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Lag0042186 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042186
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L9-like
Genome locationchr13:38254614..38255198
RNA-Seq ExpressionLag0042186
SyntenyLag0042186
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000702 - Ribosomal protein L6
IPR036789 - Ribosomal protein L6, alpha-beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5255351.1 60S ribosomal protein [Salix suchowensis]1.3e-3055.19Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII--------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYAHFPINASITNDNKSMEICNFL
        MK ILSS+ MDI +GVKIK+ A++I                    ++TS AI   LSHVENLITGVTKGYRYKMRFVYAHFPINASITN N ++EI NFL
Subjt:  MKMILSSKAMDILEGVKIKVIAKII--------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYAHFPINASITNDNKSMEICNFL

Query:  GEKK----------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        GEKK                      KCH KNKDI KFLDGIYV+ KG V+ EE
Subjt:  GEKK----------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

XP_015878732.1 60S ribosomal protein L9 isoform X1 [Ziziphus jujuba]1.2e-2846.91Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI EGVKIKV AKII                                         ++TS AI   LSHVENLITGVTKGYRYKMRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASITN NKS+EI NFLGEKK                                         KCH KNKDI KFLDGIYV+ KG ++EEE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

XP_022159699.1 60S ribosomal protein L9-like [Momordica charantia]1.2e-2847.42Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI EGVKIKV AKII                                         ++TS AI   LSHVENLITGVTKGYRYKMRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASITN NKS+EI NFLGEKK                                         KCH KNKDI KFLDGIYV+ KG V+EEE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

XP_022973063.1 60S ribosomal protein L9-like [Cucurbita maxima]9.2e-2947.42Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI EGVKIKV AKII                                         ++TS AI   LSHVENLITGVTKGYRYKMRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASITN NKS+EI NFLGEKK                                         KCH KNKDI KFLDGIYV+ KG V+EEE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

XP_023551562.1 60S ribosomal protein L9-like [Cucurbita pepo subsp. pepo]9.2e-2947.42Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI EGVKIKV AKII                                         ++TS AI   LSHVENLITGVTKGYRYKMRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASITN NKS+EI NFLGEKK                                         KCH KNKDI KFLDGIYV+ KG V+EEE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

TrEMBL top hitse value%identityAlignment
A0A2N9HJZ1 Uncharacterized protein3.4e-2946.91Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI +GVKIKV AKII                                         ++TS AI   LSHVENLITGVTKGYRYKMRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASITN NKS+EI NFLGEKK                                         KCH KNKDI KFLDGIYV+ KG++LEEE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

A0A6J1E338 60S ribosomal protein L9-like5.8e-2947.42Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI EGVKIKV AKII                                         ++TS AI   LSHVENLITGVTKGYRYKMRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASITN NKS+EI NFLGEKK                                         KCH KNKDI KFLDGIYV+ KG V+EEE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

A0A6J1IBY5 60S ribosomal protein L9-like4.5e-2947.42Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI EGVKIKV AKII                                         ++TS AI   LSHVENLITGVTKGYRYKMRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASITN NKS+EI NFLGEKK                                         KCH KNKDI KFLDGIYV+ KG V+EEE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

A0A6N2MPW8 Ribosomal_L6 domain-containing protein9.0e-3050.3Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYAH
        MK ILSS+ MDI +GVK+K+ A+II                                        ++TS AI   LSHVENLITGVTKGYRYKMRFVYAH
Subjt:  MKMILSSKAMDILEGVKIKVIAKII----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYAH

Query:  FPINASITNDNKSMEICNFLGEK-----------------KKCHFKNKDIWKFLDGIYVNAKGNVLEEE
        FPINASI+N N ++EI NFLGEK                 KKCH KNKDI KFLDGIYV+ KG V+EEE
Subjt:  FPINASITNDNKSMEICNFLGEK-----------------KKCHFKNKDIWKFLDGIYVNAKGNVLEEE

A0A6P3ZJN6 60S ribosomal protein L9 isoform X15.8e-2946.91Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI EGVKIKV AKII                                         ++TS AI   LSHVENLITGVTKGYRYKMRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASITN NKS+EI NFLGEKK                                         KCH KNKDI KFLDGIYV+ KG ++EEE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

SwissProt top hitse value%identityAlignment
P30707 60S ribosomal protein L91.4e-2744.04Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYAH
        MK ILSS+ M+I +GV IKV AK+I                                        ++TS AI   LSHVENLITGVTKG+RYKMRFVYA 
Subjt:  MKMILSSKAMDILEGVKIKVIAKII----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYAH

Query:  FPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        FPINASITNDNKS+EI NFLGEKK                                         KCH K KDI KFLDGIYV+ KG V+ EE
Subjt:  FPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

