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Lcy01g007360 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g007360
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr01:12864776..12865623
RNA-Seq ExpressionLcy01g007360
SyntenyLcy01g007360
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]5.7e-1930.62Show/hide
Query:  HSTRYGSEEDPIDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDA--PIIDGNVGLGMIIRNHKGETMAAVECYRKLRCSVEWT
        H +   +  D + W  NF  E+  A   +H          + PS  W +P   +FK+N DA   +  G  G+G+IIR++KG  +AA         SVE  
Subjt:  HSTRYGSEEDPIDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDA--PIIDGNVGLGMIIRNHKGETMAAVECYRKLRCSVEWT

Query:  KAKALVDGVHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGI
        +A+A ++G+HLA+D G+  +  E+D+  V  L+SD+     E+  +I     L  S ++  ++   RE N VAH +  HA +     VW E+ PP    +
Subjt:  KAKALVDGVHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGI

Query:  LAQEMPTTV
        +  + PT+V
Subjt:  LAQEMPTTV

TXG70342.1 hypothetical protein EZV62_005277 [Acer yangbiense]5.8e-1629.65Show/hide
Query:  IDWASNFIMEYSEAQTPSHISKERSRRADNVPSTV---WTSPPINQFKLNIDAPI-IDGN-VGLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKALVDG
        + W +N + E+  A         +  R +NV   +   W  P    FK+N DA I ++GN VG+ +IIR+ +G  MA+         S + T+A A++  
Subjt:  IDWASNFIMEYSEAQTPSHISKERSRRADNVPSTV---WTSPPINQFKLNIDAPI-IDGN-VGLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKALVDG

Query:  VHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGILAQEMPT
        +HLALD G+ P   E+D+Q+V N +     H +E+   ++ ++       +     TPR  N  AH LV    +   D  W+E+CPP  + ++    PT
Subjt:  VHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGILAQEMPT

XP_008238309.1 PREDICTED: uncharacterized protein LOC103336955 [Prunus mume]4.5e-1631.77Show/hide
Query:  SNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAPIIDGNV--GLGMIIRNHKGETMAAVECYRKLRCS--VEWTKAKALVDGVHLAL
        + F  E+ +A   SH+S  R + +  V S VW  P    +K+N+D  I  G+   G+G+++RN KGE MAA  C R+L+ S     T+  A ++G+  A+
Subjt:  SNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAPIIDGNV--GLGMIIRNHKGETMAAVECYRKLRCS--VEWTKAKALVDGVHLAL

Query:  DAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGILAQEM
        D G      E D+Q   N +   ++     APLI+ +  L           TPR GN+VAH L   A        W+E+ P W   +L  ++
Subjt:  DAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGILAQEM

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]5.1e-2032.24Show/hide
Query:  IDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAPII--DGNVGLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKALVDGVHL
        ++WA+ ++ME+ EA      S     R  N    +W  P    +K+N DA  +  D + GLG+IIRN +G+ MA+   Y +   SV+  +A   V+G+ L
Subjt:  IDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAPII--DGNVGLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKALVDGVHL

Query:  ALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCP
        A   G+ P+  ETDS  ++NL S   +  +E   ++   K          F    REGN+ AHML   A   +   +W+ED P
Subjt:  ALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCP

XP_030923211.1 uncharacterized protein LOC115950102 [Quercus lobata]3.1e-1737.09Show/hide
Query:  TVWTSPPINQFKLNIDAPIID--GNVGLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKALVDGVHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIA
        TVW  PP + FKLN DA I      +G+G+II N+KGE MAA+   R    S E  +  A    V  A+DAG   +  E  +  V   +S ++ + + + 
Subjt:  TVWTSPPINQFKLNIDAPIID--GNVGLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKALVDGVHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIA

Query:  PLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPP
         +++ +K L           T R GN+VAH+LV HART+  D  W+ED PP
Subjt:  PLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPP

