; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0042116 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042116
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr13:36801206..36803942
RNA-Seq ExpressionLag0042116
SyntenyLag0042116
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2725981.1 hypothetical protein I3760_01G090600 [Carya illinoinensis]2.8e-1650.55Show/hide
Query:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPI
        D NE+L   +K  G  R  RLM  FR V+DDCNL+DLGF G  YTWCNRR +   VS RLDRFI   ++ + FP+  V+H      DH PI
Subjt:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPI

XP_022158772.1 uncharacterized protein LOC111025237 [Momordica charantia]1.7e-1645.36Show/hide
Query:  LNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTELTRL
        +N ILW+++ S   + D   +  FR V+D C+L D+GF G  +TWCN R  GDQ+   LDRF+ N +F SLFP+  ++H  W+K DHR IG  L  L
Subjt:  LNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTELTRL

XP_035543588.1 uncharacterized protein LOC118347675 [Juglans regia]4.8e-1652.63Show/hide
Query:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTEL
        DLNEIL+ ++K  G  R  R + DFR VL+DC+L DLGF G  +TW NRRED   VS RLDRF+ NS + + FPN  V H   A  D+ PI  EL
Subjt:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTEL

XP_042944747.1 uncharacterized protein LOC122278633 [Carya illinoinensis]2.2e-1646.88Show/hide
Query:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTELT
        D NEI+ +++KS G +R    M  F++V+++C+L DLGF G+ +TWCNRRE G  +S RLDRF  N  + SL+P   V+H   A  DH PI  +LT
Subjt:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTELT

XP_042972796.1 uncharacterized protein LOC122304603 [Carya illinoinensis]1.7e-1651.65Show/hide
Query:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPI
        D NE+L   +K  G  R   LM  FR VLDDCNL+DLGF G  YTWCNRR +   VS RLDRF+   N+ + FP   V+H   A  DH PI
Subjt:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPI

TrEMBL top hitse value%identityAlignment
A0A2N9FK76 Reverse transcriptase domain-containing protein1.7e-1440.83Show/hide
Query:  ALIHEDY-LLECSWVGEPMDISKSDLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNH
        AL+H+ Y L +  WV         D NEI    +K     R  R M +FRE L DC+LMDLGF+G  +TW N RED   V +RLDR + + N+ +LFPN 
Subjt:  ALIHEDY-LLECSWVGEPMDISKSDLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNH

Query:  LVLHQDWAKLDHRPIGTELT
         V H  +   DH  +  ++T
Subjt:  LVLHQDWAKLDHRPIGTELT

A0A5C7IIT4 Uncharacterized protein1.3e-1444.79Show/hide
Query:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTELT
        D NEI+  ++K  G TR    M +F+E L+DC L DLGFLG  +TW NRR+    +  RLDR +GN+ +  LF    + H D+ K DHRPI  E++
Subjt:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTELT

A0A6J1DY29 uncharacterized protein LOC1110252378.1e-1745.36Show/hide
Query:  LNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTELTRL
        +N ILW+++ S   + D   +  FR V+D C+L D+GF G  +TWCN R  GDQ+   LDRF+ N +F SLFP+  ++H  W+K DHR IG  L  L
Subjt:  LNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTELTRL

A0A6P9EHH7 uncharacterized protein LOC1183476752.3e-1652.63Show/hide
Query:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTEL
        DLNEIL+ ++K  G  R  R + DFR VL+DC+L DLGF G  +TW NRRED   VS RLDRF+ NS + + FPN  V H   A  D+ PI  EL
Subjt:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTEL

