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Lag0042144 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042144
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiontranscription initiation factor TFIID subunit 5
Genome locationchr13:37259634..37260657
RNA-Seq ExpressionLag0042144
SyntenyLag0042144
Gene Ontology termsGO:0006367 - transcription initiation from RNA polymerase II promoter (biological process)
GO:0006413 - translational initiation (biological process)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064589.1 transcription initiation factor TFIID subunit 5 [Cucumis melo var. makuwa]9.2e-2767.57Show/hide
Query:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG
        ++I Q     +L  L  T   ++ G++    + +   +VFPGQPSSISDDAELVTLTG+TQDTA+QIN+KEV WGLLEDSLEERLEKAAGLLSDSEKAEG
Subjt:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG

Query:  ETKDGDVDENK
        ETKDGDVDENK
Subjt:  ETKDGDVDENK
TYK20000.1 transcription initiation factor TFIID subunit 5 [Cucumis melo var. makuwa]9.2e-2767.57Show/hide
Query:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG
        ++I Q     +L  L  T   ++ G++    + +   +VFPGQPSSISDDAELVTLTG+TQDTA+QIN+KEV WGLLEDSLEERLEKAAGLLSDSEKAEG
Subjt:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG

Query:  ETKDGDVDENK
        ETKDGDVDENK
Subjt:  ETKDGDVDENK
XP_004145505.1 transcription initiation factor TFIID subunit 5 isoform X1 [Cucumis sativus]9.2e-2767.57Show/hide
Query:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG
        ++I Q     +L  L  T   ++ G++    + +   +VFPGQPSSISDDAELVTLTG+TQDTA+QIN+KEV WGLLEDSLEERLEKAAGLLSDSEKAEG
Subjt:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG

Query:  ETKDGDVDENK
        ETKDGDVDENK
Subjt:  ETKDGDVDENK
XP_022133497.1 transcription initiation factor TFIID subunit 5 [Momordica charantia]2.4e-2767.57Show/hide
Query:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG
        ++I Q     +L  L  T   ++ G++    + +   +VFPGQPSSISDDAE+VTLTG TQDTA+QINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG
Subjt:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG

Query:  ETKDGDVDENK
        ETKDGD+DENK
Subjt:  ETKDGDVDENK
XP_031740017.1 transcription initiation factor TFIID subunit 5 isoform X2 [Cucumis sativus]9.2e-2767.57Show/hide
Query:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG
        ++I Q     +L  L  T   ++ G++    + +   +VFPGQPSSISDDAELVTLTG+TQDTA+QIN+KEV WGLLEDSLEERLEKAAGLLSDSEKAEG
Subjt:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG

Query:  ETKDGDVDENK
        ETKDGDVDENK
Subjt:  ETKDGDVDENK
TrEMBL top hitse value%identityAlignment
A0A0A0L139 Uncharacterized protein4.4e-2767.57Show/hide
Query:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG
        ++I Q     +L  L  T   ++ G++    + +   +VFPGQPSSISDDAELVTLTG+TQDTA+QIN+KEV WGLLEDSLEERLEKAAGLLSDSEKAEG
Subjt:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG

Query:  ETKDGDVDENK
        ETKDGDVDENK
Subjt:  ETKDGDVDENK
A0A1S3BVN5 transcription initiation factor TFIID subunit 54.4e-2767.57Show/hide
Query:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG
        ++I Q     +L  L  T   ++ G++    + +   +VFPGQPSSISDDAELVTLTG+TQDTA+QIN+KEV WGLLEDSLEERLEKAAGLLSDSEKAEG
Subjt:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG

Query:  ETKDGDVDENK
        ETKDGDVDENK
Subjt:  ETKDGDVDENK
A0A5A7VGF1 Transcription initiation factor TFIID subunit 54.4e-2767.57Show/hide
Query:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG
        ++I Q     +L  L  T   ++ G++    + +   +VFPGQPSSISDDAELVTLTG+TQDTA+QIN+KEV WGLLEDSLEERLEKAAGLLSDSEKAEG
Subjt:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG

Query:  ETKDGDVDENK
        ETKDGDVDENK
Subjt:  ETKDGDVDENK
A0A5D3D945 Transcription initiation factor TFIID subunit 54.4e-2767.57Show/hide
Query:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG
        ++I Q     +L  L  T   ++ G++    + +   +VFPGQPSSISDDAELVTLTG+TQDTA+QIN+KEV WGLLEDSLEERLEKAAGLLSDSEKAEG
Subjt:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG

Query:  ETKDGDVDENK
        ETKDGDVDENK
Subjt:  ETKDGDVDENK
A0A6J1BWV4 transcription initiation factor TFIID subunit 51.2e-2767.57Show/hide
Query:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG
        ++I Q     +L  L  T   ++ G++    + +   +VFPGQPSSISDDAE+VTLTG TQDTA+QINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG
Subjt:  MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEG

Query:  ETKDGDVDENK
        ETKDGD+DENK
Subjt:  ETKDGDVDENK
SwissProt top hitse value%identityAlignment
Q6S7B0 Transcription initiation factor TFIID subunit 52.4e-2268.92Show/hide
Query:  RVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEGETKDGDVDENK
        +V+ GQP+S SDD E VT+ G+ QDTA+ INQKE+QWGLLEDSLE+RLEK  GLLSDSEK +GE+KDGD D++K
Subjt:  RVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEGETKDGDVDENK
Arabidopsis top hitse value%identityAlignment
AT5G25150.1 TBP-associated factor 51.7e-2368.92Show/hide
Query:  RVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEGETKDGDVDENK
        +V+ GQP+S SDD E VT+ G+ QDTA+ INQKE+QWGLLEDSLE+RLEK  GLLSDSEK +GE+KDGD D++K
Subjt:  RVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEGETKDGDVDENK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCTTACAAGCGCTCGATGCTCAAGTTCTCATTGGTTTAGCAGCGACCCTGCTAGCCATTGTTGCTGGTGTTGTTGTCCTCTTTTCCTCCAGAAAATCCGCCTC
TCGAGTTTTCCCTGGTCAGCCTAGCTCAATATCTGATGATGCTGAACTTGTGACACTCACGGGAAACACCCAGGACACTGCAAGTCAGATAAATCAAAAAGAAGTCCAAT
GGGGTTTACTTGAAGATTCTTTAGAAGAACGCTTGGAGAAAGCCGCTGGTTTGCTCTCAGATTCTGAAAAGGCTGAGGGAGAAACGAAGGATGGTGATGTAGATGAGAAT
AAGGTACCTGTGCTGATCCAGTGCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCTTACAAGCGCTCGATGCTCAAGTTCTCATTGGTTTAGCAGCGACCCTGCTAGCCATTGTTGCTGGTGTTGTTGTCCTCTTTTCCTCCAGAAAATCCGCCTC
TCGAGTTTTCCCTGGTCAGCCTAGCTCAATATCTGATGATGCTGAACTTGTGACACTCACGGGAAACACCCAGGACACTGCAAGTCAGATAAATCAAAAAGAAGTCCAAT
GGGGTTTACTTGAAGATTCTTTAGAAGAACGCTTGGAGAAAGCCGCTGGTTTGCTCTCAGATTCTGAAAAGGCTGAGGGAGAAACGAAGGATGGTGATGTAGATGAGAAT
AAGGTACCTGTGCTGATCCAGTGCTTCTGA
Protein sequenceShow/hide protein sequence
MEILQALDAQVLIGLAATLLAIVAGVVVLFSSRKSASRVFPGQPSSISDDAELVTLTGNTQDTASQINQKEVQWGLLEDSLEERLEKAAGLLSDSEKAEGETKDGDVDEN
KVPVLIQCF