; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy01g013880 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g013880
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionclp protease adapter protein ClpF, chloroplastic
Genome locationChr01:35343698..35347904
RNA-Seq ExpressionLcy01g013880
SyntenyLcy01g013880
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009840 - chloroplastic endopeptidase Clp complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR001943 - UVR domain
IPR011722 - Hemimethylated DNA-binding domain
IPR036623 - Hemimethylated DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064751.1 UvrB/uvrC motif-containing protein isoform 1 [Cucumis melo var. makuwa]7.2e-17091.12Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+TALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLN+IRLRADLQ AIESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY
        AYESAEYSFRLGQKVRH+IFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLLAPEEPDTERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVD+AGDFIPIKQLREKYNRPRHE+PFDPQDDEQQGDD
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

XP_008445473.1 PREDICTED: uncharacterized protein LOC103488481 [Cucumis melo]5.5e-17091.42Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+TALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLN+IRLRADLQ AIESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY
        AYESAEYSFRLGQKVRH+IFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLLAPEEPDTERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVD+AGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

XP_022132156.1 clp protease adapter protein ClpF, chloroplastic [Momordica charantia]8.8e-16890.75Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ
        MV+D+SIHAL ALGDPKVYGSTL WRKNFKQ S+ QL S  CF HQ +RSFS TSQP  L+RGNFK KAGWLFKGGGQGLGARIERSENANNDILIFFFQ
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYE
        LDLATRVQYALNIEQYEIAQ+LRTKLTEVE EIIKQQESK GLTSKSEVQDKGLN+IRLRADLQNAIESENYALAAQLRD+ISKLETESLAASA VLAYE
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYE

Query:  SAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGVD
        +AEYSFRLGQKVRH+IFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYVPEENLLAPEEPD ERFDHPYNSFLFYGVD
Subjt:  SAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGVD

Query:  TAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
         AGDFIPIKQLREKYNRPRHEVP DPQDDEQ+GDD
Subjt:  TAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

XP_022962595.1 clp protease adapter protein ClpF, chloroplastic [Cucurbita moschata]2.2e-16690.21Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQIS-QTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFF
        MV+DLSIHALTALGDPKVYGSTLSWRKNFKQ S  T LTSRQ FWHQ MRSFS  SQP  LKRGNFKVKAGWLF+GGGQGL ARIERSENANNDILIFFF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQIS-QTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVE E+IKQQESKRGLTSKSEVQDKGL++IRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGV
        ESAEYSFRLGQK RH+IFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYV EENLL PEEPDTERFDHPYNSFLFYGV
Subjt:  ESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGV

Query:  DTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD
        D+AGDFIP+KQLREKYNRPRHEVP+DPQ DDEQ+GDD
Subjt:  DTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD

XP_038886599.1 clp protease adapter protein ClpF, chloroplastic [Benincasa hispida]1.6e-17292.9Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHALTALGDPKVYGS LSWR+N   FKQ S TQLTSRQCFW+QCMRSFS TSQP  LKRGNFKVKAGWLFKGGGQ LG RIERSENANNDILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLN+IRLRADLQ A+ESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY
        AYESAEYSFRLGQKVRH+IFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLL PEEPD E FDHPYNSFLFY
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVDTAGDFIPIKQLREKYNRPR+EVPFDPQDDEQ+GDD
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

TrEMBL top hitse value%identityAlignment
A0A0A0KD67 YccV-like domain-containing protein1.4e-16689.35Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+TALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAE+IKQQESK+GLTSKSEVQDKGLN+IRLRADLQ A+ESENYALAAQLRDEISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY
        AYESAEYSFRLGQKVRH+IFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLLAPEEPDTERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVD+AGDFIPIKQLREKYNRPR+EVPF  +DDEQQGDD
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A1S3BCC1 uncharacterized protein LOC1034884812.7e-17091.42Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+TALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLN+IRLRADLQ AIESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY
        AYESAEYSFRLGQKVRH+IFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLLAPEEPDTERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVD+AGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A5A7VGB7 UvrB/uvrC motif-containing protein isoform 13.5e-17091.12Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF
        MV+DLSIHA+TALGDP VYGS LSWR+N   FKQ S TQLTSRQCFWHQCMRSFS TSQP   KRG+FK++AGWLFKGGGQ  G RIERSENANNDILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKN---FKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTEVEAEIIKQQESK+GLTSKSEVQDKGLN+IRLRADLQ AIESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY
        AYESAEYSFRLGQKVRH+IFGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYV EENLLAPEEPDTERFDHPY+SFLFY
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
        GVD+AGDFIPIKQLREKYNRPRHE+PFDPQDDEQQGDD
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A6J1BRG5 clp protease adapter protein ClpF, chloroplastic4.3e-16890.75Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ
        MV+D+SIHAL ALGDPKVYGSTL WRKNFKQ S+ QL S  CF HQ +RSFS TSQP  L+RGNFK KAGWLFKGGGQGLGARIERSENANNDILIFFFQ
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQ

Query:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYE
        LDLATRVQYALNIEQYEIAQ+LRTKLTEVE EIIKQQESK GLTSKSEVQDKGLN+IRLRADLQNAIESENYALAAQLRD+ISKLETESLAASA VLAYE
Subjt:  LDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYE

Query:  SAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGVD
        +AEYSFRLGQKVRH+IFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYVPEENLLAPEEPD ERFDHPYNSFLFYGVD
Subjt:  SAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGVD

Query:  TAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD
         AGDFIPIKQLREKYNRPRHEVP DPQDDEQ+GDD
Subjt:  TAGDFIPIKQLREKYNRPRHEVPFDPQDDEQQGDD

A0A6J1HFJ3 clp protease adapter protein ClpF, chloroplastic1.0e-16690.21Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQIS-QTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFF
        MV+DLSIHALTALGDPKVYGSTLSWRKNFKQ S  T LTSRQ FWHQ MRSFS  SQP  LKRGNFKVKAGWLF+GGGQGL ARIERSENANNDILIFFF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQIS-QTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFF

Query:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY
        QLDLATRVQYALNIEQYEIAQELRTKLTEVE E+IKQQESKRGLTSKSEVQDKGL++IRLRADLQ AIESENY  AAQLRD+ISKLETESLAASAKVLAY
Subjt:  QLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAY

Query:  ESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGV
        ESAEYSFRLGQK RH+IFGYRGV+CGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYV EENLL PEEPDTERFDHPYNSFLFYGV
Subjt:  ESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGV

Query:  DTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD
        D+AGDFIP+KQLREKYNRPRHEVP+DPQ DDEQ+GDD
Subjt:  DTAGDFIPIKQLREKYNRPRHEVPFDPQ-DDEQQGDD

SwissProt top hitse value%identityAlignment
O94952 F-box only protein 219.6e-0830.91Show/hide
Query:  FRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGVDTAGDF
        + +G  ++H+ +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y  +ENL    EP  +   HP +   ++   T   +
Subjt:  FRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGVDTAGDF

Query:  IPIKQLREKY
        IP  +L  +Y
Subjt:  IPIKQLREKY

Q5R5S1 F-box only protein 219.6e-0830.91Show/hide
Query:  FRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGVDTAGDF
        + +G  ++H+ +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y  +ENL    EP  +   HP +   ++   T   +
Subjt:  FRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGVDTAGDF

Query:  IPIKQLREKY
        IP  +L  +Y
Subjt:  IPIKQLREKY

Q67Y99 Clp protease adapter protein ClpF, chloroplastic3.3e-11768.47Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMR-SFSSTSQPYSLKRGN-FKVKAGWLFKGGG-QGLGARIERSENANNDILIF
        MV+  S+  LT  G  KV  S+L  R     +  + L   +C   Q +R S S  S   SLK+ N  +V+A W F+GGG QGL    ERSE+AN DILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMR-SFSSTSQPYSLKRGN-FKVKAGWLFKGGG-QGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVE E I+ QE KRG ++KSE QDKG+++IRLRADLQNAI+SE+Y LAA+LRDEISKLE ESLA SAK L
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY
        A+E AEY+FRLGQK+RH+ FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLLAPE+PD ERFDHPY SFL+Y
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE
        G DTAGDFIP+KQLREKYNRPRHEVPFD QD++
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE

Q8VDH1 F-box only protein 211.6e-0728.68Show/hide
Query:  ESLAASAKVLAYES-AEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTER
        E +    K+ + E   +  + +G  ++H+ +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y  +ENL    EP  + 
Subjt:  ESLAASAKVLAYES-AEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTER

Query:  FDHPYNSFLFYGVDTAGDFIPIKQLREKY
          HP +   ++   T   +IP  +L  +Y
Subjt:  FDHPYNSFLFYGVDTAGDFIPIKQLREKY

Arabidopsis top hitse value%identityAlignment
AT2G03390.1 uvrB/uvrC motif-containing protein2.3e-11868.47Show/hide
Query:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMR-SFSSTSQPYSLKRGN-FKVKAGWLFKGGG-QGLGARIERSENANNDILIF
        MV+  S+  LT  G  KV  S+L  R     +  + L   +C   Q +R S S  S   SLK+ N  +V+A W F+GGG QGL    ERSE+AN DILIF
Subjt:  MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMR-SFSSTSQPYSLKRGN-FKVKAGWLFKGGG-QGLGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYA+N+EQY+IAQ+LR KLTEVE E I+ QE KRG ++KSE QDKG+++IRLRADLQNAI+SE+Y LAA+LRDEISKLE ESLA SAK L
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY
        A+E AEY+FRLGQK+RH+ FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLLAPE+PD ERFDHPY SFL+Y
Subjt:  AYESAEYSFRLGQKVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFY

Query:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE
        G DTAGDFIP+KQLREKYNRPRHEVPFD QD++
Subjt:  GVDTAGDFIPIKQLREKYNRPRHEVPFDPQDDE

AT2G03390.2 uvrB/uvrC motif-containing protein1.5e-9678.18Show/hide
Query:  LNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQ
        +N+EQY+IAQ+LR KLTEVE E I+ QE KRG ++KSE QDKG+++IRLRADLQNAI+SE+Y LAA+LRDEISKLE ESLA SAK LA+E AEY+FRLGQ
Subjt:  LNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQ

Query:  KVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQ
        K+RH+ FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYV E+NLLAPE+PD ERFDHPY SFL+YG DTAGDFIP+KQ
Subjt:  KVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQ

Query:  LREKYNRPRHEVPFDPQDDE
        LREKYNRPRHEVPFD QD++
Subjt:  LREKYNRPRHEVPFDPQDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCGGGATTTGTCAATACACGCTCTGACCGCCTTGGGAGATCCTAAGGTTTATGGATCAACTCTTTCGTGGAGGAAGAATTTCAAGCAGATAAGTCAAACC
CAATTAACTTCCAGGCAATGCTTTTGGCATCAATGCATGCGAAGCTTTTCCTCAACTAGCCAGCCCTATAGTTTGAAACGAGGAAATTTCAAGGTTAAAGCTGGA
TGGTTGTTTAAGGGGGGTGGACAAGGGTTGGGTGCTCGTATAGAGCGCAGCGAGAATGCTAACAATGATATCTTAATCTTCTTTTTCCAGCTGGACCTGGCAACA
AGAGTACAGTATGCTTTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAGAACAAAGTTAACTGAGGTTGAAGCAGAAATCATCAAGCAGCAAGAATCAAAA
AGAGGGTTAACTTCAAAGAGTGAAGTTCAAGACAAAGGTTTAAATATGATTCGTCTACGCGCAGACTTGCAGAATGCTATTGAAAGTGAAAATTATGCTTTGGCA
GCACAACTGCGGGATGAGATTTCCAAACTGGAAACTGAGTCCCTAGCTGCATCTGCAAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTAGATTGGGACAG
AAAGTGAGGCACAGAATTTTTGGATACAGAGGTGTGGTTTGTGGAATGGATCCTGTATGCTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAACTA
TCTCGAGGTTCTAATCAGCCATTTTATCAGGTTTTAGTAGATGTTCGTACAGACCCTGATTTGCTGGTTGCATATGTTCCTGAGGAAAATCTTCTTGCTCCTGAA
GAACCAGATACGGAGAGGTTTGATCATCCGTATAATTCCTTCTTATTCTATGGAGTGGATACAGCCGGGGATTTCATTCCTATAAAGCAACTGCGGGAGAAGTAT
AATCGGCCTCGACATGAAGTCCCCTTCGATCCTCAAGATGATGAGCAACAGGGTGATGATTAA
mRNA sequenceShow/hide mRNA sequence
CTCAATTTCTCAACTGTTGTGGTTGCAAAAAAAAGTGCTTCTCATCGCTTCTCCGGCAGCTCTCAGAAATGGTGCGGGATTTGTCAATACACGCTCTGACCGCCT
TGGGAGATCCTAAGGTTTATGGATCAACTCTTTCGTGGAGGAAGAATTTCAAGCAGATAAGTCAAACCCAATTAACTTCCAGGCAATGCTTTTGGCATCAATGCA
TGCGAAGCTTTTCCTCAACTAGCCAGCCCTATAGTTTGAAACGAGGAAATTTCAAGGTTAAAGCTGGATGGTTGTTTAAGGGGGGTGGACAAGGGTTGGGTGCTC
GTATAGAGCGCAGCGAGAATGCTAACAATGATATCTTAATCTTCTTTTTCCAGCTGGACCTGGCAACAAGAGTACAGTATGCTTTGAACATTGAGCAGTATGAAA
TTGCACAAGAATTGAGAACAAAGTTAACTGAGGTTGAAGCAGAAATCATCAAGCAGCAAGAATCAAAAAGAGGGTTAACTTCAAAGAGTGAAGTTCAAGACAAAG
GTTTAAATATGATTCGTCTACGCGCAGACTTGCAGAATGCTATTGAAAGTGAAAATTATGCTTTGGCAGCACAACTGCGGGATGAGATTTCCAAACTGGAAACTG
AGTCCCTAGCTGCATCTGCAAAAGTTCTGGCTTACGAAAGTGCTGAATATAGTTTTAGATTGGGACAGAAAGTGAGGCACAGAATTTTTGGATACAGAGGTGTGG
TTTGTGGAATGGATCCTGTATGCTGTGAATCAAGTTCCTGGATGGAGATAGCACAAGTTGAAAAACTATCTCGAGGTTCTAATCAGCCATTTTATCAGGTTTTAG
TAGATGTTCGTACAGACCCTGATTTGCTGGTTGCATATGTTCCTGAGGAAAATCTTCTTGCTCCTGAAGAACCAGATACGGAGAGGTTTGATCATCCGTATAATT
CCTTCTTATTCTATGGAGTGGATACAGCCGGGGATTTCATTCCTATAAAGCAACTGCGGGAGAAGTATAATCGGCCTCGACATGAAGTCCCCTTCGATCCTCAAG
ATGATGAGCAACAGGGTGATGATTAATCAATGCACATCTTTAGAAATACGTCGTTCAACGCCTTCCAAAATGGTTTGTTCATCTCATTTCTTCCGTTCTGTGGTT
AGGTTCCATATTCATTGATTTTCAGTAGATTTGATGAAACCGTCATAGTCGAAAAATCTGAATGAATCAGTGATATACATGTCGTATACATAGCATCTCGTTATT
TTCTCTTCTCGTTGCATTGGTACCGAAATTTCGAAGGTGTTAATACTTGAACAGCTGAGTATCAACAAGAATTAATCAGCTAGCTTGATAATGATATATATTGTA
GTTCTTATTTGGCTACTTCACTTTGGTTCAAGTTTACTGTTTCTTCAACATAGTTTAATTTGGCAACCAAATTGCAATAGAAGTGGAGGAAAGAAAAAGGGTTTT
GAAAAGGAAGCAGTGGAATTTATATAGCCCCAATGGAACTGAAACCTTCTCATCATCTAGAGTATTTAGTCATACAGCTTACATCATCAATTGAAGTTGTTGATA
TGGAGACTGATATGAGTGCTAAAATGTTGGCTGTCATATAAATTTTATGTGGTTTACATTTGCTCTTATTTGATTTGTTAAATATTATGATCTCTAAAGATGTAC
AACATTTTCATTTTGTT
Protein sequenceShow/hide protein sequence
MVRDLSIHALTALGDPKVYGSTLSWRKNFKQISQTQLTSRQCFWHQCMRSFSSTSQPYSLKRGNFKVKAGWLFKGGGQGLGARIERSENANNDILIFFFQLDLAT
RVQYALNIEQYEIAQELRTKLTEVEAEIIKQQESKRGLTSKSEVQDKGLNMIRLRADLQNAIESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQ
KVRHRIFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVPEENLLAPEEPDTERFDHPYNSFLFYGVDTAGDFIPIKQLREKY
NRPRHEVPFDPQDDEQQGDD