; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy01g010930 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g010930
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationChr01:31239754..31245524
RNA-Seq ExpressionLcy01g010930
SyntenyLcy01g010930
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585426.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. sororia]6.3e-8078.4Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +SSR C  ARVW  SS+ LRS N NS  FSSASM+ES ES+SVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKLFLKTSRITNYFCR
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL   +  I   F  
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKLFLKTSRITNYFCR

Query:  DTKKDEGEERFIF
          +++E E  F F
Subjt:  DTKKDEGEERFIF

KAG7020347.1 putative peptidyl-tRNA hydrolase PTRHD1, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +SSR C  ARVW  SS+ LRS N NS  FSSASM+ES ES+SVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

XP_022951520.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita moschata]8.2e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S R C  ARVW  SS+ LRS N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

XP_023002512.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita maxima]2.2e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S+R CS ARVW  SS+ L S N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

XP_023002513.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucurbita maxima]2.2e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S+R CS ARVW  SS+ L S N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

TrEMBL top hitse value%identityAlignment
A0A6J1GHT5 Aminoacyl-tRNA hydrolase4.0e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S R C  ARVW  SS+ LRS N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

A0A6J1GJ11 Aminoacyl-tRNA hydrolase4.0e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S R C  ARVW  SS+ LRS N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

A0A6J1HBR1 Aminoacyl-tRNA hydrolase2.9e-7582.54Show/hide
Query:  MTSVTSASRLTFSIPDSSRF--CSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQG
        M SV SASR TFSI  S++   CSR+RVW SSSLSLRS NRNSN FSS SM+ES ESNS  P DD     E+TADVL+QYVVLRRDLIDSWPLGSVVTQG
Subjt:  MTSVTSASRLTFSIPDSSRF--CSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        CHASVSA+WLNKDDPHT EYCSP NIDSMHKVTLEVKGETQIVNLSEKL+ANSI HKLWIEQPENIPTCLATKPY KSVVSAFFKKLKL
Subjt:  CHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase1.0e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S+R CS ARVW  SS+ L S N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

A0A6J1KTS0 Aminoacyl-tRNA hydrolase1.0e-8086.1Show/hide
Query:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SV SASR TFSI +S+R CS ARVW  SS+ L S N NS  FSSASM+ES ESNSVLPLDDGGAKAEE ADVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL
        ASVSAIWLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQIVNLSEKLKANSI+HKLW+EQPENIPTCLA+KPY KSVVS FFKKLKL
Subjt:  ASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKL

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD13.5e-2548.31Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G++V Q CHA+ +A+ L++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLAT

Query:  KPYLKSVVSAFFKKLKLF
        +PY K  VS + KK +LF
Subjt:  KPYLKSVVSAFFKKLKLF

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD13.8e-2750.85Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G+VV Q CHA+ +A+ L++D PHT+ Y     ++ M KV LE   ET +  L+E L+  +I HKLW+EQPENIPTC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLAT

Query:  KPYLKSVVSAFFKKLKLF
        +PY K  VS + KK +LF
Subjt:  KPYLKSVVSAFFKKLKLF

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD12.3e-2447.46Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLAT
        VLVQY+VLR+DL     SWP G++V Q CHA+ +A+  ++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLAT

Query:  KPYLKSVVSAFFKKLKLF
        +PY K  V  + KK +LF
Subjt:  KPYLKSVVSAFFKKLKLF

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein1.0e-5168.92Show/hide
Query:  FSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNL
        F++AS + S ++  +  + D  + AE+  DV+VQYVVLRRDLIDSWPLGSVVTQGCHASV+AIW  KDDP T +YC P +IDSMHKVTLEVKGETQ++NL
Subjt:  FSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNL

Query:  SEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKLFLKT
        SEKLK   I HKLW+EQPENIPTC+ATKPY KS VS+FFKKLKL   T
Subjt:  SEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKLFLKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTGTAACTTCAGCATCTCGACTCACATTCTCCATTCCCGATTCCTCCAGGTTCTGTTCGAGGGCTAGGGTTTGGTCATCTTCTTCACTCAGTCTTCGCTCTTC
GAATCGAAATTCCAATCCATTTAGCTCAGCTTCGATGACTGAATCCACTGAAAGTAATTCGGTTCTTCCATTGGACGACGGCGGAGCGAAGGCGGAGGAGACCGCCGATG
TTTTGGTTCAGTACGTGGTGCTCCGGAGAGATCTGATCGATTCGTGGCCGCTCGGAAGTGTCGTAACTCAGGGATGCCATGCTTCAGTTTCCGCCATTTGGTTGAACAAA
GACGACCCCCACACTTCAGAGTACTGTAGTCCCGGAAACATCGATTCTATGCACAAGGTTACTCTCGAGGTGAAGGGAGAAACCCAGATCGTTAACTTATCAGAAAAACT
TAAAGCAAATTCGATCATCCATAAACTGTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAAGCCCTACCTCAAATCTGTTGTATCAGCATTTTTTAAAA
AGCTGAAACTCTTTTTGAAGACATCCAGAATTACAAACTATTTCTGCAGAGACACAAAAAAAGATGAGGGAGAAGAAAGGTTTATATTTTCGGCCAATCAAGTTCTGGAA
CCATATATGTCAAAGTTTTGGTTGGTATTTGATTTTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATCTGTAACTTCAGCATCTCGACTCACATTCTCCATTCCCGATTCCTCCAGGTTCTGTTCGAGGGCTAGGGTTTGGTCATCTTCTTCACTCAGTCTTCGCTCTTC
GAATCGAAATTCCAATCCATTTAGCTCAGCTTCGATGACTGAATCCACTGAAAGTAATTCGGTTCTTCCATTGGACGACGGCGGAGCGAAGGCGGAGGAGACCGCCGATG
TTTTGGTTCAGTACGTGGTGCTCCGGAGAGATCTGATCGATTCGTGGCCGCTCGGAAGTGTCGTAACTCAGGGATGCCATGCTTCAGTTTCCGCCATTTGGTTGAACAAA
GACGACCCCCACACTTCAGAGTACTGTAGTCCCGGAAACATCGATTCTATGCACAAGGTTACTCTCGAGGTGAAGGGAGAAACCCAGATCGTTAACTTATCAGAAAAACT
TAAAGCAAATTCGATCATCCATAAACTGTGGATAGAACAACCAGAGAACATTCCAACATGTCTTGCCACAAAGCCCTACCTCAAATCTGTTGTATCAGCATTTTTTAAAA
AGCTGAAACTCTTTTTGAAGACATCCAGAATTACAAACTATTTCTGCAGAGACACAAAAAAAGATGAGGGAGAAGAAAGGTTTATATTTTCGGCCAATCAAGTTCTGGAA
CCATATATGTCAAAGTTTTGGTTGGTATTTGATTTTTCCTAGAGATATCAAAGACCTTCTCAGCATTGTCGTTGTGGAGCCTCCTTTTAAGGAGGCAAAGGCCTTACTAT
GGAAGCATATCATAAGGGCCTTCTTTTGGATCCTTTGGAGAGAAAGAAACAATCGCATCTTCAAGGATACAGAGCTCGCCTTTGAAGAGATCTTCGATCTTGTCATTTAC
TATGCTATATCTTGGTGTAAAATGTCTAAATTATTTGCTTCATATTCATATGCATCCCTTCTTATCCATTGGGATAGCTTCTTGTAGTCACCTTTGACTTATCACC
Protein sequenceShow/hide protein sequence
MTSVTSASRLTFSIPDSSRFCSRARVWSSSSLSLRSSNRNSNPFSSASMTESTESNSVLPLDDGGAKAEETADVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNK
DDPHTSEYCSPGNIDSMHKVTLEVKGETQIVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYLKSVVSAFFKKLKLFLKTSRITNYFCRDTKKDEGEERFIFSANQVLE
PYMSKFWLVFDFS