; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy01g011000 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g011000
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr01:31317047..31320436
RNA-Seq ExpressionLcy01g011000
SyntenyLcy01g011000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]4.4e-7662.56Show/hide
Query:  IRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQ
        I + L V +T+ +G YLGLPSQ +R+KC +F ++ +RVW+ LQGWKEKLFS GGKEVLIKAV QAIP Y+MSCF+ P++LC EINSL A FWWGS +  +
Subjt:  IRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQ

Query:  KIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQI
        KIHW SW RLC  K  GG+GF+DL IFNQAMLAKQ W++ ++ +SLL RVLRG+YF  G F+ A LGSNPS+ WRS+LWG+ELF +G+RWR+GNG S+ I
Subjt:  KIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQI

Query:  WGDPWIPRTGN
          DPWI R G+
Subjt:  WGDPWIPRTGN

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]2.0e-7647.71Show/hide
Query:  IRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQ
        I+N L V        YLGLP+   R++ + F  ++DRVWK LQGWK KLFS+GGKEVLIKAV QAIP YTMSCF+LP  L  E + + A FWWGS+   +
Subjt:  IRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQ

Query:  KIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQI
        KIHW +WN L   K  GGMGFRDL +FN+A+LAKQCWR+    +S+L RVL+GRYF    F+ A +  NPSY WRS+LWGR+L ++G+RWR+GNG S+ I
Subjt:  KIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQI

Query:  WGDPWIPRTGNDKVLGI-RDELRSETGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDASGASSS
        +GD W+P     K+L   R  L S   S +  E+G W  + VR E   D+A  IL+IP+    E++ + W  +  G +S++S Y   V+L+ +    + S
Subjt:  WGDPWIPRTGNDKVLGI-RDELRSETGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDASGASSS

Query:  TYKVEE
        +   EE
Subjt:  TYKVEE

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.2e-8456.77Show/hide
Query:  RSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQKIHWRSWNRLCRHKVLGGMGFRDL
        +S+  IF ++ DRVWK LQGWK KLFS+GGKEVLIK V QAIP YT+SCFKLPVS+CNE++ +   FWWGS++  +KIHW+SW  LC  K LGGMGFRD+
Subjt:  RSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQKIHWRSWNRLCRHKVLGGMGFRDL

Query:  HIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQIWGDPWIPRTGNDKVLGIRDELRSE
         IFNQAMLAKQ WR+ R   SLL + LRG+YF TG FL+A LG+ PSYAWRS+LWGR+LF++G RW+VGNG SI +  DPW+PR GN   +     +R+ 
Subjt:  HIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQIWGDPWIPRTGNDKVLGIRDELRSE

Query:  TGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLV
        + + L+   G WD  KVR   +  +AD IL  PL  Q +D+EI W  D  G FS++SAY LG+ L+
Subjt:  TGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLV

XP_030483669.1 uncharacterized protein LOC115700241 [Cannabis sativa]6.8e-7747.19Show/hide
Query:  QQFIRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTN
        Q F ++ L +        YLGLPS   R K  +F S+ D++WK+L  WKE+LFSVGGKEVL+KAVVQAIPTY MSCF+LPV+LCN+I S+ +NFWWGST+
Subjt:  QQFIRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTN

Query:  AGQKIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHS
        +G  IHW++WN LC+ KV GG+GFR+  +FNQA+LAKQ WRL    +SLL RVL  RYF  G  L A LG+ PS  WRS++WG+EL  QG++WRVG G +
Subjt:  AGQKIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHS

Query:  IQIWGDPWIPRTGNDKVLGIRDELRSETGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDASGAS
        I    D W+P          +    S   + LI +   WD+  +       D D ILAIPLS    ++ + W     G +++KS Y   VSL +     +
Subjt:  IQIWGDPWIPRTGNDKVLGIRDELRSETGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDASGAS

Query:  SST
        S+T
Subjt:  SST

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]5.7e-7645.21Show/hide
Query:  QQFIRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTN
        Q F ++ L +        YLGLPS + R K  +F  + D++WK++  W+E+LFS+GGKEVL+KAVVQAIPTY MSCF+LPV LCN+I  L + FWWG + 
Subjt:  QQFIRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTN

Query:  AGQKIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHS
         G  IHW++W  LC+ KV GGMGFR+   FNQA+LAKQ WR+  D SSL+ RVL+ RYF TG FL AT G+ PS  W+S++WG+EL  +G+RWR+G+G  
Subjt:  AGQKIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHS

