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Lag0042178 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042178
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein SHOOT GRAVITROPISM 6
Genome locationchr13:37970534..37971254
RNA-Seq ExpressionLag0042178
SyntenyLag0042178
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CDP15300.1 unnamed protein product [Coffea canephora]1.0e-0476.32Show/hide
Query:  KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEI
        +LGLAK MGLVA SHLDT+LEKLKDIL NV  SFF  I
Subjt:  KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEI

KAG8374197.1 hypothetical protein BUALT_Bualt11G0106000 [Buddleja alternifolia]2.6e-0553.12Show/hide
Query:  KIEDRNDPKSLKDLAGLK-DLKENLIKLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEI
        K+ DR   ++  DL  ++ D+   + ++GLAK MGLVA SHLDT+LEKLKDIL NV HS F  I
Subjt:  KIEDRNDPKSLKDLAGLK-DLKENLIKLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEI

TYK07351.1 protein SHOOT GRAVITROPISM 6 [Cucumis melo var. makuwa]7.7e-0552.31Show/hide
Query:  IKIEDRNDPKSLKDLAGLKDLKENLI----KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFF
        I ++  ND   + D   L   + N+     +LGLAK MGLVA+SHLDT+LEKLKDIL N+ HSFF
Subjt:  IKIEDRNDPKSLKDLAGLKDLKENLI----KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFF

XP_008462510.1 PREDICTED: protein SHOOT GRAVITROPISM 6 [Cucumis melo]7.7e-0552.31Show/hide
Query:  IKIEDRNDPKSLKDLAGLKDLKENLI----KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFF
        I ++  ND   + D   L   + N+     +LGLAK MGLVA+SHLDT+LEKLKDIL N+ HSFF
Subjt:  IKIEDRNDPKSLKDLAGLKDLKENLI----KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFF

XP_022143882.1 protein SHOOT GRAVITROPISM 6 [Momordica charantia]7.7e-0543.48Show/hide
Query:  MVFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGLK------DLKENLIKLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFP
        M  HC+LV SS EMFVE+LV   AIKIEDR+DP S K+LAGL         K   +K+G    + L A S    +L  L   +  +EH  +P
Subjt:  MVFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGLK------DLKENLIKLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFP

TrEMBL top hitse value%identityAlignment
A0A068V3E4 Uncharacterized protein4.9e-0576.32Show/hide
Query:  KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEI
        +LGLAK MGLVA SHLDT+LEKLKDIL NV  SFF  I
Subjt:  KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEI

A0A1S3CH33 protein SHOOT GRAVITROPISM 63.7e-0552.31Show/hide
Query:  IKIEDRNDPKSLKDLAGLKDLKENLI----KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFF
        I ++  ND   + D   L   + N+     +LGLAK MGLVA+SHLDT+LEKLKDIL N+ HSFF
Subjt:  IKIEDRNDPKSLKDLAGLKDLKENLI----KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFF

A0A5D3C634 Protein SHOOT GRAVITROPISM 63.7e-0552.31Show/hide
Query:  IKIEDRNDPKSLKDLAGLKDLKENLI----KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFF
        I ++  ND   + D   L   + N+     +LGLAK MGLVA+SHLDT+LEKLKDIL N+ HSFF
Subjt:  IKIEDRNDPKSLKDLAGLKDLKENLI----KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFF

A0A6J1CS52 protein SHOOT GRAVITROPISM 63.7e-0543.48Show/hide
Query:  MVFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGLK------DLKENLIKLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFP
        M  HC+LV SS EMFVE+LV   AIKIEDR+DP S K+LAGL         K   +K+G    + L A S    +L  L   +  +EH  +P
Subjt:  MVFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGLK------DLKENLIKLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFP

A0A6P6SYP0 protein SHOOT GRAVITROPISM 6 isoform X34.9e-0576.32Show/hide
Query:  KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEI
        +LGLAK MGLVA SHLDT+LEKLKDIL NV  SFF  I
Subjt:  KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEI

SwissProt top hitse value%identityAlignment
F4IP13 Protein SHOOT GRAVITROPISM 61.6e-0568.42Show/hide
Query:  KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEI
        +LGLAK MGLVA SHLDT+LEKLK I+ NV  S F  I
Subjt:  KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEI

Arabidopsis top hitse value%identityAlignment
AT2G36810.1 ARM repeat superfamily protein1.1e-0668.42Show/hide
Query:  KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEI
        +LGLAK MGLVA SHLDT+LEKLK I+ NV  S F  I
Subjt:  KLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTCCATTGCTTCCTGGTTGTTTCATCTAAAGAAATGTTTGTTGAGTTTCTTGTGAGTCTCACTGCCATCAAAATTGAAGACAGAAATGATCCTAAAAGTTTAAA
GGACTTAGCTGGGTTGAAAGACTTGAAAGAGAACTTGATAAAGCTTGGTTTGGCAAAAGAAATGGGATTGGTTGCAACATCCCATTTGGATACGATATTGGAAAAGCTGA
AAGACATTCTAGTTAATGTGGAGCATAGTTTTTTTCCTGAGATTCCTGTTCTGCTGCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTCCATTGCTTCCTGGTTGTTTCATCTAAAGAAATGTTTGTTGAGTTTCTTGTGAGTCTCACTGCCATCAAAATTGAAGACAGAAATGATCCTAAAAGTTTAAA
GGACTTAGCTGGGTTGAAAGACTTGAAAGAGAACTTGATAAAGCTTGGTTTGGCAAAAGAAATGGGATTGGTTGCAACATCCCATTTGGATACGATATTGGAAAAGCTGA
AAGACATTCTAGTTAATGTGGAGCATAGTTTTTTTCCTGAGATTCCTGTTCTGCTGCTCTGA
Protein sequenceShow/hide protein sequence
MVFHCFLVVSSKEMFVEFLVSLTAIKIEDRNDPKSLKDLAGLKDLKENLIKLGLAKEMGLVATSHLDTILEKLKDILVNVEHSFFPEIPVLLL