P49209 60S ribosomal protein L9-16.4e-2540.21Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI + V IKV AK+I                                         ++TS +I   LSHV+NLI+GVT+G+RYKMRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASI  D KS+EI NFLGEKK                                         KCH K KDI KFLDGIYV+ K  ++EEE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

P49210 60S ribosomal protein L92.0e-2640.74Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYAHFPI
        MK IL+S+ M+I EGV ++V AK++                                     + T  AI   +SHV+NLITGVTKGYRYKMRFVYAHFPI
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYAHFPI

Query:  NASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEE
        NASITN N ++EI NFLGEKK                                         KCH KNKDI KFLDGIYV+ KG + E+
Subjt:  NASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEE

P51401 60S ribosomal protein L9-B3.5e-1540.68Show/hide
Query:  SHVENLITGVTKGYRYKMRFVYAHFPINASITNDN--KSMEICNFLGEKK-----------------------------------------KCHFKNKDI
        S V+N+ITGVTKGY+YKMR+VYAHFPIN +I   +  K +E+ NFLG+KK                                          C  +NKDI
Subjt:  SHVENLITGVTKGYRYKMRFVYAHFPINASITNDN--KSMEICNFLGEKK-----------------------------------------KCHFKNKDI

Query:  WKFLDGIYVNAKGNVLEE
         KFLDGIYV+ KG ++E+
Subjt:  WKFLDGIYVNAKGNVLEE

Q9SZX9 60S ribosomal protein L9-24.2e-2439.69Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI +GV IKV AK+I                                         ++TS +I   LSHV+NLI GVT+G+ Y+MRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASI  +NKS+EI NFLGEKK                                         KCH K KDI KFLDGIYV+ KG +  EE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

Arabidopsis top hitse value%identityAlignment
AT1G33120.1 Ribosomal protein L6 family4.6e-2640.21Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI + V IKV AK+I                                         ++TS +I   LSHV+NLI+GVT+G+RYKMRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASI  D KS+EI NFLGEKK                                         KCH K KDI KFLDGIYV+ K  ++EEE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

AT1G33140.1 Ribosomal protein L6 family4.6e-2640.21Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI + V IKV AK+I                                         ++TS +I   LSHV+NLI+GVT+G+RYKMRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASI  D KS+EI NFLGEKK                                         KCH K KDI KFLDGIYV+ K  ++EEE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE

AT4G10450.1 Ribosomal protein L6 family3.0e-2539.69Show/hide
Query:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA
        MK ILSS+ MDI +GV IKV AK+I                                         ++TS +I   LSHV+NLI GVT+G+ Y+MRFVYA
Subjt:  MKMILSSKAMDILEGVKIKVIAKII-----------------------------------------KETSVAICMTLSHVENLITGVTKGYRYKMRFVYA

Query:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE
        HFPINASI  +NKS+EI NFLGEKK                                         KCH K KDI KFLDGIYV+ KG +  EE
Subjt:  HFPINASITNDNKSMEICNFLGEKK-----------------------------------------KCHFKNKDIWKFLDGIYVNAKGNVLEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGATCCTCTCATCGAAAGCTATGGATATCCTCGAGGGGGTGAAGATCAAAGTGATTGCCAAAATCATCAAGGAAACTTCTGTTGCCATTTGCATGACCCTTAG
CCATGTTGAGAATCTCATCACTGGTGTCACCAAGGGCTATCGTTACAAGATGCGATTTGTTTATGCTCACTTTCCGATCAATGCTAGCATAACCAACGACAACAAGTCCA
TGGAGATCTGTAACTTTCTTGGTGAGAAAAAGAAATGCCATTTCAAGAACAAAGATATCTGGAAGTTCCTTGATGGTATTTATGTTAACGCAAAGGGAAATGTTCTCGAA
GAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGATCCTCTCATCGAAAGCTATGGATATCCTCGAGGGGGTGAAGATCAAAGTGATTGCCAAAATCATCAAGGAAACTTCTGTTGCCATTTGCATGACCCTTAG
CCATGTTGAGAATCTCATCACTGGTGTCACCAAGGGCTATCGTTACAAGATGCGATTTGTTTATGCTCACTTTCCGATCAATGCTAGCATAACCAACGACAACAAGTCCA
TGGAGATCTGTAACTTTCTTGGTGAGAAAAAGAAATGCCATTTCAAGAACAAAGATATCTGGAAGTTCCTTGATGGTATTTATGTTAACGCAAAGGGAAATGTTCTCGAA
GAAGAGTGA
Protein sequenceShow/hide protein sequence
MKMILSSKAMDILEGVKIKVIAKIIKETSVAICMTLSHVENLITGVTKGYRYKMRFVYAHFPINASITNDNKSMEICNFLGEKKKCHFKNKDIWKFLDGIYVNAKGNVLE
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