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Lcy01g009660 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g009660
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr01:28390194..28390616
RNA-Seq ExpressionLcy01g009660
SyntenyLcy01g009660
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
POO04030.1 Endonuclease/exonuclease/phosphatase [Trema orientale]1.1e-1535.97Show/hide
Query:  SCLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKE--LDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFY
        +C   L +W++ +    LK  + + ++ ++ ++  +DT  +H   + ++E  LD LL  EEIYWK RSR  W+  GD NT++FHSKA++RRK N IK   
Subjt:  SCLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKE--LDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFY

Query:  TSVGVWVNDEEDMGKEASRYFSNLLSSSKPNIKAIDKTL
           G+ VN +ED+      YF N+ +S   N +A+++ L
Subjt:  TSVGVWVNDEEDMGKEASRYFSNLLSSSKPNIKAIDKTL

TXG53039.1 hypothetical protein EZV62_022208 [Acer yangbiense]2.4e-1840.74Show/hide
Query:  CLSKLNRWNRVRLDDSL-KATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTS
        C  +L RW   +  + L K  +K+ E +++S S S  ++   ++   EKELDSLL EEE YWK RSRE WL  GD+NT +FHS+AS  R +N+I+G Y  
Subjt:  CLSKLNRWNRVRLDDSL-KATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTS

Query:  VGVWVNDEEDMGKEASRYFSNLLSSSKPNIKAIDK
        +G W +D++ +    S YF  +  SS P++  +D+
Subjt:  VGVWVNDEEDMGKEASRYFSNLLSSSKPNIKAIDK

XP_023906330.1 uncharacterized protein LOC112018052 [Quercus suber]3.8e-1634.85Show/hide
Query:  LNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTSVGVWV
        L +W +V   ++ KA++K K  E++ +++ ND     ++   + E++++L +EE+ W+ RSR  WL  GD+NT++FH +A+QR++RN I G + +VG W 
Subjt:  LNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTSVGVWV

Query:  NDEEDMGKEASRYFSNLLSSSKPNIKAIDKTL
         DE+ +   A  YF +L +SS+P    + + L
Subjt:  NDEEDMGKEASRYFSNLLSSSKPNIKAIDKTL

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]7.7e-1738.03Show/hide
Query:  SCLSKLNRWNRVRLD---DSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGF
        +CL++L  W+R   D   + LK  +K+K  E+K      +   + K    E++++ +L +EE+YWK RSR +WL  GD+NT++FHSKAS R+++N I G 
Subjt:  SCLSKLNRWNRVRLD---DSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGF

Query:  YTSVGVWVNDEEDMGKEASRYFSNLLSSSKPNIKAIDKTLRG
             VWV+D E + K+   YF++L ++S P+ K I+  L G
Subjt:  YTSVGVWVNDEEDMGKEASRYFSNLLSSSKPNIKAIDKTLRG

XP_030924668.1 uncharacterized protein LOC115951644 [Quercus lobata]1.9e-1536.36Show/hide
Query:  MSCLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDH--KLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGF
        ++C S L  WN+ ++   ++ ++K+K E++K     N  ++ +  ++     E+  L  +EE  WK RSR  WL  GDRNT++FH +A+QR +RN+I G 
Subjt:  MSCLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDH--KLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGF

Query:  YTSVGVWVNDEEDMGKEASRYFSNLLSSSKPN
            G WV DE+ MGK    YF  + +SS P+
Subjt:  YTSVGVWVNDEEDMGKEASRYFSNLLSSSKPN

TrEMBL top hitse value%identityAlignment
A0A2N9F7A6 Uncharacterized protein9.9e-1836.23Show/hide
Query:  CLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTSV
        C   L  W++ R   S+ A+IK K E+++  +  +++    +L   + EL+ LLE+EEI+W+ RSR  W+N GD+NT++FH+  +QRR+ N+IKG Y   
Subjt:  CLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTSV

Query:  GVWVNDEEDMGKEASRYFSNLLSSSKPNIKAIDKTLRG
         +W  ++  +   A  YF N+ +SS+P +  I+  L G
Subjt:  GVWVNDEEDMGKEASRYFSNLLSSSKPNIKAIDKTLRG

A0A2N9GF83 CCHC-type domain-containing protein8.4e-1736.96Show/hide
Query:  CLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTSV
        C   L  W+++R   SL  +IK K  +++S+ A +      ++   + +L++LLE+EE+YW+ RSR  W+  GD+NT++FH++ SQRR+ N +KG    V
Subjt:  CLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTSV

Query:  GVWVNDEEDMGKEASRYFSNLLSSSKPNIKAIDKTLRG
        GVW  D+  +   A  YF N+ SSS P  + I  ++ G
Subjt:  GVWVNDEEDMGKEASRYFSNLLSSSKPNIKAIDKTLRG

A0A5C7H8J3 Uncharacterized protein1.2e-1840.74Show/hide
Query:  CLSKLNRWNRVRLDDSL-KATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTS
        C  +L RW   +  + L K  +K+ E +++S S S  ++   ++   EKELDSLL EEE YWK RSRE WL  GD+NT +FHS+AS  R +N+I+G Y  
Subjt:  CLSKLNRWNRVRLDDSL-KATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTS

Query:  VGVWVNDEEDMGKEASRYFSNLLSSSKPNIKAIDK
        +G W +D++ +    S YF  +  SS P++  +D+
Subjt:  VGVWVNDEEDMGKEASRYFSNLLSSSKPNIKAIDK

A0A803P3V6 Uncharacterized protein8.4e-1739.85Show/hide
Query:  CLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTSV
        C  KLN WN+ +  + L+A  K+ +E++K +S+S+           EKEL+    +EEI WK RSR  WL  GDRNT++FH KASQR+K+N IKG +   
Subjt:  CLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTSV

Query:  GVWVNDEEDMGKEASRYFSNLLSSSKPNIKAID
          W     ++ +    Y+SNL +SS+P++   D
Subjt:  GVWVNDEEDMGKEASRYFSNLLSSSKPNIKAID

A0A803P941 Uncharacterized protein4.9e-1739.85Show/hide
Query:  CLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTSV
        C   L  WN+ +  + LKA  K  +E++K +S+S       K    E++L++  ++EE+ WK RSR  WL  GDRNT++FH KASQR+K+N I G +   
Subjt:  CLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTSV

Query:  GVWVNDEEDMGKEASRYFSNLLSSSKPNIKAID
          W N ++++ +   RY+S L SSSKPN   I+
Subjt:  GVWVNDEEDMGKEASRYFSNLLSSSKPNIKAID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTGTTTGAGTAAGCTTAATAGGTGGAATAGGGTGAGATTGGATGACTCTCTAAAAGCTACCATCAAGAGAAAAGAAGAGGAGATTAAGAGTATAAGCGCCAGTAA
TGACACCTTCAAGGATCATAAACTTGCAGTGGCTGAGAAAGAGCTTGACTCTCTTCTTGAGGAAGAAGAGATCTACTGGAAATTCAGGTCTCGAGAAGAGTGGCTGAATT
GGGGTGACCGGAACACGGAGTGGTTTCACTCAAAGGCCAGTCAGAGGAGAAAACGTAACATTATCAAAGGTTTCTATACTAGTGTTGGAGTATGGGTCAATGATGAAGAA
GATATGGGCAAAGAAGCATCAAGATACTTCTCAAATCTTTTGTCATCCTCAAAACCCAACATAAAAGCTATAGACAAAACGCTGAGGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTGTTTGAGTAAGCTTAATAGGTGGAATAGGGTGAGATTGGATGACTCTCTAAAAGCTACCATCAAGAGAAAAGAAGAGGAGATTAAGAGTATAAGCGCCAGTAA
TGACACCTTCAAGGATCATAAACTTGCAGTGGCTGAGAAAGAGCTTGACTCTCTTCTTGAGGAAGAAGAGATCTACTGGAAATTCAGGTCTCGAGAAGAGTGGCTGAATT
GGGGTGACCGGAACACGGAGTGGTTTCACTCAAAGGCCAGTCAGAGGAGAAAACGTAACATTATCAAAGGTTTCTATACTAGTGTTGGAGTATGGGTCAATGATGAAGAA
GATATGGGCAAAGAAGCATCAAGATACTTCTCAAATCTTTTGTCATCCTCAAAACCCAACATAAAAGCTATAGACAAAACGCTGAGGGGATGA
Protein sequenceShow/hide protein sequence
MSCLSKLNRWNRVRLDDSLKATIKRKEEEIKSISASNDTFKDHKLAVAEKELDSLLEEEEIYWKFRSREEWLNWGDRNTEWFHSKASQRRKRNIIKGFYTSVGVWVNDEE
DMGKEASRYFSNLLSSSKPNIKAIDKTLRG