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Lcy01g010460 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g010460
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUPF0481 protein At3g47200-like
Genome locationChr01:30068234..30073247
RNA-Seq ExpressionLcy01g010460
SyntenyLcy01g010460
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131631.1 UPF0481 protein At3g47200-like [Momordica charantia]4.0e-2354.72Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        ++DLI+TE+DV LLVKA IITN I G+ +E+SK+FN+LCKDV++  DFY  N+IS  L K+C   W++W+ASLKRDY ++P T I+ + ATV ILLT +Q
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTVV
         +++V+
Subjt:  VLFTVV

XP_022158989.1 UPF0481 protein At3g47200-like isoform X1 [Momordica charantia]1.2e-2258.49Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        +N LI+ E+DV LLVKA IITN I G+++E+S LFN LCKDV +  D  C N I+EALH+HC ARWNK  ASL+RDY +TP   I+ V A  LILLT LQ
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTVV
         LF+ +
Subjt:  VLFTVV

XP_022158990.1 UPF0481 protein At3g47200-like isoform X2 [Momordica charantia]1.2e-2258.49Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        +N LI+ E+DV LLVKA IITN I G+++E+S LFN LCKDV +  D  C N I+EALH+HC ARWNK  ASL+RDY +TP   I+ V A  LILLT LQ
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTVV
         LF+ +
Subjt:  VLFTVV

XP_022158992.1 UPF0481 protein At3g47200-like isoform X3 [Momordica charantia]1.2e-2258.49Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        +N LI+ E+DV LLVKA IITN I G+++E+S LFN LCKDV +  D  C N I+EALH+HC ARWNK  ASL+RDY +TP   I+ V A  LILLT LQ
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTVV
         LF+ +
Subjt:  VLFTVV

XP_022961913.1 UPF0481 protein At3g47200-like [Cucurbita moschata]3.4e-2258.88Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        M+DLI+TEKDV+LLVKA II N+I GS KE+SKLFN+LCK V    D Y  N IS  L +HCN RWNK KASLK +Y +TP  +++   AT+LI+LT LQ
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTVVP
         +F+V P
Subjt:  VLFTVVP

TrEMBL top hitse value%identityAlignment
A0A6J1BQ17 UPF0481 protein At3g47200-like2.0e-2354.72Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        ++DLI+TE+DV LLVKA IITN I G+ +E+SK+FN+LCKDV++  DFY  N+IS  L K+C   W++W+ASLKRDY ++P T I+ + ATV ILLT +Q
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTVV
         +++V+
Subjt:  VLFTVV

A0A6J1DXD6 UPF0481 protein At3g47200-like isoform X25.7e-2358.49Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        +N LI+ E+DV LLVKA IITN I G+++E+S LFN LCKDV +  D  C N I+EALH+HC ARWNK  ASL+RDY +TP   I+ V A  LILLT LQ
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTVV
         LF+ +
Subjt:  VLFTVV

A0A6J1DYL4 UPF0481 protein At3g47200-like isoform X35.7e-2358.49Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        +N LI+ E+DV LLVKA IITN I G+++E+S LFN LCKDV +  D  C N I+EALH+HC ARWNK  ASL+RDY +TP   I+ V A  LILLT LQ
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTVV
         LF+ +
Subjt:  VLFTVV

A0A6J1E120 UPF0481 protein At3g47200-like isoform X15.7e-2358.49Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        +N LI+ E+DV LLVKA IITN I G+++E+S LFN LCKDV +  D  C N I+EALH+HC ARWNK  ASL+RDY +TP   I+ V A  LILLT LQ
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTVV
         LF+ +
Subjt:  VLFTVV

A0A6J1HD72 UPF0481 protein At3g47200-like1.7e-2258.88Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        M+DLI+TEKDV+LLVKA II N+I GS KE+SKLFN+LCK V    D Y  N IS  L +HCN RWNK KASLK +Y +TP  +++   AT+LI+LT LQ
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTVVP
         +F+V P
Subjt:  VLFTVVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G50120.1 Plant protein of unknown function (DUF247)1.6e-0930.48Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        M++LI++ +DV  L    II + + GS  E++ LFN LC++V  + +    +++S  ++++ + +WN W+A+LK  Y + P  +++   A +L++LT  Q
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTV
          + V
Subjt:  VLFTV

