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Lag0042096 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042096
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr13:36356167..36356577
RNA-Seq ExpressionLag0042096
SyntenyLag0042096
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031954.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]1.1e-1538.64Show/hide
Query:  NSFSKAMTENKMVQQNPVNKGKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEP
        N F+KA  +     Q    KGK+V+T      K  E  N  ++ + Y  P+LGKCF C QTGHLSN CPQ++T  +AD  +    ++  D ++  + +E 
Subjt:  NSFSKAMTENKMVQQNPVNKGKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEP

Query:  DEGEPISLVIQQ-LLAPKSDPSYQRHALFKTR
        D G+ +S ++Q+ LLAP+ +   QRH+ FKTR
Subjt:  DEGEPISLVIQQ-LLAPKSDPSYQRHALFKTR

KAA0059834.1 uncharacterized protein E6C27_scaffold108G001170 [Cucumis melo var. makuwa]2.9e-1638.35Show/hide
Query:  SFSKAMTENKMVQQNPVNK--GKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLE
        +FSK  + +    + P     GK  + +     K  +  +  ++ +TY RP+L KCF C Q+GHLSN CPQR+T  +AD       +D+ + ++  +F+E
Subjt:  SFSKAMTENKMVQQNPVNK--GKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLE

Query:  PDEGEPISLVIQQ-LLAPKSDPSYQRHALFKTR
         D+G+ IS VIQ+ L+APK + + QRH+LFKTR
Subjt:  PDEGEPISLVIQQ-LLAPKSDPSYQRHALFKTR

XP_022138328.1 uncharacterized protein LOC111009540 isoform X2 [Momordica charantia]5.4e-1546.74Show/hide
Query:  NNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEPDEGEPISLVIQQLLAPKSDPSYQRHALFKT
        ++KR ++ Y RPTLGKCF C Q  HLSNECPQR+   + D  D  + D +  T+D+  ++EPDEG+ +S V+Q++L PK +   QR++LF+T
Subjt:  NNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEPDEGEPISLVIQQLLAPKSDPSYQRHALFKT

XP_031743026.1 uncharacterized protein LOC116404533 [Cucumis sativus]4.1e-1544.25Show/hide
Query:  KGKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEPDEGEPISLVIQQLL-APKS
        KGK+++       +  E        + Y+RP+LGKCF C QTGHLSN CPQR+T  IA+    Q  +D  + ++ T+ +E D+GE +S VIQ+LL  PK 
Subjt:  KGKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEPDEGEPISLVIQQLL-APKS

Query:  DPSYQRHALFKTR
        + + QRH LFKTR
Subjt:  DPSYQRHALFKTR

XP_031745468.1 uncharacterized protein LOC116405837 [Cucumis sativus]3.2e-1544.25Show/hide
Query:  KGKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEPDEGEPISLVIQQLL-APKS
        KGK+++       +  E        + Y+RP+LGKCF C QTGHLSN CPQR+T  IA++   Q  +D  + ++ T+ +E D+GE +S VIQ+LL  PK 
Subjt:  KGKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEPDEGEPISLVIQQLL-APKS

Query:  DPSYQRHALFKTR
        + + QRH LFKTR
Subjt:  DPSYQRHALFKTR

TrEMBL top hitse value%identityAlignment
A0A5A7SLA2 Zf-CCHC domain-containing protein5.3e-1638.64Show/hide
Query:  NSFSKAMTENKMVQQNPVNKGKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEP
        N F+KA  +     Q    KGK+V+T      K  E  N  ++ + Y  P+LGKCF C QTGHLSN CPQ++T  +AD  +    ++  D ++  + +E 
Subjt:  NSFSKAMTENKMVQQNPVNKGKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEP

Query:  DEGEPISLVIQQ-LLAPKSDPSYQRHALFKTR
        D G+ +S ++Q+ LLAP+ +   QRH+ FKTR
Subjt:  DEGEPISLVIQQ-LLAPKSDPSYQRHALFKTR

A0A5A7UXS4 CCHC-type domain-containing protein1.4e-1638.35Show/hide
Query:  SFSKAMTENKMVQQNPVNK--GKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLE
        +FSK  + +    + P     GK  + +     K  +  +  ++ +TY RP+L KCF C Q+GHLSN CPQR+T  +AD       +D+ + ++  +F+E
Subjt:  SFSKAMTENKMVQQNPVNK--GKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLE

Query:  PDEGEPISLVIQQ-LLAPKSDPSYQRHALFKTR
         D+G+ IS VIQ+ L+APK + + QRH+LFKTR
Subjt:  PDEGEPISLVIQQ-LLAPKSDPSYQRHALFKTR

A0A5D3C3X9 Reverse transcriptase7.6e-1540.44Show/hide
Query:  SFSKAMTE-NKMVQQNP----VNKGKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTD
        SF++ + E N +  +NP      KGK+VET    + K  E +N  +  + Y RP+LGKCF C Q GH SN CPQR+T  +AD  +    +   + ++   
Subjt:  SFSKAMTE-NKMVQQNP----VNKGKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTD

Query:  FLEPDEGEPISLVIQQ-LLAPKSDPSYQRHALFKTR
         +E D+G  +S VIQ+ LLAPK + + Q H+LFKTR
Subjt:  FLEPDEGEPISLVIQQ-LLAPKSDPSYQRHALFKTR

A0A6J1CAS9 uncharacterized protein LOC111009540 isoform X12.6e-1546.74Show/hide
Query:  NNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEPDEGEPISLVIQQLLAPKSDPSYQRHALFKT
        ++KR ++ Y RPTLGKCF C Q  HLSNECPQR+   + D  D  + D +  T+D+  ++EPDEG+ +S V+Q++L PK +   QR++LF+T
Subjt:  NNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEPDEGEPISLVIQQLLAPKSDPSYQRHALFKT

A0A6J1CCQ8 uncharacterized protein LOC111009540 isoform X22.6e-1546.74Show/hide
Query:  NNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEPDEGEPISLVIQQLLAPKSDPSYQRHALFKT
        ++KR ++ Y RPTLGKCF C Q  HLSNECPQR+   + D  D  + D +  T+D+  ++EPDEG+ +S V+Q++L PK +   QR++LF+T
Subjt:  NNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEPDEGEPISLVIQQLLAPKSDPSYQRHALFKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGATCAAGGCAATTCATTTAGTAAAGCTATGACAGAAAACAAAATGGTTCAACAAAATCCTGTAAACAAAGGCAAACAAGTGGAAACTAATGTTTCCCGAGAGAT
CAAGAATTCGGAAGGATTGAACAACAAGCGAGCTTCCAGTACATACGCCAGGCCAACCCTTGGTAAATGCTTTCATTGCAATCAGACCGGTCATTTGTCCAACGAATGCC
CTCAAAGACAGACCTTTTTAATTGCTGACAATGTGGATTATCAAGATGATGACGATGAGCATGACACAGACGACAACACTGATTTTCTTGAACCTGATGAAGGGGAGCCA
ATTTCCTTAGTAATTCAACAACTCCTTGCTCCAAAATCTGACCCAAGCTACCAACGCCACGCCTTGTTCAAGACTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGATCAAGGCAATTCATTTAGTAAAGCTATGACAGAAAACAAAATGGTTCAACAAAATCCTGTAAACAAAGGCAAACAAGTGGAAACTAATGTTTCCCGAGAGAT
CAAGAATTCGGAAGGATTGAACAACAAGCGAGCTTCCAGTACATACGCCAGGCCAACCCTTGGTAAATGCTTTCATTGCAATCAGACCGGTCATTTGTCCAACGAATGCC
CTCAAAGACAGACCTTTTTAATTGCTGACAATGTGGATTATCAAGATGATGACGATGAGCATGACACAGACGACAACACTGATTTTCTTGAACCTGATGAAGGGGAGCCA
ATTTCCTTAGTAATTCAACAACTCCTTGCTCCAAAATCTGACCCAAGCTACCAACGCCACGCCTTGTTCAAGACTCGATGA
Protein sequenceShow/hide protein sequence
MGDQGNSFSKAMTENKMVQQNPVNKGKQVETNVSREIKNSEGLNNKRASSTYARPTLGKCFHCNQTGHLSNECPQRQTFLIADNVDYQDDDDEHDTDDNTDFLEPDEGEP
ISLVIQQLLAPKSDPSYQRHALFKTR