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Lag0042133 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042133
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr13:36993193..36993696
RNA-Seq ExpressionLag0042133
SyntenyLag0042133
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ10155.1 hypothetical protein Acr_21g0007540 [Actinidia rufa]2.8e-1164.58Show/hide
Query:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFV
        ++KTDP +R+RNKYC FHRDHGH T NC QLR++I  LIKEGYL++++
Subjt:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFV

MQL69050.1 hypothetical protein [Colocasia esculenta]2.5e-1258.73Show/hide
Query:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVKGEESKKPRPIKGQW
        R+++DP RRD+NKYC FHRDHGH T  C QL+DEIE LIK GYL +FV+  E    RP + +W
Subjt:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVKGEESKKPRPIKGQW

MQL93545.1 hypothetical protein [Colocasia esculenta]2.8e-1161.4Show/hide
Query:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVKGEESKKPR
        R+++DP RRD+NKYC FHRDHGH T  C QL+DEIE LIK GYL  FV+  E +  R
Subjt:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVKGEESKKPR

MQM13883.1 hypothetical protein [Colocasia esculenta]2.8e-1161.4Show/hide
Query:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVKGEESKKPR
        R+++DP RRD+NKYC FHRDHGH T  C QL+DEIE LIK GYL  FV+  E +  R
Subjt:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVKGEESKKPR

MQM14562.1 hypothetical protein [Colocasia esculenta]3.7e-1161.4Show/hide
Query:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVKGEESKKPR
        R+++DP +RD+NKYC FHRDHGH T  C QL+DEIE LIK GYL+ FV+  E ++PR
Subjt:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVKGEESKKPR

TrEMBL top hitse value%identityAlignment
A0A7J0DIY9 Uncharacterized protein4.0e-1164.58Show/hide
Query:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFV
        ++KTDP RR+RNKYC FHRDHGH T NC QL+++I  LIK GYL+++V
Subjt:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFV

A0A7J0E2N6 Uncharacterized protein5.2e-1155.17Show/hide
Query:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVKGEESKKPRP
        ++KTDP RR+RNKYC FH+DHGH T NC QL+++I  LIK GYL+++V    + +P+P
Subjt:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVKGEESKKPRP

A0A7J0FPS9 Uncharacterized protein4.0e-1150Show/hide
Query:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVKGEESKKPRPIKGQWI
        ++KTDP +R+RNKYC FHRDHGH T +C QL+++I  LIK GYL++++   +  +P P KG  +
Subjt:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVKGEESKKPRPIKGQWI

A0A7J0GHA7 Uncharacterized protein1.4e-1164.58Show/hide
Query:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFV
        ++KTDP +R+RNKYC FHRDHGH T NC QLR++I  LIKEGYL++++
Subjt:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFV

A0A7J0GHF0 Uncharacterized protein5.2e-1162.5Show/hide
Query:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFV
        ++KTDP +R+RNKYC FHRDHGH T NC QLR++I  LIK GYL++++
Subjt:  RLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCCAAGCGAGCGGAAAGGGAAGCGCAGAGGGTAACCACTATTGATAAGGGCAGAAGAAAAGAGGAAAGGGGCAAGAGGCCGCGGGAAGAGGATGGAGATCGGAA
CCACCATAGATACTCCTCTGGTCGAAGTCGGTTTGATCAGAGGGAGGGCCGAGGCCGACCAGAACTCAGAGATAGGCTGAAAACGGATCCCAGTAGGAGGGATAGGAACA
AATATTGCGTGTTTCATCGGGATCATGGGCATACAACGCGCAATTGCATACAGCTTCGAGACGAGATAGAGAGCCTGATCAAGGAGGGATATCTGAAAGAGTTTGTCAAG
GGTGAGGAGAGCAAAAAGCCGAGGCCGATTAAAGGACAATGGATCCTCTACACCATCATCAGACATGATGGTTTGAGTTTCTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCCAAGCGAGCGGAAAGGGAAGCGCAGAGGGTAACCACTATTGATAAGGGCAGAAGAAAAGAGGAAAGGGGCAAGAGGCCGCGGGAAGAGGATGGAGATCGGAA
CCACCATAGATACTCCTCTGGTCGAAGTCGGTTTGATCAGAGGGAGGGCCGAGGCCGACCAGAACTCAGAGATAGGCTGAAAACGGATCCCAGTAGGAGGGATAGGAACA
AATATTGCGTGTTTCATCGGGATCATGGGCATACAACGCGCAATTGCATACAGCTTCGAGACGAGATAGAGAGCCTGATCAAGGAGGGATATCTGAAAGAGTTTGTCAAG
GGTGAGGAGAGCAAAAAGCCGAGGCCGATTAAAGGACAATGGATCCTCTACACCATCATCAGACATGATGGTTTGAGTTTCTGTTAA
Protein sequenceShow/hide protein sequence
MKSKRAEREAQRVTTIDKGRRKEERGKRPREEDGDRNHHRYSSGRSRFDQREGRGRPELRDRLKTDPSRRDRNKYCVFHRDHGHTTRNCIQLRDEIESLIKEGYLKEFVK
GEESKKPRPIKGQWILYTIIRHDGLSFC