TrEMBL top hitse value%identityAlignment
A0A5C7H0P0 Uncharacterized protein2.7e-1930.62Show/hide
Query:  HSTRYGSEEDPIDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDA--PIIDGNVGLGMIIRNHKGETMAAVECYRKLRCSVEWT
        H +   +  D + W  NF  E+  A   +H          + PS  W +P   +FK+N DA   +  G  G+G+IIR++KG  +AA         SVE  
Subjt:  HSTRYGSEEDPIDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDA--PIIDGNVGLGMIIRNHKGETMAAVECYRKLRCSVEWT

Query:  KAKALVDGVHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGI
        +A+A ++G+HLA+D G+  +  E+D+  V  L+SD+     E+  +I     L  S ++  ++   RE N VAH +  HA +     VW E+ PP    +
Subjt:  KAKALVDGVHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGI

Query:  LAQEMPTTV
        +  + PT+V
Subjt:  LAQEMPTTV

A0A5C7HKG9 Uncharacterized protein4.1e-1533.16Show/hide
Query:  DPIDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAP--IIDGNVGLGMIIRNHKGETMAAVECYRKLRC-SVEWTKAKALVDG
        D + W  NF  ++  A  P+H  KE            W  P + +FK+N D    +  G  G+G+IIRN+KG T+AA +    L C S+E  +A A + G
Subjt:  DPIDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAP--IIDGNVGLGMIIRNHKGETMAAVECYRKLRC-SVEWTKAKALVDG

Query:  VHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPP
        + LA+D GI  +  E+D++ V  L+S+      EI  +I+    L  S H+       R  N VAH L   A +     VWL+  PP
Subjt:  VHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPP

A0A5C7IPG1 RNase H domain-containing protein2.8e-1629.65Show/hide
Query:  IDWASNFIMEYSEAQTPSHISKERSRRADNVPSTV---WTSPPINQFKLNIDAPI-IDGN-VGLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKALVDG
        + W +N + E+  A         +  R +NV   +   W  P    FK+N DA I ++GN VG+ +IIR+ +G  MA+         S + T+A A++  
Subjt:  IDWASNFIMEYSEAQTPSHISKERSRRADNVPSTV---WTSPPINQFKLNIDAPI-IDGN-VGLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKALVDG

Query:  VHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGILAQEMPT
        +HLALD G+ P   E+D+Q+V N +     H +E+   ++ ++       +     TPR  N  AH LV    +   D  W+E+CPP  + ++    PT
Subjt:  VHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGILAQEMPT

A0A6J1CIF1 uncharacterized protein LOC1110112372.5e-2032.24Show/hide
Query:  IDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAPII--DGNVGLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKALVDGVHL
        ++WA+ ++ME+ EA      S     R  N    +W  P    +K+N DA  +  D + GLG+IIRN +G+ MA+   Y +   SV+  +A   V+G+ L
Subjt:  IDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAPII--DGNVGLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKALVDGVHL

Query:  ALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCP
        A   G+ P+  ETDS  ++NL S   +  +E   ++   K          F    REGN+ AHML   A   +   +W+ED P
Subjt:  ALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCP

A0A6J5XES2 Uncharacterized protein1.8e-1531.25Show/hide
Query:  SNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAPIIDGNV--GLGMIIRNHKGETMAAVECYRKLRCS--VEWTKAKALVDGVHLAL
        + F  E+S+A    H+S  R + +  V S VW  P    +K+ +D  I  G+   G+G+++RN KGE MAA  C R L+ S     T+  A ++G+  A+
Subjt:  SNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAPIIDGNV--GLGMIIRNHKGETMAAVECYRKLRCS--VEWTKAKALVDGVHLAL

Query:  DAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGILAQEM
        D G      E D+Q   N +   ++     APLI+ +  L           TPR GN+VAH L   A        W+E+ P W   +L  ++
Subjt:  DAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGILAQEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G33160.1 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein1.2e-0624.56Show/hide
Query:  EDPIDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAPIIDGNV--GLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKALVDG
        E  +  A   + E++EA TPSHI+   +    ++P+  W  P     K N+D   I+GN+    G I+R+H G    A +       +    + +AL+  
Subjt:  EDPIDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAPIIDGNV--GLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKALVDG

Query:  VHLALDAGIFPIWTETDSQIVWNLMSDRDQH---FNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHML
        +      G   I  E D++ +++L++    H   FN I  ++    + + +     F  T R+ N+ A +L
Subjt:  VHLALDAGIFPIWTETDSQIVWNLMSDRDQH---FNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHML


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAACACTCCACGCGTTATGGGAGTGAAGAAGATCCGATTGACTGGGCTTCAAACTTCATTATGGAATATAGCGAGGCCCAAACTCCGAGCCACATTAGT
AAGGAAAGATCGAGGCGTGCAGATAATGTCCCTTCCACTGTTTGGACTTCTCCTCCTATCAACCAGTTCAAGCTGAATATAGATGCACCAATCATAGACGGGAAC
GTGGGTTTGGGAATGATCATTCGAAATCATAAAGGAGAGACGATGGCAGCAGTAGAGTGTTATAGGAAATTAAGATGCTCAGTTGAATGGACAAAAGCAAAGGCG
CTTGTAGATGGTGTCCACCTAGCTCTTGATGCAGGCATATTTCCAATATGGACAGAAACAGATTCACAGATTGTATGGAATCTTATGAGCGACCGGGATCAACAT
TTCAACGAGATTGCTCCTCTTATTCAACACCTAAAGCAATTACAGCTTTCCCACCATATTAGGGGCTTCATGTTAACGCCTAGGGAGGGAAACAGAGTAGCACAT
ATGTTGGTCGTTCATGCTCGCACCACCAAACATGACGAGGTTTGGTTAGAAGATTGTCCTCCATGGGCTCATGGCATCCTTGCTCAAGAGATGCCAACCACAGTT
GTCTCACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACAACACTCCACGCGTTATGGGAGTGAAGAAGATCCGATTGACTGGGCTTCAAACTTCATTATGGAATATAGCGAGGCCCAAACTCCGAGCCACATTAGT
AAGGAAAGATCGAGGCGTGCAGATAATGTCCCTTCCACTGTTTGGACTTCTCCTCCTATCAACCAGTTCAAGCTGAATATAGATGCACCAATCATAGACGGGAAC
GTGGGTTTGGGAATGATCATTCGAAATCATAAAGGAGAGACGATGGCAGCAGTAGAGTGTTATAGGAAATTAAGATGCTCAGTTGAATGGACAAAAGCAAAGGCG
CTTGTAGATGGTGTCCACCTAGCTCTTGATGCAGGCATATTTCCAATATGGACAGAAACAGATTCACAGATTGTATGGAATCTTATGAGCGACCGGGATCAACAT
TTCAACGAGATTGCTCCTCTTATTCAACACCTAAAGCAATTACAGCTTTCCCACCATATTAGGGGCTTCATGTTAACGCCTAGGGAGGGAAACAGAGTAGCACAT
ATGTTGGTCGTTCATGCTCGCACCACCAAACATGACGAGGTTTGGTTAGAAGATTGTCCTCCATGGGCTCATGGCATCCTTGCTCAAGAGATGCCAACCACAGTT
GTCTCACATTAG
Protein sequenceShow/hide protein sequence
MKQHSTRYGSEEDPIDWASNFIMEYSEAQTPSHISKERSRRADNVPSTVWTSPPINQFKLNIDAPIIDGNVGLGMIIRNHKGETMAAVECYRKLRCSVEWTKAKA
LVDGVHLALDAGIFPIWTETDSQIVWNLMSDRDQHFNEIAPLIQHLKQLQLSHHIRGFMLTPREGNRVAHMLVVHARTTKHDEVWLEDCPPWAHGILAQEMPTTV
VSH