AT3G50140.1 Plant protein of unknown function (DUF247)2.1e-0932.11Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        M++LI++ +D+  L    II + + G+  E++ +FN LC++V  + +    +++S  + ++ N +WN  KA+LK  Y S P    +   A +L+LLT  Q
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTVVPPF
          FT  P F
Subjt:  VLFTVVPPF

AT3G50150.1 Plant protein of unknown function (DUF247)2.3e-0832.38Show/hide
Query:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ
        M++LIN+ +DV  L    II + + GS  E++ LFN LCK+V  +      +++S  ++++ + +WN  KA+L++ Y + P    +   A +L+ LT  Q
Subjt:  MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQ

Query:  VLFTV
          F V
Subjt:  VLFTV

AT4G31980.1 unknown protein5.8e-1238.24Show/hide
Query:  INTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQVLFT
        I +  D DLL+ + II N + G+  ++S LFN + K+V  +  FY S  +SE L  +CN  WN+WKA L+RDY   P  + +   A +L+LLT +Q + +
Subjt:  INTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQVLFT

Query:  VV
        ++
Subjt:  VV

AT5G11290.1 Plant protein of unknown function (DUF247)2.9e-1136.27Show/hide
Query:  INTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQVLFT
        I +  D +L +   II N   G+ +++S+LFN + K+ +    +Y    +   L  HCNA WNKWKA+L+RDY   P +  + V A VL+LLT +Q + +
Subjt:  INTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQVLFT

Query:  VV
        ++
Subjt:  VV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACTTGATAAACACAGAGAAAGATGTGGATTTACTTGTGAAAGCGAAAATCATAACCAACAGTATTTGTGGCAGTCACAAAGAAATTTCAAAACTTTTTAACCA
TCTATGTAAGGATGTTACCATTGAATTTGATTTTTACTGCTCCAACAAAATAAGTGAAGCTTTACATAAGCATTGCAATGCACGATGGAACAAGTGGAAAGCTTCATTGA
AACGTGACTATTGTAGTACTCCAAGGACTCTTATCGCTTCCGTTGTTGCTACCGTCCTCATTCTCCTCACTGCTCTACAAGTCTTATTCACTGTTGTACCACCTTTCAAC
ATTTCGGAAAGTAATTGTTTTTATTTCTCCAGGTATAAACTTATTCGAGTGAATTATATTTTCAGTTTAAGTCAACGAAAAAGGATTCGAACGCTGGAACTTGGCGTCAA
AAGCAATCGGAATGCGTGCCCCCAACCACTGAACCAAACTTCTACCTTTGGAAATAAATCTATCATAGAATATACATATATATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGACTTGATAAACACAGAGAAAGATGTGGATTTACTTGTGAAAGCGAAAATCATAACCAACAGTATTTGTGGCAGTCACAAAGAAATTTCAAAACTTTTTAACCA
TCTATGTAAGGATGTTACCATTGAATTTGATTTTTACTGCTCCAACAAAATAAGTGAAGCTTTACATAAGCATTGCAATGCACGATGGAACAAGTGGAAAGCTTCATTGA
AACGTGACTATTGTAGTACTCCAAGGACTCTTATCGCTTCCGTTGTTGCTACCGTCCTCATTCTCCTCACTGCTCTACAAGTCTTATTCACTGTTGTACCACCTTTCAAC
ATTTCGGAAAGTAATTGTTTTTATTTCTCCAGGTATAAACTTATTCGAGTGAATTATATTTTCAGTTTAAGTCAACGAAAAAGGATTCGAACGCTGGAACTTGGCGTCAA
AAGCAATCGGAATGCGTGCCCCCAACCACTGAACCAAACTTCTACCTTTGGAAATAAATCTATCATAGAATATACATATATATAA
Protein sequenceShow/hide protein sequence
MNDLINTEKDVDLLVKAKIITNSICGSHKEISKLFNHLCKDVTIEFDFYCSNKISEALHKHCNARWNKWKASLKRDYCSTPRTLIASVVATVLILLTALQVLFTVVPPFN
ISESNCFYFSRYKLIRVNYIFSLSQRKRIRTLELGVKSNRNACPQPLNQTSTFGNKSIIEYTYI