; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy01g006010 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g006010
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptiontelomere repeat binding factor 1
Genome locationChr01:8603260..8609518
RNA-Seq ExpressionLcy01g006010
SyntenyLcy01g006010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042229.1 uncharacterized protein E6C27_scaffold824G00020 [Cucumis melo var. makuwa]5.2e-0562.07Show/hide
Query:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
        L+ GR   F         G  SN   SDLDLSY GS+DGES SDLGFSKWLESVRGKP
Subjt:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
XP_004149017.1 uncharacterized protein LOC101215704 [Cucumis sativus]5.2e-0562.07Show/hide
Query:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
        L+ GR   F         G  SN   SDLDLSY GS+DGES SDLGFSKWLESVRGKP
Subjt:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
XP_008451102.1 PREDICTED: uncharacterized protein LOC103492482 [Cucumis melo]5.2e-0562.07Show/hide
Query:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
        L+ GR   F         G  SN   SDLDLSY GS+DGES SDLGFSKWLESVRGKP
Subjt:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
XP_022988190.1 uncharacterized protein LOC111485505 [Cucurbita maxima]7.6e-0460.34Show/hide
Query:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
        L+ GR   F         G  SN   SDL+LS  GSADGES SDLGFSKWLESVRGKP
Subjt:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
XP_038878616.1 uncharacterized protein LOC120070805 [Benincasa hispida]2.3e-0563.79Show/hide
Query:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
        L+ GR   F         G  SN   SDLDLSY GSADGES SDLGFSKWLESVRGKP
Subjt:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
TrEMBL top hitse value%identityAlignment
A0A0A0LX12 Uncharacterized protein2.5e-0562.07Show/hide
Query:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
        L+ GR   F         G  SN   SDLDLSY GS+DGES SDLGFSKWLESVRGKP
Subjt:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
A0A1S3BQQ9 uncharacterized protein LOC1034924822.5e-0562.07Show/hide
Query:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
        L+ GR   F         G  SN   SDLDLSY GS+DGES SDLGFSKWLESVRGKP
Subjt:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
A0A5A7TLK8 Uncharacterized protein2.5e-0562.07Show/hide
Query:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
        L+ GR   F         G  SN   SDLDLSY GS+DGES SDLGFSKWLESVRGKP
Subjt:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
A0A6J1HAL9 uncharacterized protein LOC1114616104.8e-0460.34Show/hide
Query:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
        L+ GR   F         G  SN   SDL+LS  GSADGES SDLGFSKWLESVRGKP
Subjt:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