Query:  IQIWGDPWIPRTGNDKVLGIRDELRSETGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDASGAS
        +     PWIP   N K L      R    +  I     WDV K++      D D IL+IPLS    ++ + W     G +++KS Y L   + +    +S
Subjt:  IQIWGDPWIPRTGNDKVLGIRDELRSETGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDASGAS

Query:  SST
         +T
Subjt:  SST

TrEMBL top hitse value%identityAlignment
A0A6J1CV63 uncharacterized protein LOC1110146622.1e-7662.56Show/hide
Query:  IRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQ
        I + L V +T+ +G YLGLPSQ +R+KC +F ++ +RVW+ LQGWKEKLFS GGKEVLIKAV QAIP Y+MSCF+ P++LC EINSL A FWWGS +  +
Subjt:  IRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQ

Query:  KIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQI
        KIHW SW RLC  K  GG+GF+DL IFNQAMLAKQ W++ ++ +SLL RVLRG+YF  G F+ A LGSNPS+ WRS+LWG+ELF +G+RWR+GNG S+ I
Subjt:  KIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQI

Query:  WGDPWIPRTGN
          DPWI R G+
Subjt:  WGDPWIPRTGN

A0A6J1DAR4 uncharacterized protein LOC1110189549.6e-7747.71Show/hide
Query:  IRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQ
        I+N L V        YLGLP+   R++ + F  ++DRVWK LQGWK KLFS+GGKEVLIKAV QAIP YTMSCF+LP  L  E + + A FWWGS+   +
Subjt:  IRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQ

Query:  KIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQI
        KIHW +WN L   K  GGMGFRDL +FN+A+LAKQCWR+    +S+L RVL+GRYF    F+ A +  NPSY WRS+LWGR+L ++G+RWR+GNG S+ I
Subjt:  KIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQI

Query:  WGDPWIPRTGNDKVLGI-RDELRSETGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDASGASSS
        +GD W+P     K+L   R  L S   S +  E+G W  + VR E   D+A  IL+IP+    E++ + W  +  G +S++S Y   V+L+ +    + S
Subjt:  WGDPWIPRTGNDKVLGI-RDELRSETGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDASGASSS

Query:  TYKVEE
        +   EE
Subjt:  TYKVEE

A0A6J1DRA0 uncharacterized protein LOC1110224235.6e-8556.77Show/hide
Query:  RSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQKIHWRSWNRLCRHKVLGGMGFRDL
        +S+  IF ++ DRVWK LQGWK KLFS+GGKEVLIK V QAIP YT+SCFKLPVS+CNE++ +   FWWGS++  +KIHW+SW  LC  K LGGMGFRD+
Subjt:  RSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQKIHWRSWNRLCRHKVLGGMGFRDL

Query:  HIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQIWGDPWIPRTGNDKVLGIRDELRSE
         IFNQAMLAKQ WR+ R   SLL + LRG+YF TG FL+A LG+ PSYAWRS+LWGR+LF++G RW+VGNG SI +  DPW+PR GN   +     +R+ 
Subjt:  HIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQIWGDPWIPRTGNDKVLGIRDELRSE

Query:  TGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLV
        + + L+   G WD  KVR   +  +AD IL  PL  Q +D+EI W  D  G FS++SAY LG+ L+
Subjt:  TGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLV

A0A7N2L6Z9 Reverse transcriptase domain-containing protein1.6e-7649.5Show/hide
Query:  MQQFIRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGST
        +++ I N LG +Q S    YLGLPS   RSK ++F  +++RV   L GWK KL S GGKE+LIKAV QAIPTYTMSCF LP SLC+E+  +  NFWWG  
Subjt:  MQQFIRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGST

Query:  NAGQKIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGH
        N   K+ W SW ++C+ K LGG+GFR+LH FN A+LAKQ WR+  +  SL  R+L+ +YF  G  L A+LGSNPSY WRS+    E+ ++G RWRVGNG 
Subjt:  NAGQKIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGH

Query:  SIQIWGDPWIPRTGNDKVL-GIRDELRSETGSSLIMEDGS-WDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDA
         I IW D W+P     KV+   R        SSLI  D   W ++ +R   L  DA+ IL IPLS    D+ I W+ + KG FS+KSAY + V+L+E A
Subjt:  SIQIWGDPWIPRTGNDKVL-GIRDELRSETGSSLIMEDGS-WDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDA

A0A803QJN9 Uncharacterized protein3.3e-7747.19Show/hide
Query:  QQFIRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTN
        Q F ++ L +        YLGLPS   R K  +F S+ D++WK+L  WKE+LFSVGGKEVL+KAVVQAIPTY MSCF+LPV+LCN+I S+ +NFWWGST+
Subjt:  QQFIRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTN

Query:  AGQKIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHS
        +G  IHW++WN LC+ KV GG+GFR+  +FNQA+LAKQ WRL    +SLL RVL  RYF  G  L A LG+ PS  WRS++WG+EL  QG++WRVG G +
Subjt:  AGQKIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHS

Query:  IQIWGDPWIPRTGNDKVLGIRDELRSETGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDASGAS
        I    D W+P          +    S   + LI +   WD+  +       D D ILAIPLS    ++ + W     G +++KS Y   VSL +     +
Subjt:  IQIWGDPWIPRTGNDKVLGIRDELRSETGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDASGAS

Query:  SST
        S+T
Subjt:  SST

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657504.6e-2829.17Show/hide
Query:  FRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQKIHWRSWNRLCRHKVLGGMGFRDLHIFNQA
        F  + +RV   + GW+EK  S  G+  L KAV+ ++P ++MS   LP S+ N ++ L   F WGST   +K H   W+++C  K  GG+G R     N+A
Subjt:  FRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQKIHWRSWNRLCRHKVLGGMGFRDLHIFNQA

Query:  MLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYA--WRSLLWG-RELFRQGVRWRVGNGHSIQIWGDPWIPRTGNDKVLGIRDELRSETGS
        +++K  WRL ++++SL   VL+ +Y          L    S++  WRS+  G R++   GV W  G+G  I+ W D W+       +L + +  R     
Subjt:  MLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYA--WRSLLWG-RELFRQGVRWRVGNGHSIQIWGDPWIPRTGNDKVLGIRDELRSETGS

Query:  SLIMED-----GSWDVEKVRGEVLRDDADHILAIPLS-CQREDEEIYWVPDGKGRFSLKSAYAL
        +++ +D       WD  K+      +    + A+ L       + + W     G+FS++SAY +
Subjt:  SLIMED-----GSWDVEKVRGEVLRDDADHILAIPLS-CQREDEEIYWVPDGKGRFSLKSAYAL

P93295 Uncharacterized mitochondrial protein AtMg003106.3e-3345.45Show/hide
Query:  AIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQKIHWRSWNRLCRHKV-LGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLR
        A+P Y MSCF+L   LC ++ S    FWW S    +KI W +W +LC+ K   GG+GFRDL  FNQA+LAKQ +R+     +LL R+LR RYF     + 
Subjt:  AIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQKIHWRSWNRLCRHKV-LGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLR

Query:  ATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQIWGDPWI
         ++G+ PSYAWRS++ GREL  +G+   +G+G   ++W D WI
Subjt:  ATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQIWGDPWI

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein5.2e-3544.37Show/hide
Query:  AIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQKIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRA
        A+PTYTM+CF LP ++C +I S+ A+FWW +    + +HW++W+ L  +K  GG+GF+D+  FN A+L KQ WR+     SL+ +V + RYF     L A
Subjt:  AIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQKIHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRA

Query:  TLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQIWGDPWI
         LGS PS+ W+S+   +E+ RQG R  VGNG  I IW   W+
Subjt:  TLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQIWGDPWI

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.4e-3445.45Show/hide
Query:  AIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQKIHWRSWNRLCRHKV-LGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLR
        A+P Y MSCF+L   LC ++ S    FWW S    +KI W +W +LC+ K   GG+GFRDL  FNQA+LAKQ +R+     +LL R+LR RYF     + 
Subjt:  AIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQKIHWRSWNRLCRHKV-LGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLR

Query:  ATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQIWGDPWI
         ++G+ PSYAWRS++ GREL  +G+   +G+G   ++W D WI
Subjt:  ATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQIWGDPWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACAATTTATCAGGAACACATTGGGGGTGGTTCAGACGAGCTCGCTTGGTAGTTATTTGGGGCTCCCTTCGCAAAATGCTAGGTCAAAGTGTGTAATCTTT
CGATCAGTTAGGGATCGGGTTTGGAAGGTTCTACAGGGGTGGAAGGAAAAACTTTTTTCGGTAGGTGGGAAGGAGGTCCTCATAAAGGCTGTTGTCCAGGCAATT
CCCACCTATACGATGAGCTGTTTTAAGCTGCCAGTGTCCCTATGTAATGAGATAAATAGTTTGTGTGCCAATTTTTGGTGGGGGTCAACAAATGCAGGACAAAAA
ATCCATTGGCGGAGTTGGAACCGGTTGTGTCGCCATAAGGTGTTGGGTGGTATGGGGTTTCGTGATCTACATATTTTTAATCAGGCTATGCTGGCTAAGCAGTGT
TGGCGGCTGTCCCGGGACCAGTCTAGTCTTTTGTATAGAGTTTTGCGTGGTAGGTATTTCTGTACGGGTTTTTTCCTTCGGGCAACATTGGGATCGAACCCGTCA
TATGCATGGAGGAGCCTACTGTGGGGTCGGGAACTGTTTAGACAAGGTGTTAGGTGGAGAGTTGGTAATGGCCATAGTATCCAGATATGGGGGGACCCTTGGATT
CCGAGGACCGGTAACGACAAGGTTTTGGGGATTCGAGATGAGCTTCGTTCAGAGACGGGGTCCTCGTTGATTATGGAGGATGGGTCTTGGGATGTAGAGAAGGTG
AGGGGGGAAGTTCTGCGGGATGATGCAGATCATATTTTGGCAATACCATTAAGTTGTCAGAGAGAGGACGAAGAAATATATTGGGTGCCAGATGGTAAGGGGCGT
TTCTCTTTGAAAAGTGCTTATGCGCTTGGGGTGAGTTTGGTTGAAGATGCGTCTGGTGCATCGTCATCCACATATAAGGTGGAGGAGAATAAAAGGTACTTGCAG
AATCTGGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACAATTTATCAGGAACACATTGGGGGTGGTTCAGACGAGCTCGCTTGGTAGTTATTTGGGGCTCCCTTCGCAAAATGCTAGGTCAAAGTGTGTAATCTTT
CGATCAGTTAGGGATCGGGTTTGGAAGGTTCTACAGGGGTGGAAGGAAAAACTTTTTTCGGTAGGTGGGAAGGAGGTCCTCATAAAGGCTGTTGTCCAGGCAATT
CCCACCTATACGATGAGCTGTTTTAAGCTGCCAGTGTCCCTATGTAATGAGATAAATAGTTTGTGTGCCAATTTTTGGTGGGGGTCAACAAATGCAGGACAAAAA
ATCCATTGGCGGAGTTGGAACCGGTTGTGTCGCCATAAGGTGTTGGGTGGTATGGGGTTTCGTGATCTACATATTTTTAATCAGGCTATGCTGGCTAAGCAGTGT
TGGCGGCTGTCCCGGGACCAGTCTAGTCTTTTGTATAGAGTTTTGCGTGGTAGGTATTTCTGTACGGGTTTTTTCCTTCGGGCAACATTGGGATCGAACCCGTCA
TATGCATGGAGGAGCCTACTGTGGGGTCGGGAACTGTTTAGACAAGGTGTTAGGTGGAGAGTTGGTAATGGCCATAGTATCCAGATATGGGGGGACCCTTGGATT
CCGAGGACCGGTAACGACAAGGTTTTGGGGATTCGAGATGAGCTTCGTTCAGAGACGGGGTCCTCGTTGATTATGGAGGATGGGTCTTGGGATGTAGAGAAGGTG
AGGGGGGAAGTTCTGCGGGATGATGCAGATCATATTTTGGCAATACCATTAAGTTGTCAGAGAGAGGACGAAGAAATATATTGGGTGCCAGATGGTAAGGGGCGT
TTCTCTTTGAAAAGTGCTTATGCGCTTGGGGTGAGTTTGGTTGAAGATGCGTCTGGTGCATCGTCATCCACATATAAGGTGGAGGAGAATAAAAGGTACTTGCAG
AATCTGGCGTGA
Protein sequenceShow/hide protein sequence
MQQFIRNTLGVVQTSSLGSYLGLPSQNARSKCVIFRSVRDRVWKVLQGWKEKLFSVGGKEVLIKAVVQAIPTYTMSCFKLPVSLCNEINSLCANFWWGSTNAGQK
IHWRSWNRLCRHKVLGGMGFRDLHIFNQAMLAKQCWRLSRDQSSLLYRVLRGRYFCTGFFLRATLGSNPSYAWRSLLWGRELFRQGVRWRVGNGHSIQIWGDPWI
PRTGNDKVLGIRDELRSETGSSLIMEDGSWDVEKVRGEVLRDDADHILAIPLSCQREDEEIYWVPDGKGRFSLKSAYALGVSLVEDASGASSSTYKVEENKRYLQ
NLA