; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy00g001030 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy00g001030
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionG-patch domain-containing protein
Genome locationChr00:17444906..17447337
RNA-Seq ExpressionLcy00g001030
SyntenyLcy00g001030
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF27092.1 conserved hypothetical protein [Ricinus communis]5.3e-1292.45Show/hide
Query:  VLVKSVESLFNVTSSEDGLQSVPSVSVIISEVE-SALEARESVIKELVVCNEM
        VLVKSVESLFNVTSSEDGL+SVPSVSVIISEVE SAL ARESVIKELVVCNE+
Subjt:  VLVKSVESLFNVTSSEDGLQSVPSVSVIISEVE-SALEARESVIKELVVCNEM
TrEMBL top hitse value%identityAlignment
B9TAM0 G-patch domain-containing protein2.6e-1292.45Show/hide
Query:  VLVKSVESLFNVTSSEDGLQSVPSVSVIISEVE-SALEARESVIKELVVCNEM
        VLVKSVESLFNVTSSEDGL+SVPSVSVIISEVE SAL ARESVIKELVVCNE+
Subjt:  VLVKSVESLFNVTSSEDGLQSVPSVSVIISEVE-SALEARESVIKELVVCNEM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGGCAATACCATTACTATTTAGATTTCCAAGGGATGATTACTTATGACTCTTTGATTGAAGCAGCCACTCGTATTGAAGATGCTATCTACAATGGGACTCATGG
ATCACAGGTCAAAGAGGCAGATCCAAAAGGAAAGAAGATAGCCCTGGGGGGAACAAGCAAGAACAGTGAAGTCAATGTCTTGTCTGACGTAAAGCCAAAGACACCCAGGA
CTTTCCCTCCGTTAGGCATAACTCTCGCCGCGCCTTGGAAAAGCTTCAAAAGCATGGTGTACTCACGCCTCTTCCCCCATCTCCGCCACCAGATCCTCTTCCTCCTAGTC
TTAGTCAAGTCTGTTGAGTCCCTGTTTAATGTAACCTCTTCGGAGGATGGTCTTCAGTCTGTCCCGTCAGTGTCTGTTATCATTTCTGAAGTCGAGTCGGCCCTGGAGGC
CAGAGAGTCTGTAATCAAGGAACTTGTGGTTTGCAATGAAATGAAATCTAGGGTTGCTTATGTGTCGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAGGCAATACCATTACTATTTAGATTTCCAAGGGATGATTACTTATGACTCTTTGATTGAAGCAGCCACTCGTATTGAAGATGCTATCTACAATGGGACTCATGG
ATCACAGGTCAAAGAGGCAGATCCAAAAGGAAAGAAGATAGCCCTGGGGGGAACAAGCAAGAACAGTGAAGTCAATGTCTTGTCTGACGTAAAGCCAAAGACACCCAGGA
CTTTCCCTCCGTTAGGCATAACTCTCGCCGCGCCTTGGAAAAGCTTCAAAAGCATGGTGTACTCACGCCTCTTCCCCCATCTCCGCCACCAGATCCTCTTCCTCCTAGTC
TTAGTCAAGTCTGTTGAGTCCCTGTTTAATGTAACCTCTTCGGAGGATGGTCTTCAGTCTGTCCCGTCAGTGTCTGTTATCATTTCTGAAGTCGAGTCGGCCCTGGAGGC
CAGAGAGTCTGTAATCAAGGAACTTGTGGTTTGCAATGAAATGAAATCTAGGGTTGCTTATGTGTCGGAGTGA
Protein sequenceShow/hide protein sequence
MSRQYHYYLDFQGMITYDSLIEAATRIEDAIYNGTHGSQVKEADPKGKKIALGGTSKNSEVNVLSDVKPKTPRTFPPLGITLAAPWKSFKSMVYSRLFPHLRHQILFLLV
LVKSVESLFNVTSSEDGLQSVPSVSVIISEVESALEARESVIKELVVCNEMKSRVAYVSE