A0A6J1JIW4 uncharacterized protein LOC1114855053.7e-0460.34Show/hide
Query:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
        L+ GR   F         G  SN   SDL+LS  GSADGES SDLGFSKWLESVRGKP
Subjt:  LFRGRSKRFLRRRTQNRGGGSSNS--SDLDLSYEGSADGESISDLGFSKWLESVRGKP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49950.1 telomere repeat binding factor 12.1e-0457.89Show/hide
Query:  SFGLFLESLVNLISPPDFKRLLSTKLKFLTAIGKLVKM
        + G ++E   +  +PPDFKRLLSTKLK+LT+ GKLVK+
Subjt:  SFGLFLESLVNLISPPDFKRLLSTKLKFLTAIGKLVKM
AT1G49950.2 telomere repeat binding factor 12.1e-0457.89Show/hide
Query:  SFGLFLESLVNLISPPDFKRLLSTKLKFLTAIGKLVKM
        + G ++E   +  +PPDFKRLLSTKLK+LT+ GKLVK+
Subjt:  SFGLFLESLVNLISPPDFKRLLSTKLKFLTAIGKLVKM
AT1G49950.3 telomere repeat binding factor 12.1e-0457.89Show/hide
Query:  SFGLFLESLVNLISPPDFKRLLSTKLKFLTAIGKLVKM
        + G ++E   +  +PPDFKRLLSTKLK+LT+ GKLVK+
Subjt:  SFGLFLESLVNLISPPDFKRLLSTKLKFLTAIGKLVKM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTATTTTTTCTTCTTCACGCTGTTTCCTCCTCCGAGCTCAGTGTCGCTGCCGCCTCTCTTCCGCTTGTGTCGCCGCCATCGTCTTTCTTCCGTTCGTGCCGCTG
TCGTCTTTCTTCCGCTCGTGCCGCCGCAACGTTCCTTGATTTTCTACTCCGTTGCTGTTACTGTCGACTGCCATCCTCAGGCGACGTGTACCACGAACTCGAAGATGGTG
TCAGCTGCAGCAGTGCCAATCTCACTCTCTGGCGTCCAATAACCACAACAACCGGCGGTGGATGTTTATTCCGTGGTCGATCCAAGCGATTCTTGCGACGGCGAACCCAG
AATCGTGGCGGTGGCTCTTCCAACTCTAGCGATTTGGACTTGTCCTATGAAGGTAGTGCTGATGGGGAAAGTATTAGTGATTTGGGGTTTTCTAAGTGGTTGGAGAGTGT
AAGAGGAAAGCCAGGTGAAGGAGATGGGTTTCTAATGGAGATTGAGGTTTTGGATTTTAGTTCGGAACAATTTGTTCCGTCATTTGGTTTGTTCTTGGAGAGCCTCGTGA
ATCTCATCTCACCTCCAGACTTCAAGAGGTTGTTATCAACAAAATTGAAGTTCTTAACAGCTATTGGTAAACTGGTCAAGATGTTGTACATAAAGGATCTCCAGCGTTTT
GTACATAAGAATTTCTCTATATTGGTGTTATATGGCTCTGCATCATTTTCAGGTCTGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCACTTATTTTTTCTTCTTCACGCTGTTTCCTCCTCCGAGCTCAGTGTCGCTGCCGCCTCTCTTCCGCTTGTGTCGCCGCCATCGTCTTTCTTCCGTTCGTGCCGCTG
TCGTCTTTCTTCCGCTCGTGCCGCCGCAACGTTCCTTGATTTTCTACTCCGTTGCTGTTACTGTCGACTGCCATCCTCAGGCGACGTGTACCACGAACTCGAAGATGGTG
TCAGCTGCAGCAGTGCCAATCTCACTCTCTGGCGTCCAATAACCACAACAACCGGCGGTGGATGTTTATTCCGTGGTCGATCCAAGCGATTCTTGCGACGGCGAACCCAG
AATCGTGGCGGTGGCTCTTCCAACTCTAGCGATTTGGACTTGTCCTATGAAGGTAGTGCTGATGGGGAAAGTATTAGTGATTTGGGGTTTTCTAAGTGGTTGGAGAGTGT
AAGAGGAAAGCCAGGTGAAGGAGATGGGTTTCTAATGGAGATTGAGGTTTTGGATTTTAGTTCGGAACAATTTGTTCCGTCATTTGGTTTGTTCTTGGAGAGCCTCGTGA
ATCTCATCTCACCTCCAGACTTCAAGAGGTTGTTATCAACAAAATTGAAGTTCTTAACAGCTATTGGTAAACTGGTCAAGATGTTGTACATAAAGGATCTCCAGCGTTTT
GTACATAAGAATTTCTCTATATTGGTGTTATATGGCTCTGCATCATTTTCAGGTCTGAACTAA
Protein sequenceShow/hide protein sequence
MHLFFLLHAVSSSELSVAAASLPLVSPPSSFFRSCRCRLSSARAAATFLDFLLRCCYCRLPSSGDVYHELEDGVSCSSANLTLWRPITTTTGGGCLFRGRSKRFLRRRTQ
NRGGGSSNSSDLDLSYEGSADGESISDLGFSKWLESVRGKPGEGDGFLMEIEVLDFSSEQFVPSFGLFLESLVNLISPPDFKRLLSTKLKFLTAIGKLVKMLYIKDLQRF
VHKNFSILVLYGSASFSGLN