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Lcy01g009140 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g009140
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionkinetochore protein SPC24 homolog
Genome locationChr01:25624909..25626194
RNA-Seq ExpressionLcy01g009140
SyntenyLcy01g009140
Gene Ontology termsGO:0051983 - regulation of chromosome segregation (biological process)
InterPro domainsIPR044951 - Kinetochore protein SPC24-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603567.1 Kinetochore protein SPC24-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3982.52Show/hide
Query:  MVQLFFFTTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMI
        M+ L F  T++T+EIN+LDRQRISVQERKQAMKKLE+QELR QRKLSMYASVTDIIPNMDDQ+KISGHIVDRNKRVVQ+FE DPT +S+FD CNGIWNMI
Subjt:  MVQLFFFTTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMI

Query:  NSP
        NSP
Subjt:  NSP

XP_008464222.1 PREDICTED: uncharacterized protein LOC103502153 [Cucumis melo]1.9e-3990.43Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP
        LVTNEINEL+RQR+SVQERKQAMKKLE+QEL AQRKLSMYASVTDIIPNMDDQ+KISGHIVDRNKRVVQKFE DPTK+S+FDTCNG+WNMINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP

XP_022144075.1 uncharacterized protein LOC111013852 isoform X2 [Momordica charantia]2.8e-3891.49Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP
        LVT+EINELD QRISVQERKQAMKKLE+QELRAQRKLSMYASVTDIIPNMDDQ+KISGHIVDRNKRVVQKFELDPTK SAFD CN IW+MINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP

XP_022966574.1 uncharacterized protein LOC111466216 [Cucurbita maxima]2.8e-3890.43Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP
        LVTN+INELDRQRISVQERKQA KKLE+QELRAQRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTK S+FD CN IWNMINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP

XP_023518318.1 uncharacterized protein LOC111781837 [Cucurbita pepo subsp. pepo]5.7e-3991.49Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP
        LVTN+INELDRQRISVQERKQA KKLE+QELRAQRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTKMS+FD CN IWNMINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP

TrEMBL top hitse value%identityAlignment
A0A0A0KXM7 Uncharacterized protein1.2e-3983.33Show/hide
Query:  VQLFFFTTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMIN
        ++L FF TLVTNEINEL+ +R+SVQERKQAMKKLE+QEL AQRKLSMYASVTDIIPNM+DQ+KISGHIVDRNKRVVQKFE DP K+S+FDTCNG+WNMIN
Subjt:  VQLFFFTTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMIN

Query:  SP
        SP
Subjt:  SP

A0A1S3CKZ4 uncharacterized protein LOC1035021539.4e-4090.43Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP
        LVTNEINEL+RQR+SVQERKQAMKKLE+QEL AQRKLSMYASVTDIIPNMDDQ+KISGHIVDRNKRVVQKFE DPTK+S+FDTCNG+WNMINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP

A0A6J1CQL9 uncharacterized protein LOC111013852 isoform X21.4e-3891.49Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP
        LVT+EINELD QRISVQERKQAMKKLE+QELRAQRKLSMYASVTDIIPNMDDQ+KISGHIVDRNKRVVQKFELDPTK SAFD CN IW+MINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP

A0A6J1CR83 uncharacterized protein LOC111013852 isoform X11.4e-3891.49Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP
        LVT+EINELD QRISVQERKQAMKKLE+QELRAQRKLSMYASVTDIIPNMDDQ+KISGHIVDRNKRVVQKFELDPTK SAFD CN IW+MINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP

A0A6J1HU69 uncharacterized protein LOC1114662161.4e-3890.43Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP
        LVTN+INELDRQRISVQERKQA KKLE+QELRAQRKLSMYASVTDIIPNMDD +KISGHIVDRNKRVVQKFELDPTK S+FD CN IWNMINSP
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMINSP

SwissProt top hitse value%identityAlignment
Q67XT3 Kinetochore protein SPC24 homolog1.7e-2251.09Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMIN
        LV +E+ +L+ Q  S+ E KQ+ K+  + +LRA++KLSMYASVT++IP++DD +KISG++VDR KR+++KF+ +  KM+A++TCN IW++IN
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMIN

Arabidopsis top hitse value%identityAlignment
AT3G08880.1 unknown protein1.2e-2351.09Show/hide
Query:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMIN
        LV +E+ +L+ Q  S+ E KQ+ K+  + +LRA++KLSMYASVT++IP++DD +KISG++VDR KR+++KF+ +  KM+A++TCN IW++IN
Subjt:  LVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWNMIN

AT5G01570.1 unknown protein1.3e-1243.9Show/hide
Query:  EINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTK-MSAFDTCN
        ++ E  R     +E + A+K+ ++ +LR + KL MYASVT +IPN+DD  K SG++V R+KR++ KFE D  K  S ++TCN
Subjt:  EINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTK-MSAFDTCN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTGCCTGTCACATGTATGGTGCAACTGTTTTTCTTCACCACACTTGTCACCAATGAGATTAATGAGCTAGACCGACAGAGAATTTCTGTTCAAGAAAGG
AAGCAGGCGATGAAGAAACTTGAGAAACAAGAACTTAGGGCGCAGAGGAAGCTTTCGATGTATGCTTCGGTCACTGATATAATACCAAACATGGACGATCAGGCT
AAAATTTCTGGCCATATTGTGGATAGAAATAAACGGGTGGTACAGAAGTTTGAATTGGACCCGACTAAGATGTCTGCATTTGATACATGCAACGGCATTTGGAAT
ATGATTAATTCCCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTATTTGCCTGTCACATGTATGGTGCAACTGTTTTTCTTCACCACACTTGTCACCAATGAGATTAATGAGCTAGACCGACAGAGAATTTCTGTTCAAGAAAGG
AAGCAGGCGATGAAGAAACTTGAGAAACAAGAACTTAGGGCGCAGAGGAAGCTTTCGATGTATGCTTCGGTCACTGATATAATACCAAACATGGACGATCAGGCT
AAAATTTCTGGCCATATTGTGGATAGAAATAAACGGGTGGTACAGAAGTTTGAATTGGACCCGACTAAGATGTCTGCATTTGATACATGCAACGGCATTTGGAAT
ATGATTAATTCCCCATAG
Protein sequenceShow/hide protein sequence
MYLPVTCMVQLFFFTTLVTNEINELDRQRISVQERKQAMKKLEKQELRAQRKLSMYASVTDIIPNMDDQAKISGHIVDRNKRVVQKFELDPTKMSAFDTCNGIWN
MINSP