL F DDT FF   +ES   +L  +L  FE +SGL +N +KSS++ IN E S +
Subjt:  ASTVVD-----------------------RGVVEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKM

Query:  ISWASWVGCEAGL
           A  +GC   L
Subjt:  ISWASWVGCEAGL

TrEMBL top hitse value%identityAlignment
A0A438EU27 Transposon TX1 uncharacterized 149 kDa protein1.4e-2234.12Show/hide
Query:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQ----------------------
        +A FQD W+ IK D  +VF K    GII+ + N +++ L+ KK    K+ +F PI L+TS YKII + L  RLR VL                       
Subjt:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQ----------------------

Query:  -----------------NVLSRLASTVVDRGVVEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKM
                         +VLSR+     +R ++EGF VG +  +++HL F DDT+FF   +E   + L  LL  F  ISGLK+N  KS+I  IN + + +
Subjt:  -----------------NVLSRLASTVVDRGVVEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKM

Query:  ISWASWVGCEA
           A  + C+A
Subjt:  ISWASWVGCEA

A0A438I0Z7 LINE-1 retrotransposable element ORF2 protein2.4e-2231.9Show/hide
Query:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRK-------------------------
        +A FQD WE IK D  KVF +    GII+ + N +++ L+ KK  + ++ DF PI L+TS YKIIAK L  R+R+                         
Subjt:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRK-------------------------

Query:  -----------------------------------VLQNVLSRLASTVVDRGVVEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAIS
                                           ++ +VLSR+     +R V+EGF VG +  ++SHL F DDT+FF   +E     L  +L  F  IS
Subjt:  -----------------------------------VLQNVLSRLASTVVDRGVVEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAIS

Query:  GLKINRHKSSIMSINCEHSKMISWASWVGCEA
        GLK+N  KS+I  IN E + +   A  + C+A
Subjt:  GLKINRHKSSIMSINCEHSKMISWASWVGCEA

A0A438I435 Transposon TX1 uncharacterized 149 kDa protein2.4e-2233.64Show/hide
Query:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQ----------------------
        +A FQ+ W+ IK D  +VF +    GII+ + N +++ LI KK  + ++ DF  I L+TS YKIIAK L  RLR VL                       
Subjt:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQ----------------------

Query:  -----------------------NVLSRLASTVVDRGVVEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSIN
                               +VLSR+     +R ++EGF VG +  +++HL F DDT+FF   +E   + L  LL  F  ISGLK+N +KSSI  IN
Subjt:  -----------------------NVLSRLASTVVDRGVVEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSIN

Query:  CEHSKMISWASWVGCEA
         + + +   A  + C+A
Subjt:  CEHSKMISWASWVGCEA

A0A5E4FWN6 Reverse transcriptase domain-containing protein (Fragment)1.3e-2331.42Show/hide
Query:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQN---------------------
        M+FFQ  WE +K D  KV    F+ GI++G  NET++CLI KK  ++KV DF PI LVTS YK+I+K L  RLR+VL N                     
Subjt:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQN---------------------

Query:  -------------------------------------------------------------------VLSRLASTVVDRGVVEGFMVGLDELQLSHLPFT
                                                                           VLSR+     D  +V G + G D++++SHL F 
Subjt:  -------------------------------------------------------------------VLSRLASTVVDRGVVEGFMVGLDELQLSHLPFT

Query:  DDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKMISWASWVGCEAG
        DDT+FF   KE  + NL  +L  F  +SG+KIN+ KS I+ IN     + + A   GCE G
Subjt:  DDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKMISWASWVGCEAG

A5C6D8 Reverse transcriptase domain-containing protein5.1e-2539.11Show/hide
Query:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVL-------QNVLSRLASTVVDRGV
        +A FQD W+ IK D  +VF +     II+   N +++ L+ KK ++ K+ DF PI L+T  YKII K L  RLR VL       Q+VLSR+     +R +
Subjt:  MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVL-------QNVLSRLASTVVDRGV

Query:  VEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKMISWASWVGCEA
        +EGF VG +  ++SHL F DDT+ F   +E     L  LL  F  ISGLK+N  +S++  IN + + +   A  + C+A
Subjt:  VEGFMVGLDELQLSHLPFTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKMISWASWVGCEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTTTTTCAAGATAATTGGGAAGGTATCAAGCATGATCCTTGGAAAGTGTTCCTCAAGTCTTTTGAGGGGGGTATTATTGATGGGGCTATGAATGAAACCTATGT
CTGTTTGATCTCCAAAAAAGAGAAAGCCATTAAAGTCAAAGACTTTGGACCTATCATTCTGGTGACTAGTTTTTATAAAATTATTGCTAAAACCTTGGTCGATAGACTTC
GAAAAGTTCTCCAAAATGTCTTGAGTAGGTTAGCGTCAACGGTTGTGGATAGGGGAGTGGTGGAAGGTTTTATGGTGGGTTTGGATGAGTTGCAGTTGTCGCATCTCCCA
TTCACTGATGACACCCTTTTCTTTTGCTTTGAGAAGGAAAGTTCCTTTAGGAACCTAAATGGCTTGCTGTCTTTCTTTGAAGCTATCTCTGGTCTCAAAATCAATCGCCA
TAAAAGCTCTATCATGAGTATTAATTGTGAGCATTCCAAGATGATTTCTTGGGCCTCATGGGTTGGGTGTGAAGCGGGGTTGGGTGTGAAGCGAGCAGGCTCCCTTGTTC
TTATGCGACCTTCCTCTTGGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTTTTTCAAGATAATTGGGAAGGTATCAAGCATGATCCTTGGAAAGTGTTCCTCAAGTCTTTTGAGGGGGGTATTATTGATGGGGCTATGAATGAAACCTATGT
CTGTTTGATCTCCAAAAAAGAGAAAGCCATTAAAGTCAAAGACTTTGGACCTATCATTCTGGTGACTAGTTTTTATAAAATTATTGCTAAAACCTTGGTCGATAGACTTC
GAAAAGTTCTCCAAAATGTCTTGAGTAGGTTAGCGTCAACGGTTGTGGATAGGGGAGTGGTGGAAGGTTTTATGGTGGGTTTGGATGAGTTGCAGTTGTCGCATCTCCCA
TTCACTGATGACACCCTTTTCTTTTGCTTTGAGAAGGAAAGTTCCTTTAGGAACCTAAATGGCTTGCTGTCTTTCTTTGAAGCTATCTCTGGTCTCAAAATCAATCGCCA
TAAAAGCTCTATCATGAGTATTAATTGTGAGCATTCCAAGATGATTTCTTGGGCCTCATGGGTTGGGTGTGAAGCGGGGTTGGGTGTGAAGCGAGCAGGCTCCCTTGTTC
TTATGCGACCTTCCTCTTGGGGGTAA
Protein sequenceShow/hide protein sequence
MAFFQDNWEGIKHDPWKVFLKSFEGGIIDGAMNETYVCLISKKEKAIKVKDFGPIILVTSFYKIIAKTLVDRLRKVLQNVLSRLASTVVDRGVVEGFMVGLDELQLSHLP
FTDDTLFFCFEKESSFRNLNGLLSFFEAISGLKINRHKSSIMSINCEHSKMISWASWVGCEAGLGVKRAGSLVLMRPSSWG