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Lcy01g010180 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g010180
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNA-directed DNA polymerase reverse transcriptase family protein
Genome locationChr01:29359615..29359977
RNA-Seq ExpressionLcy01g010180
SyntenyLcy01g010180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]1.2e-2158.33Show/hide
Query:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIP
        MLAK SW+++K P SL+ +VLRGKYFK G+F++A LG+NPS  WRSI+WG ++F KG RW+IGNG  VII   PWI   G+ +P
Subjt:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIP

XP_022145149.1 uncharacterized protein LOC111014663 [Momordica charantia]1.1e-2242.5Show/hide
Query:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII
        MLAK SWR+L+ P S + + LRGKYF+TG F+ A LGN+PS  WRSI+W  ++F KGY+W++GNG  + I    WI       P+    ++   LV+ ++
Subjt:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII

Query:  NEHGEWKEKEVLENIEVSNA
         E G W E ++ +N  +S A
Subjt:  NEHGEWKEKEVLENIEVSNA

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]7.1e-2748.33Show/hide
Query:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII
        MLAK SWR+L+ P SL+ + LRGKYFKTG F+ A LG  PS  WRSI+WG D+F+KGYRWK+GNG  + +   PW+P  GN  P+     ++   V+ ++
Subjt:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII

Query:  NEHGEWKEKEVLENIEVSNA
           G W E +V E+  VS A
Subjt:  NEHGEWKEKEVLENIEVSNA

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]2.9e-2040Show/hide
Query:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII
        ++AK  WR+++ P SL+ +VL+ +YFK   F++A LG+ PS  WRSIVWG  +  KG RW+IGNG+ V++    WIP P    PI          V+E+I
Subjt:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII

Query:  NEHGEWKEKEVLENIEVSNA
        +E  +W+E  +L++    +A
Subjt:  NEHGEWKEKEVLENIEVSNA

XP_024043257.1 uncharacterized protein LOC112099952 [Citrus clementina]2.9e-2037.5Show/hide
Query:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII
        ++AK  WR++++P SL+ +VL+ +YFK G  ++A LG+ PS  WRS++WG  + ++G RW+IGNG  V + +  WIP P    PI          V+E+I
Subjt:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII

Query:  NEHGEWKEKEVLENIEVSNA
        +    WKEK + ++    +A
Subjt:  NEHGEWKEKEVLENIEVSNA

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein1.6e-2142.5Show/hide
Query:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII
        ++AK SWR++K P+SLM ++L+ KYFK  DF+ A LG+ PS  WRSI+WG  +   G RW+IG G RV I +  WIP P    PI          V+E+I
Subjt:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII

Query:  NEHGEWKEKEVLENIEVSNA
        +E+ +WKE  + ++    +A
Subjt:  NEHGEWKEKEVLENIEVSNA

A0A6J1CUD6 uncharacterized protein LOC1110146635.1e-2342.5Show/hide
Query:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII
        MLAK SWR+L+ P S + + LRGKYF+TG F+ A LGN+PS  WRSI+W  ++F KGY+W++GNG  + I    WI       P+    ++   LV+ ++
Subjt:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII

Query:  NEHGEWKEKEVLENIEVSNA
         E G W E ++ +N  +S A
Subjt:  NEHGEWKEKEVLENIEVSNA

A0A6J1CV63 uncharacterized protein LOC1110146625.7e-2258.33Show/hide
Query:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIP
        MLAK SW+++K P SL+ +VLRGKYFK G+F++A LG+NPS  WRSI+WG ++F KG RW+IGNG  VII   PWI   G+ +P
Subjt:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIP

A0A6J1DRA0 uncharacterized protein LOC1110224233.4e-2748.33Show/hide
Query:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII
        MLAK SWR+L+ P SL+ + LRGKYFKTG F+ A LG  PS  WRSI+WG D+F+KGYRWK+GNG  + +   PW+P  GN  P+     ++   V+ ++
Subjt:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII

Query:  NEHGEWKEKEVLENIEVSNA
           G W E +V E+  VS A
Subjt:  NEHGEWKEKEVLENIEVSNA

A0A803Q6Z2 Uncharacterized protein4.1e-2044.34Show/hide
Query:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII
        +LAK +WR+L+ P SL+ +VL+ +YF TG F+ A  G  PSLTW+SIVWG ++  KG RW+IG+G  V     PWIP P N  P+L     +   V++ I
Subjt:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEII

Query:  NEHGEW
            +W
Subjt:  NEHGEW

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003104.5e-0833.33Show/hide
Query:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNG-------RRVIIDQVPWIP
        +LAK S+R++  P +L+ ++LR +YF     +   +G  PS  WRSI+ G ++  +G    IG+G        R I+D+ P  P
Subjt:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNG-------RRVIIDQVPWIP

Arabidopsis top hitse value%identityAlignment
ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.2e-0933.33Show/hide
Query:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNG-------RRVIIDQVPWIP
        +LAK S+R++  P +L+ ++LR +YF     +   +G  PS  WRSI+ G ++  +G    IG+G        R I+D+ P  P
Subjt:  MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNG-------RRVIIDQVPWIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGCAAAATCTAGCTGGAGACTTCTCAAAGCCCCTCAAAGCCTAATGGGTCAAGTCCTTAGAGGGAAATACTTCAAGACTGGAGATTTTATTTCAGCCCCTTTGGG
TAACAATCCTTCCCTAACCTGGAGAAGCATTGTTTGGGGGTGGGACATTTTCAGAAAAGGCTATAGGTGGAAAATTGGGAACGGAAGACGCGTTATCATAGACCAAGTCC
CGTGGATTCCATCCCCGGGAAATGAAATCCCAATCCTTATTAAAGACACCCTGAAGGGCAAATTAGTCTCTGAGATTATCAATGAGCATGGAGAATGGAAGGAAAAGGAA
GTCTTGGAAAACATTGAAGTCTCTAATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTGCAAAATCTAGCTGGAGACTTCTCAAAGCCCCTCAAAGCCTAATGGGTCAAGTCCTTAGAGGGAAATACTTCAAGACTGGAGATTTTATTTCAGCCCCTTTGGG
TAACAATCCTTCCCTAACCTGGAGAAGCATTGTTTGGGGGTGGGACATTTTCAGAAAAGGCTATAGGTGGAAAATTGGGAACGGAAGACGCGTTATCATAGACCAAGTCC
CGTGGATTCCATCCCCGGGAAATGAAATCCCAATCCTTATTAAAGACACCCTGAAGGGCAAATTAGTCTCTGAGATTATCAATGAGCATGGAGAATGGAAGGAAAAGGAA
GTCTTGGAAAACATTGAAGTCTCTAATGCTTGA
Protein sequenceShow/hide protein sequence
MLAKSSWRLLKAPQSLMGQVLRGKYFKTGDFISAPLGNNPSLTWRSIVWGWDIFRKGYRWKIGNGRRVIIDQVPWIPSPGNEIPILIKDTLKGKLVSEIINEHGEWKEKE
VLENIEVSNA