CuGenDBv2

Gene ID	Lag0042145
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	CCHC-type domain-containing protein
Genome location	chr13:37277954..37278825
RNA-Seq Expression	Lag0042145
Synteny	Lag0042145
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0050194.1 polyprotein [Cucumis melo var. makuwa]

2.5e-06

30.89

Show/hide

Query:  MKAFCSLYGCERIEEPAHTSKKIVRRNKSRRKINELDFDEEYSSSLSNSSSEDLNQIQFEDTDSEISSQSESDHSECIKACKKDREGHCINVLTNEQEVL
        M  FC  YG   +     + KK+V       K  EL  +EE  S  S    + LN +  E +D   SS++E+D+ E I          CINVLT+ QE L
Subjt:  MKAFCSLYGCERIEEPAHTSKKIVRRNKSRRKINELDFDEEYSSSLSNSSSEDLNQIQFEDTDSEISSQSESDHSECIKACKKDREGHCINVLTNEQEVL

Query:  FNSIDYIEDKEMKKKILKTLRQSLGSSTVQAPQMEKKEIRQLSLSEILQNKPDFMRTKSDFQPSSIQDLQFEINNLKKEIRNNKIEIDAIK
         + I+ ++D+ ++K IL  LR+ L     + P  + K+    S   ++      + +K    P  + DLQ EI  LKKEI  N+ +I  ++
Subjt:  FNSIDYIEDKEMKKKILKTLRQSLGSSTVQAPQMEKKEIRQLSLSEILQNKPDFMRTKSDFQPSSIQDLQFEINNLKKEIRNNKIEIDAIK

KAA0056776.1 Enzymatic polyprotein [Cucumis melo var. makuwa]

4.3e-06

32.04

Show/hide

Query:  DEEYSSSLSNSSSED-LNQIQFEDTDSEISSQSESDHSE------CIKACKKDREGHCINVLTNEQEVLFNSIDYIEDKEMKKKILKTLRQSLGSSTVQA
        D++ +S   +SS ED +N +Q E + SE    S+SD S+      C   C     GH INV+T +QE LF+ I+ I D+E K+  L  L+QSL     QA
Subjt:  DEEYSSSLSNSSSED-LNQIQFEDTDSEISSQSESDHSE------CIKACKKDREGHCINVLTNEQEVLFNSIDYIEDKEMKKKILKTLRQSLGSSTVQA

Query:  PQMEKKEIRQLSLSEILQNKPDFMRTKSDFQ-PSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDF
        PQ   +     S  +IL       R K + + P  ++DL  E+  LK+E+  NK  +  ++     F+   ++ +    DF
Subjt:  PQMEKKEIRQLSLSEILQNKPDFMRTKSDFQ-PSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDF

KAA0059217.1 Enzymatic polyprotein [Cucumis melo var. makuwa]

4.3e-06

32.04

Show/hide

Query:  DEEYSSSLSNSSSED-LNQIQFEDTDSEISSQSESDHSE------CIKACKKDREGHCINVLTNEQEVLFNSIDYIEDKEMKKKILKTLRQSLGSSTVQA
        D++ +S   +SS ED +N +Q E + SE    S+SD S+      C   C     GH INV+T +QE LF+ I+ I D+E K+  L  L+QSL     QA
Subjt:  DEEYSSSLSNSSSED-LNQIQFEDTDSEISSQSESDHSE------CIKACKKDREGHCINVLTNEQEVLFNSIDYIEDKEMKKKILKTLRQSLGSSTVQA

Query:  PQMEKKEIRQLSLSEILQNKPDFMRTKSDFQ-PSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDF
        PQ   +     S  +IL       R K + + P  ++DL  E+  LK+E+  NK  +  ++     F+   ++ +    DF
Subjt:  PQMEKKEIRQLSLSEILQNKPDFMRTKSDFQ-PSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDF

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]

4.3e-06

32.04

Show/hide

Query:  DEEYSSSLSNSSSED-LNQIQFEDTDSEISSQSESDHSE------CIKACKKDREGHCINVLTNEQEVLFNSIDYIEDKEMKKKILKTLRQSLGSSTVQA
        D++ +S   +SS ED +N +Q E + SE    S+SD S+      C   C     GH INV+T +QE LF+ I+ I D+E K+  L  L+QSL     QA
Subjt:  DEEYSSSLSNSSSED-LNQIQFEDTDSEISSQSESDHSE------CIKACKKDREGHCINVLTNEQEVLFNSIDYIEDKEMKKKILKTLRQSLGSSTVQA

Query:  PQMEKKEIRQLSLSEILQNKPDFMRTKSDFQ-PSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDF
        PQ   +     S  +IL       R K + + P  ++DL  E+  LK+E+  NK  +  ++     F+   ++ +    DF
Subjt:  PQMEKKEIRQLSLSEILQNKPDFMRTKSDFQ-PSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDF

TYJ98215.1 polyprotein [Cucumis melo var. makuwa]

1.1e-06

30.89

Show/hide

Query:  MKAFCSLYGCERIEEPAHTSKKIVRRNKSRRKINELDFDEEYSSSLSNSSSEDLNQIQFEDTDSEISSQSESDHSECIKACKKDREGHCINVLTNEQEVL
        M +FC  YG   +     + KK+V       K  EL  +EE  S  S    + LN +  E +D   SS++E+D+ E I          CINVLT+ QE L
Subjt:  MKAFCSLYGCERIEEPAHTSKKIVRRNKSRRKINELDFDEEYSSSLSNSSSEDLNQIQFEDTDSEISSQSESDHSECIKACKKDREGHCINVLTNEQEVL

Query:  FNSIDYIEDKEMKKKILKTLRQSLGSSTVQAPQMEKKEIRQLSLSEILQNKPDFMRTKSDFQPSSIQDLQFEINNLKKEIRNNKIEIDAIK
         + I+ ++D+ ++K IL  LR+ L     + P  + K+    S   ++      + +K    P  + DLQ EI  LKKEI  N+ +I  ++
Subjt:  FNSIDYIEDKEMKKKILKTLRQSLGSSTVQAPQMEKKEIRQLSLSEILQNKPDFMRTKSDFQPSSIQDLQFEINNLKKEIRNNKIEIDAIK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7U4M8 Polyprotein

1.2e-06

30.89

Show/hide

Query:  MKAFCSLYGCERIEEPAHTSKKIVRRNKSRRKINELDFDEEYSSSLSNSSSEDLNQIQFEDTDSEISSQSESDHSECIKACKKDREGHCINVLTNEQEVL
        M  FC  YG   +     + KK+V       K  EL  +EE  S  S    + LN +  E +D   SS++E+D+ E I          CINVLT+ QE L
Subjt:  MKAFCSLYGCERIEEPAHTSKKIVRRNKSRRKINELDFDEEYSSSLSNSSSEDLNQIQFEDTDSEISSQSESDHSECIKACKKDREGHCINVLTNEQEVL

Query:  FNSIDYIEDKEMKKKILKTLRQSLGSSTVQAPQMEKKEIRQLSLSEILQNKPDFMRTKSDFQPSSIQDLQFEINNLKKEIRNNKIEIDAIK
         + I+ ++D+ ++K IL  LR+ L     + P  + K+    S   ++      + +K    P  + DLQ EI  LKKEI  N+ +I  ++
Subjt:  FNSIDYIEDKEMKKKILKTLRQSLGSSTVQAPQMEKKEIRQLSLSEILQNKPDFMRTKSDFQPSSIQDLQFEINNLKKEIRNNKIEIDAIK

A0A5A7UR29 Enzymatic polyprotein

2.1e-06

32.04

Show/hide

Query:  DEEYSSSLSNSSSED-LNQIQFEDTDSEISSQSESDHSE------CIKACKKDREGHCINVLTNEQEVLFNSIDYIEDKEMKKKILKTLRQSLGSSTVQA
        D++ +S   +SS ED +N +Q E + SE    S+SD S+      C   C     GH INV+T +QE LF+ I+ I D+E K+  L  L+QSL     QA
Subjt:  DEEYSSSLSNSSSED-LNQIQFEDTDSEISSQSESDHSE------CIKACKKDREGHCINVLTNEQEVLFNSIDYIEDKEMKKKILKTLRQSLGSSTVQA

Query:  PQMEKKEIRQLSLSEILQNKPDFMRTKSDFQ-PSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDF
        PQ   +     S  +IL       R K + + P  ++DL  E+  LK+E+  NK  +  ++     F+   ++ +    DF
Subjt:  PQMEKKEIRQLSLSEILQNKPDFMRTKSDFQ-PSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDF

A0A5A7UX67 Enzymatic polyprotein

2.1e-06

32.04

Show/hide

Query:  DEEYSSSLSNSSSED-LNQIQFEDTDSEISSQSESDHSE------CIKACKKDREGHCINVLTNEQEVLFNSIDYIEDKEMKKKILKTLRQSLGSSTVQA
        D++ +S   +SS ED +N +Q E + SE    S+SD S+      C   C     GH INV+T +QE LF+ I+ I D+E K+  L  L+QSL     QA
Subjt:  DEEYSSSLSNSSSED-LNQIQFEDTDSEISSQSESDHSE------CIKACKKDREGHCINVLTNEQEVLFNSIDYIEDKEMKKKILKTLRQSLGSSTVQA

