; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy01g008460 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g008460
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr01:19713129..19713656
RNA-Seq ExpressionLcy01g008460
SyntenyLcy01g008460
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_012836341.1 PREDICTED: uncharacterized protein LOC105956976 [Erythranthe guttata]5.6e-3343.1Show/hide
Query:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM
        DD G+WR ++R+I ++  +YF++LF S+ P+EQ I++V+  V+N I  +  Q L  P++ DE+  A+  ++P K+P  DG    FY  YW I+G + +  
Subjt:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM

Query:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLD------KSSLLPKQ
         L  LN +     +N T IVLIPKVK P+K+ DYRPISLCNV YK  AK +ANR K VL+      +S+ +PK+
Subjt:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLD------KSSLLPKQ

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]1.5e-3345.91Show/hide
Query:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM
        D+ G W +NE  IA+ A+ YF  ++ SS P++  IE+V + +  ++ ++  ++L + ++K+E+ VA+K I P+KAP  DG  A F+Q YW IVG    +M
Subjt:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM

Query:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL
         L VLN N  I  +NKT I LIPK  +PK+M D+RPISLCNV YK+I+K +ANR K +L
Subjt:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]7.9e-3543.43Show/hide
Query:  MDDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETIN
        MD++G W+++   IA+VA+ YF+ ++ SS P    I +V+D +   + ++   +L Q ++++EIE A+  + P+KAP  DG  A F+Q YW+IVG + + 
Subjt:  MDDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETIN

Query:  MCLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDKSSLLPKQPLFLVG
        M L VLN N  +  INKT I L+PK+K+P KM D+RPISLCNV YK+I+K +ANR K +L +  +   Q  FL G
Subjt:  MCLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDKSSLLPKQPLFLVG

XP_023912601.1 uncharacterized protein LOC112024185 [Quercus suber]1.6e-3244.03Show/hide
Query:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM
        ++ G+W +++  I   AL YF+ ++ SS+P    I +VI+ +  R+ D+    L + ++ +E+  A+K + P+KAPR DG  A F+ +YWDIVG    NM
Subjt:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM

Query:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL
         L VLN N  ++ INKT I LIPK   P +M ++RPISLCN +YKII+K +ANRFK +L
Subjt:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL

XP_030939839.1 uncharacterized protein LOC115964720 [Quercus lobata]2.1e-3247.8Show/hide
Query:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM
        DD+G W +    IA VA+ YF+ ++ SS P   + + V   +  R+ D+  + L + +SKDEI +A+K + P+KAP  DG  A F+  YWDIVG    NM
Subjt:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM

Query:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL
         L VLN N  I  +NKT I LIPK K P +M D+RPISL NV+YKIIAK ++NR K VL
Subjt:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL

TrEMBL top hitse value%identityAlignment
A0A2N9GPZ7 Reverse transcriptase domain-containing protein1.2e-3345.28Show/hide
Query:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM
        D  GVW+  + +IA +A+DYF+ +F SS P+ ++I  V+  +++ + +     L+  ++KDE+ +A+K + P+KAP  DG  A FYQ+YWDIVG E    
Subjt:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM

Query:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL
         L +L+    +  IN T I LIPKVK+P+ + D+RPISLCNV YKI++K +ANR KKVL
Subjt:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL

A0A2N9IPS8 Reverse transcriptase domain-containing protein1.2e-3345.28Show/hide
Query:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM
        D  GVW+  + +IA +A+DYF+ +F SS P+ ++I  V+  +++ + +     L+  ++KDE+ +A+K + P+KAP  DG  A FYQ+YWDIVG E    
Subjt:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM

Query:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL
         L +L+    +  IN T I LIPKVK+P+ + D+RPISLCNV YKI++K +ANR KKVL
Subjt:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL

A0A803NFM8 Uncharacterized protein1.6e-3346.25Show/hide
Query:  MDDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETIN
        ++D GV   ++ ++ +V   Y+  LF S   N +A++ V+D +   I D+  Q+L  P++ DE+  A+KS+SP K+P  DG  A FYQ+YW+IVG     
Subjt:  MDDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETIN

Query:  MCLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL
        + L VLNE  D+S +NK+ I L+PKV +P  M DYRPISLCNV YK+I+KTI  RF+KVL
Subjt:  MCLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL

A0A803QCG6 Uncharacterized protein1.8e-3246.54Show/hide
Query:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM
        +D G+    + ++ RV  +Y+  LF S   N  A+  V+D +   I     Q+L +P++ DEI  A++S+SP K+P  DG  A FYQ+YW+IVG+    +
Subjt:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM

Query:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL
         L VLNE  D+S +NK+ I LIPKV +P  M DYRPISLCNV YK+I+KTI  RF+KVL
Subjt:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL

A0A803QP43 Uncharacterized protein8.5e-3546.88Show/hide
Query:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM
        DD+  W+ NE +I  +A+ YFK+LF  +       E +  CV NR+       L +P+++DE++ +M  I P KAP  DG    F+Q  WD VG+E IN 
Subjt:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINM

Query:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLD
        CL +LN NAD SPIN+T I L+PKV  P KM ++RPISLCNV YK+++K +ANR KK L+
Subjt:  CLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLD

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein3.3e-1227.61Show/hide
Query:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDC-VQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETIN
        +D G    +  EI     +Y+K L+ +   N + ++  +D     R+  +  ++L +P +  EI   + S+   K+P  DG  A FYQ Y + +    + 
Subjt:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDC-VQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETIN

Query:  MCLQVLNENADISPINKTAIVLIPKV-KDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDK
        +   +  E    +   + +I+LIPK  +D  K +++RPISL N+  KI+ K +ANR ++ + K
Subjt:  MCLQVLNENADISPINKTAIVLIPKV-KDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDK

P08548 LINE-1 reverse transcriptase homolog1.4e-1328.95Show/hide
Query:  EIARVALDYFKELFDSSTPNEQAIEKVID-CVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENAD
        EI ++  +Y+K+L+     N + I++ ++ C   R+  +  + L +P S  EI   ++++   K+P  DG  + FYQ++ + +    +N+   +  E   
Subjt:  EIARVALDYFKELFDSSTPNEQAIEKVID-CVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENAD

Query:  ISPINKTAIVLIPKV-KDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDK
         +   +  I LIPK  KDP + ++YRPISL N+  KI+ K + NR ++ + K
Subjt:  ISPINKTAIVLIPKV-KDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDK

P11369 LINE-1 retrotransposable element ORF2 protein6.7e-1328.98Show/hide
Query:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQ-NRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETIN
        ++ G    +  EI      ++K L+ +   N   ++K +D  Q  ++       L  P S  EIE  + S+   K+P  DG  A FYQ++ + +      
Subjt:  DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQ-NRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETIN

Query:  MCLQVLNENADISPINKTAIVLIPK-VKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDKSSLLPKQPLFLVG
        +  ++  E    +   +  I LIPK  KDP K++++RPISL N+  KI+ K +ANR ++ + K+ + P Q  F+ G
Subjt:  MCLQVLNENADISPINKTAIVLIPK-VKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDKSSLLPKQPLFLVG

P14381 Transposon TX1 uncharacterized 149 kDa protein1.0e-1326.7Show/hide
Query:  DSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMC
        + G   E+   I   A  +++ LF     +  A E++ D +   + ++  + LE P + DE+  A++ +  +K+P LDG    F+Q +WD +G +   + 
Subjt:  DSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMC

Query:  LQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL------DKSSLLPKQPLF
         +   +        +  + L+PK  D + ++++RP+SL +  YKI+AK I+ R K VL      D+S  +P + +F
Subjt:  LQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL------DKSSLLPKQPLF

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.7e-1129.73Show/hide
Query:  DSGVWRENEREIARVALDYFKELF--DSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETIN
        D  V  EN  ++  + + Y+  L   DS      +++++ D    R  D     L    S  EI  A+ ++  +KAP  D   A F+   W +V + TI 
Subjt:  DSGVWRENEREIARVALDYFKELF--DSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETIN

Query:  MCLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKII
           +       +   N TAI LIPKV    ++  +RP+S C V YKII
Subjt:  MCLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACAGTGGGGTGTGGAGGGAGAATGAAAGGGAGATCGCTCGGGTGGCTTTAGACTACTTCAAGGAGCTTTTTGACTCTTCTACTCCGAATGAGCAGGCT
ATCGAGAAAGTGATAGATTGTGTGCAAAATAGAATCCCTGATCAGACTTGTCAAGCCCTTGAGCAACCTTACTCTAAAGATGAGATCGAGGTTGCTATGAAGAGT
ATTAGCCCTAGTAAGGCTCCGAGGTTGGATGGAACACACGCTAGCTTCTACCAATCCTACTGGGATATAGTGGGAGAAGAAACCATCAACATGTGCCTCCAAGTG
CTAAATGAGAACGCGGACATCTCCCCTATTAACAAAACAGCCATTGTCCTCATTCCCAAGGTTAAGGATCCAAAGAAGATGCAAGACTACAGACCGATTAGCCTC
TGCAATGTCAGTTATAAAATAATAGCAAAAACGATCGCTAACCGTTTCAAAAAAGTCCTAGACAAATCATCTCTCCTTCCCAAGCAGCCTTTGTTCCTGGTAGGC
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGACAGTGGGGTGTGGAGGGAGAATGAAAGGGAGATCGCTCGGGTGGCTTTAGACTACTTCAAGGAGCTTTTTGACTCTTCTACTCCGAATGAGCAGGCT
ATCGAGAAAGTGATAGATTGTGTGCAAAATAGAATCCCTGATCAGACTTGTCAAGCCCTTGAGCAACCTTACTCTAAAGATGAGATCGAGGTTGCTATGAAGAGT
ATTAGCCCTAGTAAGGCTCCGAGGTTGGATGGAACACACGCTAGCTTCTACCAATCCTACTGGGATATAGTGGGAGAAGAAACCATCAACATGTGCCTCCAAGTG
CTAAATGAGAACGCGGACATCTCCCCTATTAACAAAACAGCCATTGTCCTCATTCCCAAGGTTAAGGATCCAAAGAAGATGCAAGACTACAGACCGATTAGCCTC
TGCAATGTCAGTTATAAAATAATAGCAAAAACGATCGCTAACCGTTTCAAAAAAGTCCTAGACAAATCATCTCTCCTTCCCAAGCAGCCTTTGTTCCTGGTAGGC
TGA
Protein sequenceShow/hide protein sequence
MDDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQV
LNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDKSSLLPKQPLFLVG