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Lcy01g010380 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g010380
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionATP-dependent DNA helicase
Genome locationChr01:29835449..29836202
RNA-Seq ExpressionLcy01g010380
SyntenyLcy01g010380
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0003678 - DNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR025476 - Helitron helicase-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139753.2 uncharacterized protein LOC101213993 [Cucumis sativus]1.1e-3985.57Show/hide
Query:  MYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREELME
        MYIKLETTRLDFYKT QS IRSELYQGIVD+VNAGETRGDKVGKR+VLPSTFIGGP+ MR RYLDA  LVQH+ K DLFITMTCN++WKEIREELME
Subjt:  MYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREELME

XP_012829391.1 PREDICTED: uncharacterized protein LOC105950571 [Erythranthe guttata]3.4e-3370.59Show/hide
Query:  KYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREEL
        +Y VDMYIKLETTRLD+Y+ +QS++RSELYQGI++ V  GETRG +VGKR+VLP++FIGGPR+MRRRYLDA  LVQ F K DLFITMTCN +WKEI+E L
Subjt:  KYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREEL

Query:  ME
         +
Subjt:  ME

XP_020263362.1 uncharacterized protein LOC109839344 [Asparagus officinalis]1.7e-3271Show/hide
Query:  KYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREEL
        +Y VDMYIKLETTRLD+++  QS IR+EL+QGIVD V AGE +  +VGKRIVLPS+FIGGPR+MRRRYLDA +LVQ F K D+FITMTCN +W+EI EEL
Subjt:  KYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREEL

XP_020266738.1 uncharacterized protein LOC109842248 [Asparagus officinalis]7.5e-3369.31Show/hide
Query:  KYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREEL
        ++ VDMY+KLETTRLDF++  QS+IR+ELYQGIVD V AGETRGD+VG R+VLP +FIGGPR+MRRRY+DA  LVQ + K DLFIT+TCN  W EIR EL
Subjt:  KYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREEL

Query:  M
        +
Subjt:  M

XP_022158322.1 uncharacterized protein LOC111024835 [Momordica charantia]3.0e-4269.17Show/hide
Query:  IITMVATTFRQKKHLMFDNFKTLKTSSTMKIKYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYL
        +I++  T+  ++ + + D  K+      +  +Y VDMYIKLETTRLDFYK  QSHIRSELYQGIVD+VNAGETRGDKVGKR+VLPSTFIGGPR+MRRRYL
Subjt:  IITMVATTFRQKKHLMFDNFKTLKTSSTMKIKYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYL

Query:  DATNLVQHFEKLDLFITMTCNAKWKEIREELME
        DA  LVQHF K DLFITMTCN +WKEIREEL+E
Subjt:  DATNLVQHFEKLDLFITMTCNAKWKEIREELME

TrEMBL top hitse value%identityAlignment
A0A2P5DB44 ATP-dependent DNA helicase2.0e-3162Show/hide
Query:  KYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREEL
        +Y VDMY+K+ET+RLD+++  Q+ I++ELY+GI+D +  GETRG K+G+RI+LPS+F+GGPR+MR+RY+DA  LVQ F K DLF+TMTCN  W+EIREEL
Subjt:  KYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREEL

A0A5A7Q220 DNA helicase homolog3.1e-3269.61Show/hide
Query:  KYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREEL
        +Y VDMYIKLETTRLD+Y+ +QS +R ELYQGI + V +GE RG +VGKRIVLPS+FIGGPR+MRRRYLDA  LVQ F K DLFITMTCN +W+EI+++L
Subjt:  KYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREEL

Query:  ME
         E
Subjt:  ME

A0A5B7A9C3 ATP-dependent DNA helicase5.1e-3566.96Show/hide
Query:  TLKTSSTMKIKYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCN
        TL  +  +  +Y VDMYIKLETTRLD+Y+  QS+IR++LYQGIVD V AGETRG++VG+RIVLP++F+GGPR+MRRRYLDA  LVQ F K DLFITMTCN
Subjt:  TLKTSSTMKIKYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCN

Query:  AKWKEIREELME
          WKE+++EL E
Subjt:  AKWKEIREELME

A0A6J1DWY2 uncharacterized protein LOC1110248351.5e-4269.17Show/hide
Query:  IITMVATTFRQKKHLMFDNFKTLKTSSTMKIKYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYL
        +I++  T+  ++ + + D  K+      +  +Y VDMYIKLETTRLDFYK  QSHIRSELYQGIVD+VNAGETRGDKVGKR+VLPSTFIGGPR+MRRRYL
Subjt:  IITMVATTFRQKKHLMFDNFKTLKTSSTMKIKYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYL

Query:  DATNLVQHFEKLDLFITMTCNAKWKEIREELME
        DA  LVQHF K DLFITMTCN +WKEIREEL+E
Subjt:  DATNLVQHFEKLDLFITMTCNAKWKEIREELME

A0A6P4B6W3 ATP-dependent DNA helicase2.0e-3163.73Show/hide
Query:  KYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREEL
        ++ VDMY+KLET+RLD+++ +Q+ IR+ELYQGI+D V+ GETRG KVG+RI+LPSTFIGGPR+MRR+Y+DA  LVQ F K D+F+TMTCN  W EI++EL
Subjt:  KYGVDMYIKLETTRLDFYKTHQSHIRSELYQGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREEL

Query:  ME
        ++
Subjt:  ME

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCATTCTGGAAAACGACACAGAATTCAACATTATTTTAGTTGTTATGATCCACTTCAATATCCATTACTTTTACCAAATGGAGAGGCAGGTTGGCATCAAG
ACATCAAACAAAAGTCTACGCCAAACCATAATAACAATGGTAGCCACAACATTTCGACAGAAGAAACATCTGATGTTCGACAATTTCAAAACATTGAAGACATCA
TCAACAATGAAAATCAAGTATGGTGTGGATATGTATATAAAGCTTGAAACAACTAGACTTGACTTCTATAAGACTCACCAATCACACATTCGATCGGAGTTGTAT
CAAGGGATTGTTGATATCGTAAATGCAGGAGAAACAAGAGGAGACAAAGTTGGAAAACGTATAGTTCTTCCTTCAACATTTATTGGTGGTCCAAGAGAGATGCGA
CGTCGGTATTTAGATGCTACGAATTTAGTACAACATTTTGAAAAGCTAGATTTATTTATAACAATGACATGCAATGCTAAATGGAAGGAAATAAGGGAAGAGTTA
ATGGAATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGCATTCTGGAAAACGACACAGAATTCAACATTATTTTAGTTGTTATGATCCACTTCAATATCCATTACTTTTACCAAATGGAGAGGCAGGTTGGCATCAAG
ACATCAAACAAAAGTCTACGCCAAACCATAATAACAATGGTAGCCACAACATTTCGACAGAAGAAACATCTGATGTTCGACAATTTCAAAACATTGAAGACATCA
TCAACAATGAAAATCAAGTATGGTGTGGATATGTATATAAAGCTTGAAACAACTAGACTTGACTTCTATAAGACTCACCAATCACACATTCGATCGGAGTTGTAT
CAAGGGATTGTTGATATCGTAAATGCAGGAGAAACAAGAGGAGACAAAGTTGGAAAACGTATAGTTCTTCCTTCAACATTTATTGGTGGTCCAAGAGAGATGCGA
CGTCGGTATTTAGATGCTACGAATTTAGTACAACATTTTGAAAAGCTAGATTTATTTATAACAATGACATGCAATGCTAAATGGAAGGAAATAAGGGAAGAGTTA
ATGGAATGTTAA
Protein sequenceShow/hide protein sequence
MRILENDTEFNIILVVMIHFNIHYFYQMERQVGIKTSNKSLRQTIITMVATTFRQKKHLMFDNFKTLKTSSTMKIKYGVDMYIKLETTRLDFYKTHQSHIRSELY
QGIVDIVNAGETRGDKVGKRIVLPSTFIGGPREMRRRYLDATNLVQHFEKLDLFITMTCNAKWKEIREELMEC