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Lcy01g014560 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g014560
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCysteine protease-3
Genome locationChr01:35994221..35997206
RNA-Seq ExpressionLcy01g014560
SyntenyLcy01g014560
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0051603 - proteolysis involved in cellular protein catabolic process (biological process)
GO:0005615 - extracellular space (cellular component)
GO:0005764 - lysosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043625 - delta DNA polymerase complex (cellular component)
GO:0004197 - cysteine-type endopeptidase activity (molecular function)
InterPro domainsIPR000668 - Peptidase C1A, papain C-terminal
IPR025660 - Cysteine peptidase, histidine active site
IPR025661 - Cysteine peptidase, asparagine active site
IPR038765 - Papain-like cysteine peptidase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029224.1 hypothetical protein SDJN02_07562, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2571.83Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF
        GVFDGYCG+ LNH VVAIGYGTTE+GTDYW+V+NSWGV WGEEGY+R+KRG++  EG C I    SYPIK+
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF

XP_004142960.1 vignain [Cucumis sativus]6.1e-2673.24Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF
        GVFDGYCG+ LNH VVAIGYGTTEDGTDYWLV+NSWGV WGE+GY+R+KRG++  EG C I    SYPIK+
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF

XP_008444390.1 PREDICTED: vignain-like [Cucumis melo]5.5e-2774.65Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF
        GVFDGYCG+ LNH VVAIGYGTTEDGTDYW+V+NSWGV WGE+GY+R+KRG++ PEG C I    SYPIKF
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF

XP_023002122.1 vignain-like [Cucurbita maxima]1.4e-2571.83Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF
        GVFDGYCG+ LNH VV IGYGTT+ GTDYW V+NSWGV WGE+GYIR+KRG++DPEG C I    SYP+KF
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF

XP_038885064.1 LOW QUALITY PROTEIN: vignain-like [Benincasa hispida]2.5e-2776.06Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF
        GVFDGYCG+ LNH VVAIGYGTTEDGTDYW+V+NSWGV WGEEGY+R+KRG++ PEG C I    SYPIKF
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF

TrEMBL top hitse value%identityAlignment
A0A0A0LMU4 Uncharacterized protein3.0e-2673.24Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF
        GVFDGYCG+ LNH VVAIGYGTTEDGTDYWLV+NSWGV WGE+GY+R+KRG++  EG C I    SYPIK+
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF

A0A1S3BA70 vignain-like2.7e-2774.65Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF
        GVFDGYCG+ LNH VVAIGYGTTEDGTDYW+V+NSWGV WGE+GY+R+KRG++ PEG C I    SYPIKF
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF

A0A6J1GHN5 vignain-like9.5e-2570.42Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF
        GVFDG CG+ LNH VV IGYGTT+ GTDYW V+NSWGV WGE+GYIR+KRG++DPEG C I    SYP+KF
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF

A0A6J1K7P4 vignain-like8.6e-2671.83Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF
        GVFDGYCG+ LNH VVAIGYGTTE+GTDYW+V+NSWGV WGEEGY+R+KRG++  EG C I    SYPIK+
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF

A0A6J1KIL0 vignain-like6.6e-2671.83Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF
        GVFDGYCG+ LNH VV IGYGTT+ GTDYW V+NSWGV WGE+GYIR+KRG++DPEG C I    SYP+KF
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF

SwissProt top hitse value%identityAlignment
O65039 Vignain1.1e-2264.29Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK
        GVF G CG+ L+H V  +GYGTT DGT YW VKNSWG +WGE+GYIR++RGI D EG C I    SYPIK
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK

P12412 Vignain7.3e-2260Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK
        GVF G C + LNH V  +GYGTT DGT+YW+V+NSWG +WGE+GYIR++R I   EG C I  + SYPIK
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK

P25803 Vignain1.1e-2261.43Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK
        GVF G C + LNH V  +GYGTT DGT+YW+V+NSWG +WGE GYIR++R I   EG C I  +PSYPIK
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK

P43156 Thiol protease SEN1024.3e-2261.43Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK
        GVF G CG+ L+H V  +GYG T DGT YW+VKNSWG +WGE GYIR++RGI D  G C I    SYPIK
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK

Q9FGR9 KDEL-tailed cysteine endopeptidase CEP11.9e-2262.86Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK
        GVF G CG+ LNH V  +GYGTT DGT YW+VKNSWG +WGE+GYIR++RGI   EG C I    SYP+K
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK

Arabidopsis top hitse value%identityAlignment
AT1G47128.1 Granulin repeat cysteine protease family protein5.7e-2260Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK
        G+FDG CG+ L+H VVA+GYG TE+G DYW+V+NSWG  WGE GY+R+ R I    G C I   PSYPIK
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK

AT2G27420.1 Cysteine proteinases superfamily protein5.7e-2255.07Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPI
        GVF+G CG+ L+HAV  +GYG +E+GT YW+VKNSWG  WGE GY+R+KR +D P+G C +  +  YP+
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPI

AT3G48350.1 Cysteine proteinases superfamily protein3.4e-2258.57Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK
        GVF G CG+ LNH VV +GYG T++GT YW+V+NSWG +WGE GY+R++RGI + EG C I    SYP K
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK

AT5G43060.1 Granulin repeat cysteine protease family protein3.4e-2261.43Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK
        GVFDG CG+ L+H VVA+GYG TE+G DYW+V+NSWG +WGE GYI++ R I+ P G C I    SYPIK
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK

AT5G50260.1 Cysteine proteinases superfamily protein1.4e-2362.86Show/hide
Query:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK
        GVF G CG+ LNH V  +GYGTT DGT YW+VKNSWG +WGE+GYIR++RGI   EG C I    SYP+K
Subjt:  GVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTGTTCGATGGATATTGTGGATCATCACTTAATCATGCAGTGGTGGCGATTGGCTACGGAACAACTGAAGACGGAACAGATTATTGGCTCGTAAAAAAC
TCGTGGGGAGTTCAATGGGGAGAGGAAGGCTACATAAGGTTGAAACGAGGAATCGATGATCCAGAAGGAACGTGTAGAATAACTACAATACCCTCTTATCCCATC
AAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTGTTCGATGGATATTGTGGATCATCACTTAATCATGCAGTGGTGGCGATTGGCTACGGAACAACTGAAGACGGAACAGATTATTGGCTCGTAAAAAAC
TCGTGGGGAGTTCAATGGGGAGAGGAAGGCTACATAAGGTTGAAACGAGGAATCGATGATCCAGAAGGAACGTGTAGAATAACTACAATACCCTCTTATCCCATC
AAGTTTTAG
Protein sequenceShow/hide protein sequence
MGVFDGYCGSSLNHAVVAIGYGTTEDGTDYWLVKNSWGVQWGEEGYIRLKRGIDDPEGTCRITTIPSYPIKF