A0A6P9EM92 uncharacterized protein LOC1089797761.5e-1549.45Show/hide
Query:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPI
        D NE+L  ++K  G TR    M  FREVL DC+L D+GF G  +TW N RE  + +S RLDRF+GN++F  LFP  +V H   A  DH PI
Subjt:  DLNEILWDNDKSEGPTRDHRLMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCATGTTTTATTTCATCGCTTAGGGTTTAGGATCTTCTTGGTAGGGGCTGAATGGAACCTAATCATGAGCCTGGTGGGGGAAGGTACTTCAAAGTCGGCAATGAA
GTTACGACAACCTCCAATACCGGTCCAAAAGTCCCACCGACGACAAGTGGTCAATCTCAGTCCTGCCCACTACTCCTTTTCCAACGAAACGATGGGATGCAGTAAGGGGA
AAGAAAAGCAACTATTCGAAATTTTCAACACTGCAGATTCGAGGGGCGATTCACAGACTGTTGCAGATGTTTCCTTGAAGTCGAATCTGCCTAAGAAGGCGAAAGGGGAT
GGGTCTGATCCGTTGGCGAGTCAATGGTCGTCGGATTATTCCTTGCCTGCGACTGGCGTTGGTGATAACGAGAAGAAGCAAAACCCCACAAGCGTTATTATTGCTACTGA
AGGATGGGCCAATATTGTTATCTCTGATAACATAAAGTGTCCAAAGATGGAAGAGGAGTATGATAAGGAGGCGGGGACTGCTGGACAACCCGCCTTGATCCATGAAGATT
ATCTATTGGAATGTTCGTGGGTTGGAGAGCCCATGGACATTTCGAAAAGTGATCTTAATGAGATTCTTTGGGACAATGACAAGTCAGAAGGTCCTACGCGGGACCATCGC
CTGATGATGGATTTTAGGGAGGTCTTGGATGACTGCAATCTCATGGATTTGGGCTTTTTAGGCAGCACTTATACTTGGTGCAATAGGAGAGAAGATGGTGATCAAGTGAG
CTTACGCCTAGATCGTTTTATTGGAAACTCTAATTTCGGTTCTCTGTTTCCAAATCACCTGGTTCTACATCAAGATTGGGCAAAATTGGACCATCGTCCAATTGGAACTG
AACTTACTAGGCTCGCACTTCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGCATGTTTTATTTCATCGCTTAGGGTTTAGGATCTTCTTGGTAGGGGCTGAATGGAACCTAATCATGAGCCTGGTGGGGGAAGGTACTTCAAAGTCGGCAATGAA
GTTACGACAACCTCCAATACCGGTCCAAAAGTCCCACCGACGACAAGTGGTCAATCTCAGTCCTGCCCACTACTCCTTTTCCAACGAAACGATGGGATGCAGTAAGGGGA
AAGAAAAGCAACTATTCGAAATTTTCAACACTGCAGATTCGAGGGGCGATTCACAGACTGTTGCAGATGTTTCCTTGAAGTCGAATCTGCCTAAGAAGGCGAAAGGGGAT
GGGTCTGATCCGTTGGCGAGTCAATGGTCGTCGGATTATTCCTTGCCTGCGACTGGCGTTGGTGATAACGAGAAGAAGCAAAACCCCACAAGCGTTATTATTGCTACTGA
AGGATGGGCCAATATTGTTATCTCTGATAACATAAAGTGTCCAAAGATGGAAGAGGAGTATGATAAGGAGGCGGGGACTGCTGGACAACCCGCCTTGATCCATGAAGATT
ATCTATTGGAATGTTCGTGGGTTGGAGAGCCCATGGACATTTCGAAAAGTGATCTTAATGAGATTCTTTGGGACAATGACAAGTCAGAAGGTCCTACGCGGGACCATCGC
CTGATGATGGATTTTAGGGAGGTCTTGGATGACTGCAATCTCATGGATTTGGGCTTTTTAGGCAGCACTTATACTTGGTGCAATAGGAGAGAAGATGGTGATCAAGTGAG
CTTACGCCTAGATCGTTTTATTGGAAACTCTAATTTCGGTTCTCTGTTTCCAAATCACCTGGTTCTACATCAAGATTGGGCAAAATTGGACCATCGTCCAATTGGAACTG
AACTTACTAGGCTCGCACTTCAGTAG
Protein sequenceShow/hide protein sequence
MMHVLFHRLGFRIFLVGAEWNLIMSLVGEGTSKSAMKLRQPPIPVQKSHRRQVVNLSPAHYSFSNETMGCSKGKEKQLFEIFNTADSRGDSQTVADVSLKSNLPKKAKGD
GSDPLASQWSSDYSLPATGVGDNEKKQNPTSVIIATEGWANIVISDNIKCPKMEEEYDKEAGTAGQPALIHEDYLLECSWVGEPMDISKSDLNEILWDNDKSEGPTRDHR
LMMDFREVLDDCNLMDLGFLGSTYTWCNRREDGDQVSLRLDRFIGNSNFGSLFPNHLVLHQDWAKLDHRPIGTELTRLALQ