Query:  PQMEKKEIRQLSLSEILQNKPDFMRTKSDFQ-PSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDF
        PQ   +     S  +IL       R K + + P  ++DL  E+  LK+E+  NK  +  ++     F+   ++ +    DF
Subjt:  PQMEKKEIRQLSLSEILQNKPDFMRTKSDFQ-PSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDF

A0A5D3BEY3 Enzymatic polyprotein

2.1e-06

32.04

Show/hide

Query:  DEEYSSSLSNSSSED-LNQIQFEDTDSEISSQSESDHSE------CIKACKKDREGHCINVLTNEQEVLFNSIDYIEDKEMKKKILKTLRQSLGSSTVQA
        D++ +S   +SS ED +N +Q E + SE    S+SD S+      C   C     GH INV+T +QE LF+ I+ I D+E K+  L  L+QSL     QA
Subjt:  DEEYSSSLSNSSSED-LNQIQFEDTDSEISSQSESDHSE------CIKACKKDREGHCINVLTNEQEVLFNSIDYIEDKEMKKKILKTLRQSLGSSTVQA

Query:  PQMEKKEIRQLSLSEILQNKPDFMRTKSDFQ-PSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDF
        PQ   +     S  +IL       R K + + P  ++DL  E+  LK+E+  NK  +  ++     F+   ++ +    DF
Subjt:  PQMEKKEIRQLSLSEILQNKPDFMRTKSDFQ-PSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDF

A0A5D3BI97 Polyprotein

5.5e-07

30.89

Show/hide

Query:  MKAFCSLYGCERIEEPAHTSKKIVRRNKSRRKINELDFDEEYSSSLSNSSSEDLNQIQFEDTDSEISSQSESDHSECIKACKKDREGHCINVLTNEQEVL
        M +FC  YG   +     + KK+V       K  EL  +EE  S  S    + LN +  E +D   SS++E+D+ E I          CINVLT+ QE L
Subjt:  MKAFCSLYGCERIEEPAHTSKKIVRRNKSRRKINELDFDEEYSSSLSNSSSEDLNQIQFEDTDSEISSQSESDHSECIKACKKDREGHCINVLTNEQEVL

Query:  FNSIDYIEDKEMKKKILKTLRQSLGSSTVQAPQMEKKEIRQLSLSEILQNKPDFMRTKSDFQPSSIQDLQFEINNLKKEIRNNKIEIDAIK
         + I+ ++D+ ++K IL  LR+ L     + P  + K+    S   ++      + +K    P  + DLQ EI  LKKEI  N+ +I  ++
Subjt:  FNSIDYIEDKEMKKKILKTLRQSLGSSTVQAPQMEKKEIRQLSLSEILQNKPDFMRTKSDFQPSSIQDLQFEINNLKKEIRNNKIEIDAIK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAAGCTTTCTGTTCTCTATATGGTTGTGAGCGAATAGAAGAACCAGCTCACACATCAAAGAAAATCGTCCGAAGAAACAAAAGCCGAAGAAAGATCAATGAGCTAGA
CTTTGATGAAGAATATTCATCGAGCCTCTCAAATAGTTCGTCTGAAGATTTGAATCAAATCCAATTTGAGGATACTGATTCTGAGATCTCCAGCCAAAGCGAAAGCGATC
ATTCTGAATGCATCAAAGCATGCAAGAAAGATCGAGAAGGACATTGTATAAATGTTCTTACAAACGAACAGGAAGTTCTTTTCAACTCTATAGACTATATAGAGGATAAG
GAAATGAAAAAGAAAATTTTAAAGACGTTAAGACAGTCTTTAGGATCATCAACTGTCCAAGCGCCACAAATGGAGAAGAAAGAAATTCGGCAGCTCAGTTTGTCCGAAAT
TCTTCAAAACAAACCAGATTTTATGAGAACAAAATCAGATTTCCAACCTTCCTCTATTCAAGACTTACAATTTGAAATCAACAATCTCAAAAAGGAGATTAGAAATAATA
AAATAGAAATTGATGCAATAAAAGTAGAGATTAATAATTTTAAACTCAAAACTAGTAATTCCGATAATGAAGGAGAAGATTTCCTTCTTAATCAAGTTACATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKAFCSLYGCERIEEPAHTSKKIVRRNKSRRKINELDFDEEYSSSLSNSSSEDLNQIQFEDTDSEISSQSESDHSECIKACKKDREGHCINVLTNEQEVLFNSIDYIEDK
EMKKKILKTLRQSLGSSTVQAPQMEKKEIRQLSLSEILQNKPDFMRTKSDFQPSSIQDLQFEINNLKKEIRNNKIEIDAIKVEINNFKLKTSNSDNEGEDFLLNQVT

Lag0042145 (gene) of Sponge gourd (AG-4) v1 genome