; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy01g006170 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g006170
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationChr01:8814680..8829876
RNA-Seq ExpressionLcy01g006170
SyntenyLcy01g006170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026022.1 hypothetical protein SDJN02_12520, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-4850.45Show/hide
Query:  MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALH
        M  I + PV PL   + PLT+IATQADV ISP   ++TVSQ+ PRF+ VLQ+T  FF SFLV Q L ARICLD+FHT L+ A    A++IN ++    L 
Subjt:  MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALH

Query:  LRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQ
        L +EN+    + R+ LELLP E  + D+  IDFTN VSI   +F RIV  ELSV+Y+DR+C+T + SQ+K + G K+ IL++E GE+V ++ Q   V+ +
Subjt:  LRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQ

Query:  FHFTIHPMTFFGDLTDRSRR
        F F+IHP +FF +LTD+SRR
Subjt:  FHFTIHPMTFFGDLTDRSRR

XP_022145570.1 uncharacterized protein LOC111014988 [Momordica charantia]2.4e-5052.7Show/hide
Query:  MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALH
        MFLIR+QP+ PLF+ IC LTRIAT+ADVK SP +  I VSQ SP FIA LQM+  FF SF V+    +RICLD+ H+ LM+   +PAMT + L+++  L 
Subjt:  MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALH

Query:  LRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQ
        LR+ENS+N P  R EL+L PSEEE  DV +ID+ N VSI S EF  IV  +LS  +  RIC TLT+SQVKF+   +E+IL+KE G+ +++   E  V+ +
Subjt:  LRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQ

Query:  FHFTIHPMTFFGDLTDRSRRVW
        F FT+HP +FF DL D+   VW
Subjt:  FHFTIHPMTFFGDLTDRSRRVW

XP_022964069.1 uncharacterized protein LOC111464206 [Cucurbita moschata]6.7e-3249.07Show/hide
Query:  VNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALHLRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRIC
        V Q L ARICLD+FHT L+ A    A++IN ++    L L +EN+    + R+ LELLP E  + D+  IDFTN VSI   +F RIV  ELSV+Y+DR+C
Subjt:  VNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALHLRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRIC

Query:  VTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQFHFTIHPMTFFGDLTDRSRRVW
        +T + SQ+K + G K+ IL++E GE+V ++ QE  V+ +F F+IHP +FF +LTD+SRRVW
Subjt:  VTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQFHFTIHPMTFFGDLTDRSRRVW

XP_023514482.1 uncharacterized protein LOC111778741 [Cucurbita pepo subsp. pepo]3.9e-3249.07Show/hide
Query:  VNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALHLRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRIC
        V Q L ARICLD+FHT L+ A    A++IN ++    L L +EN+    + R+ LELLP E  + D+  IDFTN VSI   +F RIV  ELSV+YQDR+C
Subjt:  VNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALHLRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRIC

Query:  VTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQFHFTIHPMTFFGDLTDRSRRVW
        +T + SQ+K + G K+ IL++E GE+V ++ Q+  V+ +F F+IHP +FF +LTD+SRRVW
Subjt:  VTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQFHFTIHPMTFFGDLTDRSRRVW

XP_031744160.1 uncharacterized protein LOC116404808 [Cucumis sativus]7.9e-3339.64Show/hide
Query:  MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALH
        MFL+R++  +P F     L  IA +ADVK +P   SITVS   PRF+A L MT+  F ++ V+    +RI L++FH  L++    P+MTI+ L +   + 
Subjt:  MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALH

Query:  LRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQ
        LR+E+S + P  R EL L PS+EE  D+ +ID+    SIDS    R++++ L + + D ICVT T SQVKF+  +KE++L+KE+ E +++ G E   + +
Subjt:  LRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQ

Query:  FHFTIHPMTFFGDLTDRSRRVW
            ++PM FF + T  + RVW
Subjt:  FHFTIHPMTFFGDLTDRSRRVW

TrEMBL top hitse value%identityAlignment
A0A1S4E4N8 uncharacterized protein LOC1035022633.6e-3139.23Show/hide
Query:  MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALH
        MFL+R++  DPLF+    L +IA +AD+K +P   SI  S  SPRF+A LQMTH  F ++ V+    +RI L++FH  L++    P+MTI+ L +   L 
Subjt:  MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALH

Query:  LRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQE-DLVDK
        LR+E+S + P    EL L PS+EE  D+ ++D+    SIDS +  R++++ L + + D ICVT T SQVKF+  +KE++L+KE   F+     E D++++
Subjt:  LRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQE-DLVDK

Query:  QFHFTIHPM
        +    +  M
Subjt:  QFHFTIHPM

A0A6J1CUU8 uncharacterized protein LOC1110149881.2e-5052.7Show/hide
Query:  MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALH
        MFLIR+QP+ PLF+ IC LTRIAT+ADVK SP +  I VSQ SP FIA LQM+  FF SF V+    +RICLD+ H+ LM+   +PAMT + L+++  L 
Subjt:  MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALH

Query:  LRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQ
        LR+ENS+N P  R EL+L PSEEE  DV +ID+ N VSI S EF  IV  +LS  +  RIC TLT+SQVKF+   +E+IL+KE G+ +++   E  V+ +
Subjt:  LRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQ

Query:  FHFTIHPMTFFGDLTDRSRRVW
        F FT+HP +FF DL D+   VW
Subjt:  FHFTIHPMTFFGDLTDRSRRVW

A0A6J1HM20 uncharacterized protein LOC1114642063.2e-3249.07Show/hide
Query:  VNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALHLRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRIC
        V Q L ARICLD+FHT L+ A    A++IN ++    L L +EN+    + R+ LELLP E  + D+  IDFTN VSI   +F RIV  ELSV+Y+DR+C
Subjt:  VNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALHLRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRIC

Query:  VTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQFHFTIHPMTFFGDLTDRSRRVW
        +T + SQ+K + G K+ IL++E GE+V ++ QE  V+ +F F+IHP +FF +LTD+SRRVW
Subjt:  VTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQFHFTIHPMTFFGDLTDRSRRVW

A0A6J1KE78 uncharacterized protein LOC1114941899.4e-3249.07Show/hide
Query:  VNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALHLRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRIC
        V Q L ARICLD+FHT L+ A    A++IN L+    L L +EN+    + R+ L+LLP E  + D+  IDFTN VSI   +F RIV  ELSV+YQDR+C
Subjt:  VNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALHLRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRIC

Query:  VTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQFHFTIHPMTFFGDLTDRSRRVW
        +T + SQ+K + G K+ IL++E GE+V ++ Q   V+ +F F+IHP +FF +LTD+SRRVW
Subjt:  VTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQFHFTIHPMTFFGDLTDRSRRVW

A0A6J1KIW5 uncharacterized protein LOC1114948742.6e-2935.59Show/hide
Query:  MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALH
        MFL+R++   PL +G   L +IA ++D+  +P  L +T S+ SPRFIA LQ+ H+ F  + VN    +RI L++ H  L++     AMTI+ L++   + 
Subjt:  MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALH

Query:  LRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQ
        LR+E   + P  R +  LLP +E+ ++  +I+++ S+++DS + LR V  EL + + D +CVT+T+S+V+F+  ++E+I  KE G   ++    D V  +
Subjt:  LRYENSKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQ

Query:  FHFTIHPMTFFGDLTDRSRRVW
        F   ++PM FF +LT   + VW
Subjt:  FHFTIHPMTFFGDLTDRSRRVW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTAATCAGAGTTCAGCCTGTGGATCCTCTTTTCGAAGGAATATGCCCTCTCACTCGAATCGCAACACAAGCCGACGTCAAAATCTCGCCGGAGGAGTTG
AGCATAACGGTGTCCCAACATTCCCCTCGCTTCATTGCAGTGCTTCAAATGACCCATCGATTCTTCAACTCCTTTTTGGTCAATCAAGGTCTCATTGCCAGAATT
TGCCTCGACACTTTCCACACCAAATTGATGGAAGCCACTCACTTTCCTGCAATGACCATCAATTTTCTCCAAGACAAACTCGCCCTCCACCTCAGATATGAGAAT
TCAAAGAATCGACCAGTGTGGCGTGAGGAATTGGAACTGTTGCCTTCAGAAGAGGAGGAGGTAGACGTGAGTAAAATTGACTTTACAAACAGTGTCTCAATTGAT
TCAACAGAGTTTCTACGCATTGTACAAGACGAGCTATCTGTCACCTACCAAGATAGAATTTGTGTCACACTAACGAATTCTCAAGTCAAGTTCACCGCTGGAGCT
AAAGAGGTTATCCTTTCCAAAGAGGATGGAGAATTTGTACTTATGGATGGTCAAGAAGATTTAGTTGATAAACAATTCCATTTCACAATCCATCCCATGACGTTC
TTCGGTGATCTGACCGATAGGTCGAGAAGGGTGTGGACAATTAACCTATCCTTCCTCTCCCAACTCCTTGGTATAGCAAAATCCTCTAGAGATTTTAACCCTGAT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTAATCAGAGTTCAGCCTGTGGATCCTCTTTTCGAAGGAATATGCCCTCTCACTCGAATCGCAACACAAGCCGACGTCAAAATCTCGCCGGAGGAGTTG
AGCATAACGGTGTCCCAACATTCCCCTCGCTTCATTGCAGTGCTTCAAATGACCCATCGATTCTTCAACTCCTTTTTGGTCAATCAAGGTCTCATTGCCAGAATT
TGCCTCGACACTTTCCACACCAAATTGATGGAAGCCACTCACTTTCCTGCAATGACCATCAATTTTCTCCAAGACAAACTCGCCCTCCACCTCAGATATGAGAAT
TCAAAGAATCGACCAGTGTGGCGTGAGGAATTGGAACTGTTGCCTTCAGAAGAGGAGGAGGTAGACGTGAGTAAAATTGACTTTACAAACAGTGTCTCAATTGAT
TCAACAGAGTTTCTACGCATTGTACAAGACGAGCTATCTGTCACCTACCAAGATAGAATTTGTGTCACACTAACGAATTCTCAAGTCAAGTTCACCGCTGGAGCT
AAAGAGGTTATCCTTTCCAAAGAGGATGGAGAATTTGTACTTATGGATGGTCAAGAAGATTTAGTTGATAAACAATTCCATTTCACAATCCATCCCATGACGTTC
TTCGGTGATCTGACCGATAGGTCGAGAAGGGTGTGGACAATTAACCTATCCTTCCTCTCCCAACTCCTTGGTATAGCAAAATCCTCTAGAGATTTTAACCCTGAT
TGA
Protein sequenceShow/hide protein sequence
MFLIRVQPVDPLFEGICPLTRIATQADVKISPEELSITVSQHSPRFIAVLQMTHRFFNSFLVNQGLIARICLDTFHTKLMEATHFPAMTINFLQDKLALHLRYEN
SKNRPVWREELELLPSEEEEVDVSKIDFTNSVSIDSTEFLRIVQDELSVTYQDRICVTLTNSQVKFTAGAKEVILSKEDGEFVLMDGQEDLVDKQFHFTIHPMTF
FGDLTDRSRRVWTINLSFLSQLLGIAKSSRDFNPD