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Lcy01g010960 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g010960
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 5-like
Genome locationChr01:31277483..31278722
RNA-Seq ExpressionLcy01g010960
SyntenyLcy01g010960
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR018289 - MULE transposase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]2.5e-3159.46Show/hide
Query:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP
        D+ +  N  TYTA+E D   WFKF+FM +A SID W YC+P ISVDG ++KNK+ GTL++ACT DG+S+I PLAF +VDSEND SW WFF NLKA F E 
Subjt:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP

Query:  NELVSVWQAQE
        NE+V V  A +
Subjt:  NELVSVWQAQE
TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]2.5e-3159.46Show/hide
Query:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP
        D+ +  N  TYTA+E D    FKF+FM++A SID W YC+P ISVDG ++KNK+ GTL++ACT DG+S+I PLAF++VDSEND SW WFF NLKA FGE 
Subjt:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP

Query:  NELVSVWQAQE
        NE+V V  A +
Subjt:  NELVSVWQAQE
TYK23191.1 uncharacterized protein E5676_scaffold142G002210 [Cucumis melo var. makuwa]2.1e-3060Show/hide
Query:  LSLNS--RTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEPN
        ++LNS   TYTA+E D    FKF+FM++A SID W YC+P ISVDG ++KNK+ GTL++ACT DG+S+I PLAF++VD END SW WFF NLKA FGE N
Subjt:  LSLNS--RTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEPN

Query:  ELVSVWQAQE
        E+V V  A +
Subjt:  ELVSVWQAQE
TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]2.5e-3159.46Show/hide
Query:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP
        D+ +  N  TYTA+E D    FKF+FM++A SID W YC+P ISVDG ++KNK+ GTL++ACT DG+S+I PLAF++VDSEND SW WFF NLKA FGE 
Subjt:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP

Query:  NELVSVWQAQE
        NE+V V  A +
Subjt:  NELVSVWQAQE
XP_016901440.1 PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo]7.2e-3158.56Show/hide
Query:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP
        D+ +  N  TYTA+E D    FKF+FM++A SID W YC+P ISVDG ++KNK+ GTL++ACT DG+S+I PLAF++VDSEND SW WFF NLK  FGE 
Subjt:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP

Query:  NELVSVWQAQE
        NE+V V  A +
Subjt:  NELVSVWQAQE
TrEMBL top hitse value%identityAlignment
A0A1S4E0D5 uncharacterized protein LOC1079912533.5e-3158.56Show/hide
Query:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP
        D+ +  N  TYTA+E D    FKF+FM++A SID W YC+P ISVDG ++KNK+ GTL++ACT DG+S+I PLAF++VDSEND SW WFF NLK  FGE 
Subjt:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP

Query:  NELVSVWQAQE
        NE+V V  A +
Subjt:  NELVSVWQAQE
A0A5A7VAU3 MuDRA-like transposase1.2e-3159.46Show/hide
Query:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP
        D+ +  N  TYTA+E D   WFKF+FM +A SID W YC+P ISVDG ++KNK+ GTL++ACT DG+S+I PLAF +VDSEND SW WFF NLKA F E 
Subjt:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP

Query:  NELVSVWQAQE
        NE+V V  A +
Subjt:  NELVSVWQAQE
A0A5D3CDB8 Uncharacterized protein1.2e-3159.46Show/hide
Query:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP
        D+ +  N  TYTA+E D    FKF+FM++A SID W YC+P ISVDG ++KNK+ GTL++ACT DG+S+I PLAF++VDSEND SW WFF NLKA FGE 
Subjt:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP

Query:  NELVSVWQAQE
        NE+V V  A +
Subjt:  NELVSVWQAQE
A0A5D3DHP7 Uncharacterized protein1.0e-3060Show/hide
Query:  LSLNS--RTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEPN
        ++LNS   TYTA+E D    FKF+FM++A SID W YC+P ISVDG ++KNK+ GTL++ACT DG+S+I PLAF++VD END SW WFF NLKA FGE N
Subjt:  LSLNS--RTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEPN

Query:  ELVSVWQAQE
        E+V V  A +
Subjt:  ELVSVWQAQE
A0A5D3E198 MuDRA-like transposase1.2e-3159.46Show/hide
Query:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP
        D+ +  N  TYTA+E D    FKF+FM++A SID W YC+P ISVDG ++KNK+ GTL++ACT DG+S+I PLAF++VDSEND SW WFF NLKA FGE 
Subjt:  DSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDASWKWFFHNLKAAFGEP

Query:  NELVSVWQAQE
        NE+V V  A +
Subjt:  NELVSVWQAQE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTGTTCGGTGGTGTCTGGAATGTCGCGGGGCTCTACAGTGATTTCAAGTCTGGAACTGTGACAGTTCCTTGTGATTCTAACCTCTCTCTCAACTCAAGAACATA
CACCGCCCAGGAAGTTGATTCAAATGACTGGTTCAAATTCTTCTTCATGAGTATTGCAATATCTATAGATGGGTGGAAATACTGCCTCCCTTTCATTTCTGTAGATGGGA
CATCTGTGAAGAACAAATTTAGTGGCACCCTTTTGACAGCCTGCACATTTGATGGTAGCTCAAAGATATTTCCACTGGCATTTTCTATTGTTGATTCTGAGAATGACGCG
TCATGGAAGTGGTTTTTCCATAACTTAAAAGCAGCGTTTGGAGAACCCAATGAGTTAGTAAGTGTCTGGCAGGCACAAGAGCATTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATATTGTTCGGTGGTGTCTGGAATGTCGCGGGGCTCTACAGTGATTTCAAGTCTGGAACTGTGACAGTTCCTTGTGATTCTAACCTCTCTCTCAACTCAAGAACATA
CACCGCCCAGGAAGTTGATTCAAATGACTGGTTCAAATTCTTCTTCATGAGTATTGCAATATCTATAGATGGGTGGAAATACTGCCTCCCTTTCATTTCTGTAGATGGGA
CATCTGTGAAGAACAAATTTAGTGGCACCCTTTTGACAGCCTGCACATTTGATGGTAGCTCAAAGATATTTCCACTGGCATTTTCTATTGTTGATTCTGAGAATGACGCG
TCATGGAAGTGGTTTTTCCATAACTTAAAAGCAGCGTTTGGAGAACCCAATGAGTTAGTAAGTGTCTGGCAGGCACAAGAGCATTGGTAA
Protein sequenceShow/hide protein sequence
MILFGGVWNVAGLYSDFKSGTVTVPCDSNLSLNSRTYTAQEVDSNDWFKFFFMSIAISIDGWKYCLPFISVDGTSVKNKFSGTLLTACTFDGSSKIFPLAFSIVDSENDA
SWKWFFHNLKAAFGEPNELVSVWQAQEHW