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Lag0042191 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0042191
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionexonuclease 1
Genome locationchr13:38383790..38384843
RNA-Seq ExpressionLag0042191
SyntenyLag0042191
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0006979 - response to oxidative stress (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0004527 - exonuclease activity (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0017108 - 5'-flap endonuclease activity (molecular function)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006084 - XPG/Rad2 endonuclease
IPR006085 - XPG, N-terminal
IPR029060 - PIN-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019920.1 Exonuclease 1 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-1981.82Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP
        RINLLRHYKIVPVVVF GGNVPCK ATEQ+R +RRE N+ELAMEKLKEGNVGAA ELFQ   NI P
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP

XP_022137457.1 exonuclease 1 [Momordica charantia]3.9e-2084.85Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP
        RINLLRHYKIVPVVVF GGNVPCKAATEQER ++RE NKELAMEKLKEGNVGAA ELFQ   NI P
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP

XP_022923945.1 exonuclease 1 [Cucurbita moschata]3.3e-1981.82Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP
        RINLLRHYKIVPVVVF GGNVPCK ATEQ+R +RRE N+ELAMEKLKEGNVGAA ELFQ   NI P
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP

XP_023001042.1 exonuclease 1 [Cucurbita maxima]1.5e-1983.33Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP
        RINLLRHYKIVPVVVF GGNVPCK ATEQER +RRE N+ELAMEKLKEGNVGAA ELFQ   NI P
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP

XP_023519641.1 exonuclease 1 [Cucurbita pepo subsp. pepo]1.5e-1983.33Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP
        RINLLRHYKIVPVVVF GGNVPCK ATEQER +RRE N+ELAMEKLKEGNVGAA ELFQ   NI P
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP

TrEMBL top hitse value%identityAlignment
A0A1S3CHX5 exonuclease 11.5e-1774.24Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP
        RINLLRHYKIVPVVVF GGN+PCKA T+QER +++E N+ELAMEKLKEGN+ AA ELFQ   NI P
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP

A0A5D3BIB4 Exonuclease 11.5e-1774.24Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP
        RINLLRHYKIVPVVVF GGN+PCKA T+QER +++E N+ELAMEKLKEGN+ AA ELFQ   NI P
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP

A0A6J1C8B0 exonuclease 11.9e-2084.85Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP
        RINLLRHYKIVPVVVF GGNVPCKAATEQER ++RE NKELAMEKLKEGNVGAA ELFQ   NI P
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP

A0A6J1EDD8 exonuclease 11.6e-1981.82Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP
        RINLLRHYKIVPVVVF GGNVPCK ATEQ+R +RRE N+ELAMEKLKEGNVGAA ELFQ   NI P
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP

A0A6J1KFC4 exonuclease 17.2e-2083.33Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP
        RINLLRHYKIVPVVVF GGNVPCK ATEQER +RRE N+ELAMEKLKEGNVGAA ELFQ   NI P
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP

SwissProt top hitse value%identityAlignment
P53695 Exodeoxyribonuclease 14.8e-0541.82Show/hide
Query:  LLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELF
        +L++Y + P++VF GG +PCKA+TEQ+R++RR+   EL  +   EG    A   F
Subjt:  LLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELF

Q54ED2 Exonuclease 11.7e-0546.67Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQE
        RI +L  YK++PVV+F GG +P K   EQER + RE  K  A   L EGN   A   FQ+
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQE

Q60GC1 Exonuclease 15.2e-0743.33Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQE
        R+N+LRH+ + P++VF GG++P K   E +R + R+ N E A E    GN  AAFE +Q+
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQE

Q803U7 Exonuclease 12.4e-0435.38Show/hide
Query:  INLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP
        +++L  + + P++VF G N+P K   E+ RR+RR+ N +   + L+EG +  A E F    NI P
Subjt:  INLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQED-NIAP

Q8L6Z7 Exonuclease 17.5e-0640Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQE
        R+NLLRH+ + P++VF GG +P K   E +R + R+ N   A+E    GN  AA+E + +
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQE

Arabidopsis top hitse value%identityAlignment
AT1G18090.1 5'-3' exonuclease family protein2.1e-1666.1Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQ
        R+NLL+HY+I+PVVV  GGN+PCKAAT  ER ++R+ N + AM KLKEGNV AA ELFQ
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQ

AT1G18090.2 5'-3' exonuclease family protein2.8e-1666.1Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQ
        R+NLL+HY+I+PVVV  GGN+PCKAAT  ER ++R+ N + AM KLKEGNV AA ELFQ
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQ

AT1G29630.1 5'-3' exonuclease family protein5.3e-0740Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQE
        R+NLLRH+ + P++VF GG +P K   E +R + R+ N   A+E    GN  AA+E + +
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQE

AT1G29630.2 5'-3' exonuclease family protein5.3e-0740Show/hide
Query:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQE
        R+NLLRH+ + P++VF GG +P K   E +R + R+ N   A+E    GN  AA+E + +
Subjt:  RINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTATTCGTGGCTGCACAAGGGAGGTAAGAATCAATCTGCTTCGACATTACAAGATAGTTCCAGTTGTTGTTTTTTATGGTGGGAATGTTCCGTGTAAGGCAGCCAC
TGAGCAAGAGCGGCGCAAAAGAAGAGAGGTAAACAAGGAATTAGCGATGGAGAAGTTGAAAGAAGGGAATGTTGGTGCTGCCTTTGAGCTTTTCCAGGAAGACAACATTG
CGCCGCTCCCCACAGTTGCAGAACCCCCCACAACACGCGAGAATGGTGAGATTCTTCCTAGGTATGTTGAGATCAGAAGGCTTGTTCTCATCAATTACGAGCTCGTTGTC
ATCGTTGATGTTATCAACCAGAATCGGATAAACATTCCTTTCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTATTCGTGGCTGCACAAGGGAGGTAAGAATCAATCTGCTTCGACATTACAAGATAGTTCCAGTTGTTGTTTTTTATGGTGGGAATGTTCCGTGTAAGGCAGCCAC
TGAGCAAGAGCGGCGCAAAAGAAGAGAGGTAAACAAGGAATTAGCGATGGAGAAGTTGAAAGAAGGGAATGTTGGTGCTGCCTTTGAGCTTTTCCAGGAAGACAACATTG
CGCCGCTCCCCACAGTTGCAGAACCCCCCACAACACGCGAGAATGGTGAGATTCTTCCTAGGTATGTTGAGATCAGAAGGCTTGTTCTCATCAATTACGAGCTCGTTGTC
ATCGTTGATGTTATCAACCAGAATCGGATAAACATTCCTTTCTTATAA
Protein sequenceShow/hide protein sequence
MPIRGCTREVRINLLRHYKIVPVVVFYGGNVPCKAATEQERRKRREVNKELAMEKLKEGNVGAAFELFQEDNIAPLPTVAEPPTTRENGEILPRYVEIRRLVLINYELVV
IVDVINQNRINIPFL