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Lag0042118 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042118
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionATP-dependent Clp protease ATP-binding subunit ClpX
Genome locationchr13:36832894..36843484
RNA-Seq ExpressionLag0042118
SyntenyLag0042118
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0006508 - proteolysis (biological process)
GO:0005524 - ATP binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR003959 - ATPase, AAA-type, core
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032437.1 CLP protease regulatory subunit CLPX2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2996.05Show/hide
Query:  GQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLL
        GQ SLGI+LENDDNEIV+LEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLL
Subjt:  GQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLL

XP_022997640.1 CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 [Cucurbita maxima]2.5e-2981.91Show/hide
Query:  GQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL
        GQ SLGI+LENDDNEIV+LEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLL       E  +EA + G+
Subjt:  GQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL

XP_023530366.1 CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]2.5e-2981.91Show/hide
Query:  GQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL
        GQ SLGI+LENDDNEIV+LEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLL       E  +EA + G+
Subjt:  GQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL

XP_038876517.1 CLP protease regulatory subunit CLPX2, mitochondrial isoform X1 [Benincasa hispida]8.7e-3082.11Show/hide
Query:  SGQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL
        SGQ SLGI+LENDDNEIV+LEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLL       E  +EA + G+
Subjt:  SGQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL

XP_038876518.1 CLP protease regulatory subunit CLPX2, mitochondrial isoform X2 [Benincasa hispida]8.7e-3082.11Show/hide
Query:  SGQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL
        SGQ SLGI+LENDDNEIV+LEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLL       E  +EA + G+
Subjt:  SGQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL

TrEMBL top hitse value%identityAlignment
A0A6J1DNK3 CLP protease regulatory subunit CLPX2, mitochondrial isoform X17.9e-2968.38Show/hide
Query:  SGQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGLA--AQ
        SGQ SL I+L+NDDNEIV+LEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLL+       E  +EA + G+    +
Subjt:  SGQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGLA--AQ

Query:  GKEIAAIHYSMNNFSDM
          +I   + SMN   D+
Subjt:  GKEIAAIHYSMNNFSDM

A0A6J1F3X7 CLP protease regulatory subunit CLPX2, mitochondrial isoform X21.2e-2981.91Show/hide
Query:  GQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL
        GQ SLGI+LENDDNEIV+LEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLL       E  +EA + G+
Subjt:  GQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL

A0A6J1K806 CLP protease regulatory subunit CLPX2, mitochondrial isoform X17.9e-2981.72Show/hide
Query:  QRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL
        Q SLGI+LENDDNEIV+LEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLL       E  +EA + G+
Subjt:  QRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL

A0A6J1KAD3 CLP protease regulatory subunit CLPX2, mitochondrial isoform X21.2e-2981.91Show/hide
Query:  GQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL
        GQ SLGI+LENDDNEIV+LEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLL       E  +EA + G+
Subjt:  GQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL

A0A6J1KEJ2 CLP protease regulatory subunit CLPX2, mitochondrial isoform X37.9e-2981.72Show/hide
Query:  QRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL
        Q SLGI+LENDDNEIV+LEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLL       E  +EA + G+
Subjt:  QRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL

SwissProt top hitse value%identityAlignment
A5N2K7 ATP-dependent Clp protease ATP-binding subunit ClpX6.5e-2071.01Show/hide
Query:  IQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLL
        I   N+ N+ V+L+KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGEDVE+IL KL+
Subjt:  IQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLL

B9E684 ATP-dependent Clp protease ATP-binding subunit ClpX6.5e-2071.01Show/hide
Query:  IQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLL
        I   N+ N+ V+L+KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGEDVE+IL KL+
Subjt:  IQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLL

F4K7F6 CLP protease regulatory subunit CLPX2, mitochondrial2.2e-2374.67Show/hide
Query:  SGQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKL
        S   S  I +E+D+ + V+L+KSNVLL+GPTGSGKTLLAKTLAR+VNVPF IADAT+LTQA YVGEDVESILYKL
Subjt:  SGQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKL

Q66GN9 CLP protease regulatory subunit CLPX3, mitochondrial2.4e-2269.88Show/hide
Query:  DDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL
        DD++ V+L+KSNVLLMGPTGSGKTLLAKTLAR+VNVPF IADAT LTQAGYVG+DVESIL+KLL     T  E  ++A + G+
Subjt:  DDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL

Q9FK07 CLP protease regulatory subunit CLPX1, mitochondrial6.3e-2387.3Show/hide
Query:  DNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLL
        D+++V+LEKSN+LLMGPTGSGKTLLAKTLAR VNVPF IADAT LTQAGYVGEDVESILYKLL
Subjt:  DNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLL

Arabidopsis top hitse value%identityAlignment
AT1G33360.1 ATP-dependent Clp protease1.7e-2369.88Show/hide
Query:  DDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL
        DD++ V+L+KSNVLLMGPTGSGKTLLAKTLAR+VNVPF IADAT LTQAGYVG+DVESIL+KLL     T  E  ++A + G+
Subjt:  DDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEAGL

AT1G67020.1 unknown protein4.3e-1142.86Show/hide
Query:  LRKLEIPVFSGANPYEWLHQVKRYFEVNRLTDSEKVGAVVLCLDAVALKWYYYEQKRKPIGCW
        +R++E+PVF G+  YEW  +V+R+F V R  DS+K+  V L L+ VALKW+  E        W
Subjt:  LRKLEIPVFSGANPYEWLHQVKRYFEVNRLTDSEKVGAVVLCLDAVALKWYYYEQKRKPIGCW

AT5G49840.1 ATP-dependent Clp protease1.5e-2474.67Show/hide
Query:  SGQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKL
        S   S  I +E+D+ + V+L+KSNVLL+GPTGSGKTLLAKTLAR+VNVPF IADAT+LTQA YVGEDVESILYKL
Subjt:  SGQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKL

AT5G53350.1 CLP protease regulatory subunit X4.5e-2487.3Show/hide
Query:  DNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLL
        D+++V+LEKSN+LLMGPTGSGKTLLAKTLAR VNVPF IADAT LTQAGYVGEDVESILYKLL
Subjt:  DNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATGATTGTGCTCTGCTTTGACTTGGTGTCTACATTTGCATTTAGATCAGGGCAAAGATCGCTGGGTATTCAATTGGAGAACGATGATAACGAAATTGTGGATCT
GGAAAAGAGTAATGTGTTGCTAATGGGTCCTACCGGCTCAGGGAAGACATTACTTGCAAAAACCCTTGCCCGTGTTGTGAACGTGCCATTCACTATTGCTGATGCTACTG
CATTAACTCAGGCAGGTTATGTTGGAGAAGATGTGGAATCCATATTGTACAAGCTCCTTCTGTTGATGATGTCTACTCGTATGGAATCGCGAATGGAAGCCTTGGAGGCC
GGTCTCGCTGCGCAGGGCAAAGAGATTGCGGCAATTCATTACTCGATGAACAACTTTTCTGACATGGGTTTACAGATGAAAGAAAGTTTTTCCACAATGGCTGCGCACTT
CGAAAGTATGAAAGCTGAGAAGGTTGCTTCGGTTAGGGACCAACCCCGCAAATCCGATGAAGCGGCAAGTGCCGCGAATCTCGTGGAGATCGACGCCATCGACCTGCAAA
CCTTGACCAAAGCATTGGCACCCGTCTTCGACTTACGCCTGAGGAAGTTGGAAATTCCGGTATTTTCCGGTGCAAACCCGTATGAATGGCTTCATCAAGTCAAACGTTAC
TTTGAAGTAAATCGTTTGACAGATTCAGAGAAAGTTGGTGCAGTGGTGTTATGCCTCGATGCAGTAGCCTTGAAGTGGTATTACTATGAACAGAAACGCAAGCCAATTGG
ATGCTGGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAATGATTGTGCTCTGCTTTGACTTGGTGTCTACATTTGCATTTAGATCAGGGCAAAGATCGCTGGGTATTCAATTGGAGAACGATGATAACGAAATTGTGGATCT
GGAAAAGAGTAATGTGTTGCTAATGGGTCCTACCGGCTCAGGGAAGACATTACTTGCAAAAACCCTTGCCCGTGTTGTGAACGTGCCATTCACTATTGCTGATGCTACTG
CATTAACTCAGGCAGGTTATGTTGGAGAAGATGTGGAATCCATATTGTACAAGCTCCTTCTGTTGATGATGTCTACTCGTATGGAATCGCGAATGGAAGCCTTGGAGGCC
GGTCTCGCTGCGCAGGGCAAAGAGATTGCGGCAATTCATTACTCGATGAACAACTTTTCTGACATGGGTTTACAGATGAAAGAAAGTTTTTCCACAATGGCTGCGCACTT
CGAAAGTATGAAAGCTGAGAAGGTTGCTTCGGTTAGGGACCAACCCCGCAAATCCGATGAAGCGGCAAGTGCCGCGAATCTCGTGGAGATCGACGCCATCGACCTGCAAA
CCTTGACCAAAGCATTGGCACCCGTCTTCGACTTACGCCTGAGGAAGTTGGAAATTCCGGTATTTTCCGGTGCAAACCCGTATGAATGGCTTCATCAAGTCAAACGTTAC
TTTGAAGTAAATCGTTTGACAGATTCAGAGAAAGTTGGTGCAGTGGTGTTATGCCTCGATGCAGTAGCCTTGAAGTGGTATTACTATGAACAGAAACGCAAGCCAATTGG
ATGCTGGGAGTAG
Protein sequenceShow/hide protein sequence
MLMIVLCFDLVSTFAFRSGQRSLGIQLENDDNEIVDLEKSNVLLMGPTGSGKTLLAKTLARVVNVPFTIADATALTQAGYVGEDVESILYKLLLLMMSTRMESRMEALEA
GLAAQGKEIAAIHYSMNNFSDMGLQMKESFSTMAAHFESMKAEKVASVRDQPRKSDEAASAANLVEIDAIDLQTLTKALAPVFDLRLRKLEIPVFSGANPYEWLHQVKRY
FEVNRLTDSEKVGAVVLCLDAVALKWYYYEQKRKPIGCWE