; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0042169 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042169
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationchr13:37751512..37751915
RNA-Seq ExpressionLag0042169
SyntenyLag0042169
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW25786.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]5.9e-1643.27Show/hide
Query:  VDWNFLDKILAKKGFGYRWRSWVWSCMR-----------LVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG
        V W+FLD +L KKGF  RWR W+  C+            L RM+ R  E +++EGF+VG+    +SHLQFADD IFF + +EE    L  +L  FG + G
Subjt:  VDWNFLDKILAKKGFGYRWRSWVWSCMR-----------LVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG

Query:  LKIS
        LK++
Subjt:  LKIS

RVW32868.1 DExH-box ATP-dependent RNA helicase DExH14 [Vitis vinifera]1.0e-1543.27Show/hide
Query:  VDWNFLDKILAKKGFGYRWRSWVWSCMR-----------LVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG
        V W FLD +L  KGF  RWR W+  C+            L RM+ R  E +++EGF+VG+    +SHLQFADD IFF S +EE  + L  +L  FG + G
Subjt:  VDWNFLDKILAKKGFGYRWRSWVWSCMR-----------LVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG

Query:  LKIS
        LK++
Subjt:  LKIS

RVW36772.1 hypothetical protein CK203_101570 [Vitis vinifera]2.0e-1644Show/hide
Query:  VDWNFLDKILAKKGFGYRWRSWVWSCMRLV-------RMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYGLKIS
        V W+FLD +L  KGF  RWR W+  C+  V       RM+ +  E +++EGF+VG+    +SHLQFADD IFF S +EE  + L ++L  FG + GLK++
Subjt:  VDWNFLDKILAKKGFGYRWRSWVWSCMRLV-------RMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYGLKIS

RVW97471.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]7.7e-1643.27Show/hide
Query:  VDWNFLDKILAKKGFGYRWRSWVWSCMRLVR-----------MVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG
        V W+FLD +L KKGF  RWR W+  C+ +V            M+ R  E + +EGF+V +    +SHLQFADD IFF S +EE    L  +L  FGR++G
Subjt:  VDWNFLDKILAKKGFGYRWRSWVWSCMRLVR-----------MVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG

Query:  LKIS
        LK++
Subjt:  LKIS

RVX02463.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]5.9e-1644.23Show/hide
Query:  VDWNFLDKILAKKGFGYRWRSWVWSCMR-----------LVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG
        V W+FLD +L KKGF  RWR W+  C+            L RM+ R  E +++EGF+VG+    +SHLQFADDIIFF + +EE    L  +L  FG + G
Subjt:  VDWNFLDKILAKKGFGYRWRSWVWSCMR-----------LVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG

Query:  LKIS
        LK++
Subjt:  LKIS

TrEMBL top hitse value%identityAlignment
A0A438CRE7 Transposon TX1 uncharacterized 149 kDa protein2.9e-1643.27Show/hide
Query:  VDWNFLDKILAKKGFGYRWRSWVWSCMR-----------LVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG
        V W+FLD +L KKGF  RWR W+  C+            L RM+ R  E +++EGF+VG+    +SHLQFADD IFF + +EE    L  +L  FG + G
Subjt:  VDWNFLDKILAKKGFGYRWRSWVWSCMR-----------LVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG

Query:  LKIS
        LK++
Subjt:  LKIS

A0A438DBQ9 DExH-box ATP-dependent RNA helicase DExH144.9e-1643.27Show/hide
Query:  VDWNFLDKILAKKGFGYRWRSWVWSCMR-----------LVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG
        V W FLD +L  KGF  RWR W+  C+            L RM+ R  E +++EGF+VG+    +SHLQFADD IFF S +EE  + L  +L  FG + G
Subjt:  VDWNFLDKILAKKGFGYRWRSWVWSCMR-----------LVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG

Query:  LKIS
        LK++
Subjt:  LKIS

A0A438DMU5 Uncharacterized protein9.9e-1744Show/hide
Query:  VDWNFLDKILAKKGFGYRWRSWVWSCMRLV-------RMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYGLKIS
        V W+FLD +L  KGF  RWR W+  C+  V       RM+ +  E +++EGF+VG+    +SHLQFADD IFF S +EE  + L ++L  FG + GLK++
Subjt:  VDWNFLDKILAKKGFGYRWRSWVWSCMRLV-------RMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYGLKIS

A0A438ILA1 Transposon TX1 uncharacterized 149 kDa protein3.8e-1643.27Show/hide
Query:  VDWNFLDKILAKKGFGYRWRSWVWSCMRLVR-----------MVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG
        V W+FLD +L KKGF  RWR W+  C+ +V            M+ R  E + +EGF+V +    +SHLQFADD IFF S +EE    L  +L  FGR++G
Subjt:  VDWNFLDKILAKKGFGYRWRSWVWSCMRLVR-----------MVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG

Query:  LKIS
        LK++
Subjt:  LKIS

A0A438J0I2 Transposon TX1 uncharacterized 149 kDa protein2.9e-1644.23Show/hide
Query:  VDWNFLDKILAKKGFGYRWRSWVWSCMR-----------LVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG
        V W+FLD +L KKGF  RWR W+  C+            L RM+ R  E +++EGF+VG+    +SHLQFADDIIFF + +EE    L  +L  FG + G
Subjt:  VDWNFLDKILAKKGFGYRWRSWVWSCMR-----------LVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYG

Query:  LKIS
        LK++
Subjt:  LKIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTGGATTGGAACTTTCTGGATAAGATCTTGGCTAAGAAGGGTTTTGGTTATCGATGGAGATCATGGGTCTGGAGTTGTATGCGATTAGTTAGAATGGTCTCCAG
AGGGGTGGAGGGAGATATCATTGAGGGTTTTAAGGTGGGTAAGGAGTGCGTTTCTTTATCTCACCTTCAGTTTGCTGATGATATTATCTTCTTCTGCTCGGGGAAGGAGG
AAGCCTTTCTTATCTTAAATCATATGCTCGCCTTCTTTGGGAGGATGTATGGGCTTAAGATTAGTAGAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTGGATTGGAACTTTCTGGATAAGATCTTGGCTAAGAAGGGTTTTGGTTATCGATGGAGATCATGGGTCTGGAGTTGTATGCGATTAGTTAGAATGGTCTCCAG
AGGGGTGGAGGGAGATATCATTGAGGGTTTTAAGGTGGGTAAGGAGTGCGTTTCTTTATCTCACCTTCAGTTTGCTGATGATATTATCTTCTTCTGCTCGGGGAAGGAGG
AAGCCTTTCTTATCTTAAATCATATGCTCGCCTTCTTTGGGAGGATGTATGGGCTTAAGATTAGTAGAAGTTAA
Protein sequenceShow/hide protein sequence
MIVDWNFLDKILAKKGFGYRWRSWVWSCMRLVRMVSRGVEGDIIEGFKVGKECVSLSHLQFADDIIFFCSGKEEAFLILNHMLAFFGRMYGLKISRS