; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy01g018260 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g018260
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
Genome locationChr01:39828841..39829340
RNA-Seq ExpressionLcy01g018260
SyntenyLcy01g018260
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060932.1 hypothetical protein E6C27_scaffold501G00650 [Cucumis melo var. makuwa]2.5e-0452.78Show/hide
Query:  LTAVALLLLLLLISGDS-TNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR
        LTAV  L LLLLIS  S       VV LKK      PS  +  H ++ R   +V  SSKRKVPNASDPLHNR
Subjt:  LTAVALLLLLLLISGDS-TNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR
TrEMBL top hitse value%identityAlignment
A0A5A7UYF8 Uncharacterized protein1.2e-0452.78Show/hide
Query:  LTAVALLLLLLLISGDS-TNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR
        LTAV  L LLLLIS  S       VV LKK      PS  +  H ++ R   +V  SSKRKVPNASDPLHNR
Subjt:  LTAVALLLLLLLISGDS-TNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR
A0A6N2N0D3 Uncharacterized protein5.9e-0451.47Show/hide
Query:  VALLLLLLLISGDSTNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR
        V L LL+LL+SGD    E  +V+++ L++   PS    + +QQ +SF  +F SSKRKVPNASDPLHNR
Subjt:  VALLLLLLLISGDSTNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTGTTCAAGCTGCGGTTAACTGCGGTGGCTTTGCTGCTGCTGCTGCTTCTGATCTCAGGCGACAGTACTAATGGAGAAGCCAAAGTTGTTGATCTGAAG
AAGCTTAAAGAAGCAACAGCTCCAAGTCATGAGAAAGACAGCCACAGACAACAGACGAGGTCATTCCATCATGTTTTCATGTCCAGTAAGAGGAAGGTTCCAAAT
GCTTCAGATCCGCTCCACAATCGTTGA
mRNA sequenceShow/hide mRNA sequence
CCATCATTTTATACAACCCTTCCTCTTTCTTCTTCTTCTTCTTTCACTGCCCAACGAACAAATACAAAGCCATTCACCTTTTCCAAGGCCATCAACAAATAACAG
ATACCCATTTCATTTCTCTGTCCATGCGGTTGTTCAAGCTGCGGTTAACTGCGGTGGCTTTGCTGCTGCTGCTGCTTCTGATCTCAGGCGACAGTACTAATGGAG
AAGCCAAAGTTGTTGATCTGAAGAAGCTTAAAGAAGCAACAGCTCCAAGTCATGAGAAAGACAGCCACAGACAACAGACGAGGTCATTCCATCATGTTTTCATGT
CCAGTAAGAGGAAGGTTCCAAATGCTTCAGATCCGCTCCACAATCGTTGAGTTTTCTTCTTGAATTTCTTTTCGTTACATCGGTTCGGTATATATATAATAAACA
GATTTATTAAATATATAACATTTCTCATACTTATTATATTTAAGACATTTTGCTTCTCTTTCCTTTGCCTGATTTCCCCG
Protein sequenceShow/hide protein sequence
MRLFKLRLTAVALLLLLLLISGDSTNGEAKVVDLKKLKEATAPSHEKDSHRQQTRSFHHVFMSSKRKVPNASDPLHNR