; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy01g020020 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g020020
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNA-binding protein 24-A
Genome locationChr01:41423956..41429928
RNA-Seq ExpressionLcy01g020020
SyntenyLcy01g020020
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR037366 - BOULE/DAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045404.1 RNA-binding protein 24-A [Cucumis melo var. makuwa]3.8e-15696.85Show/hide
Query:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY--GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPPIS+  GRLR P V+VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
Subjt:  RANCNLASLGRPRPPISY--GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

KAG6599081.1 putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia]6.6e-15696.13Show/hide
Query:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIY
        RANCNLASLGRPRPPISYGRLRPP V+VGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASP IY
Subjt:  RANCNLASLGRPRPPISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIY

Query:  HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQF GPNVN LTSSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG
Subjt:  HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

XP_004146763.1 RNA-binding protein 24-A [Cucumis sativus]2.3e-15696.85Show/hide
Query:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY--GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPP+SY  GRLR P V+VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
Subjt:  RANCNLASLGRPRPPISY--GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

XP_008464801.1 PREDICTED: RNA-binding protein 24-A [Cucumis melo]3.8e-15696.85Show/hide
Query:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY--GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPPIS+  GRLR P V+VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
Subjt:  RANCNLASLGRPRPPISY--GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

XP_022946505.1 RNA-binding protein 24-A [Cucurbita moschata]6.6e-15696.13Show/hide
Query:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIY
        RANCNLASLGRPRPPISYGRLRPP V+VGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASP IY
Subjt:  RANCNLASLGRPRPPISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIY

Query:  HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQF GPNVN LTSSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG
Subjt:  HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

TrEMBL top hitse value%identityAlignment
A0A1S3CME8 RNA-binding protein 24-A1.9e-15696.85Show/hide
Query:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY--GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPPIS+  GRLR P V+VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
Subjt:  RANCNLASLGRPRPPISY--GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

A0A5D3CHF9 RNA-binding protein 24-A1.9e-15696.85Show/hide
Query:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY--GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
        RANCNLASLGRPRPPIS+  GRLR P V+VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT
Subjt:  RANCNLASLGRPRPPISY--GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPT

Query:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        IYHYGQLGQTVPGGHGYGAVHGYAMPSPQI+QFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  IYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

A0A6J1DNT6 RNA-binding protein 24-A3.5e-15594.72Show/hide
Query:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQHI GPSSISGSS+SSGFLNSPFGDTTYTKVFVGGLAWETQSETMRR+FEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
Subjt:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIY
        RANCNLASLGRPRPPISYGRLRPP  +VGGMQPNRGT+IGNFGYQQPVSYAYQQGLAYPPYGYA YGPEY+YPQGGYNPF+GQQYLQIYG+PGS SP IY
Subjt:  RANCNLASLGRPRPPISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIY

Query:  HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        HYGQLGQTVPGGHGYG VHGYAMPSPQIVQFSGPNVNALTSSP+PTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Subjt:  HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

A0A6J1G3W1 RNA-binding protein 24-A3.2e-15696.13Show/hide
Query:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIY
        RANCNLASLGRPRPPISYGRLRPP V+VGGMQPNRG YIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASP IY
Subjt:  RANCNLASLGRPRPPISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIY

Query:  HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQF GPNVN LTSSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG
Subjt:  HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

A0A6J1KGG8 RNA-binding protein 24-A1.7e-15494.72Show/hide
Query:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQH  GPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKN+GRSKGYGFVTFRDPESARRAC DPTPIIDGR
Subjt:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIY
        RANCNLASLGRPRPPISYGRLRPP V+VGGMQPNRG Y GNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASP IY
Subjt:  RANCNLASLGRPRPPISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIY

Query:  HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        HYGQLGQTVPGGHGYGAVHGY MPSPQI+QF GPNVN LTSSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG
Subjt:  HYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

SwissProt top hitse value%identityAlignment
D3Z4I3 RNA-binding protein 241.2e-2738.64Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPTVF
        DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG      +  R+  P   
Subjt:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPTVF

Query:  VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP----PYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTV-PGGHGYGAVHGYA
         G  Q +       FG   P  Y Y Q    P    P+   T       P   Y  + G  Y Q Y    +A+     Y Q      P   GY    GY+
Subjt:  VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP----PYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTV-PGGHGYGAVHGYA

Query:  MPSPQIVQFSGPNVNALTSS
            Q +  + P   A  ++
Subjt:  MPSPQIVQFSGPNVNALTSS

Q6GQD3 RNA-binding protein 24-A4.1e-2840.8Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPTVF
        DTTYTK+FVGGL + T   ++R+YFE FG+I EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG      +  R+  P   
Subjt:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPTVF

Query:  VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGY--GAVHGYAMPS
         G  Q +       FG   P  Y Y Q    P        P        Y  +    Y Q      +A+   Y Y       P   GY   A +GYA+P 
Subjt:  VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGY--GAVHGYAMPS

Query:  P
        P
Subjt:  P

Q76LC6 RNA-binding protein 243.5e-2740.29Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLG-RPR---PPISYGRLRP
        DTTYTK+FVGGL + T   ++R+YFE FGEI EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG +PR   P  ++G  + 
Subjt:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLG-RPR---PPISYGRLRP

Query:  PTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGG--YNPFVGQQYLQIYGVPGSASPTIY-HYGQLGQTVPGGHGYGAVHG
           F+   +P          Y  P  Y Y Q    P        P          Y  + G  Y Q      +A+   Y  Y         G+   A +G
Subjt:  PTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGG--YNPFVGQQYLQIYGVPGSASPTIY-HYGQLGQTVPGGHGYGAVHG

Query:  YAMPSP
        YAM  P
Subjt:  YAMPSP

Q9BX46 RNA-binding protein 247.1e-2839.09Show/hide
Query:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPTVF
        DTTYTK+FVGGL + T   ++R+YFE FGEI EAVVITD+ TG+S+GYGFVT  D  +A RAC DP PIIDGR+AN NLA LG      +  R+  P   
Subjt:  DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGRLRPPTVF

Query:  VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP----PYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTV-PGGHGYGAVHGYA
         G  Q +       FG   P  Y Y Q    P    P+   T       P   Y  + G  Y Q Y    +A+     Y Q      P   GY    GY 
Subjt:  VGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYP----PYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTV-PGGHGYGAVHGYA

Query:  MPSPQIVQFSGPNVNALTSS
            Q +  + P   A  ++
Subjt:  MPSPQIVQFSGPNVNALTSS

Q9M1S3 Probable RNA-binding protein ARP15.2e-3144.55Show/hide
Query:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPI
        ++S  +N  FGDT  TKVFVGGLAW+T  E M  +F ++G+ILEAV+I+DK T RSKGYGFVTF+D ++A RAC D TPII+GRRANCNLASLG      
Subjt:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPI

Query:  SYGRLR-PPTVFVGGMQPNRGT-----YIGNFG-YQQPVSYAYQQ-----GLAYPPYGYATYGPEYVYPQGGYNPFVGQ--------QYLQIYGVPGS-A
          GRLR  PT+      P  G      ++GN   +  P  +  QQ       A P YGY +    YV P   +N  VG          Y Q+   P S  
Subjt:  SYGRLR-PPTVFVGGMQPNRGT-----YIGNFG-YQQPVSYAYQQ-----GLAYPPYGYATYGPEYVYPQGGYNPFVGQ--------QYLQIYGVPGS-A

Query:  SPTIYHYGQLG
         P  YH+   G
Subjt:  SPTIYHYGQLG

Arabidopsis top hitse value%identityAlignment
AT1G20880.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.7e-9061.21Show/hide
Query:  SSSSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRP
        S  SSGF  LNSPFGDTT+TKVFVGGLAWETQSET+RR+F+Q+G+ILEAVVITDKNTGRSKGYGFVTFRDPE+ARRAC DPTPIIDGRRANCNLASLGR 
Subjt:  SSSSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRP

Query:  RPPISY-------GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYG
        RPP+ Y       GR+RPP+ +VG +Q  RG + G+  Y QP +Y YQQG+ Y PYG   YGP+Y+Y   QG Y P++GQQYLQ+YGVPG+ +   Y YG
Subjt:  RPPISY-------GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYG

Query:  QLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        QL  T+PG HGY A  GY+ P   ++Q          +SPM  IQ+PYPS  P+    Q + +V +P Q++Q SGSDQT+G
Subjt:  QLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

AT1G20880.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.7e-9061.21Show/hide
Query:  SSSSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRP
        S  SSGF  LNSPFGDTT+TKVFVGGLAWETQSET+RR+F+Q+G+ILEAVVITDKNTGRSKGYGFVTFRDPE+ARRAC DPTPIIDGRRANCNLASLGR 
Subjt:  SSSSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRP

Query:  RPPISY-------GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYG
        RPP+ Y       GR+RPP+ +VG +Q  RG + G+  Y QP +Y YQQG+ Y PYG   YGP+Y+Y   QG Y P++GQQYLQ+YGVPG+ +   Y YG
Subjt:  RPPISY-------GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY--PQGGYNPFVGQQYLQIYGVPGSASPTIYHYG

Query:  QLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
        QL  T+PG HGY A  GY+ P   ++Q          +SPM  IQ+PYPS  P+    Q + +V +P Q++Q SGSDQT+G
Subjt:  QLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG

AT1G22330.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-4745.32Show/hide
Query:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRP--
        S++ +  SPFGDTT+TKVFVGGLAWET ++ MRRYF+QFGEILEAV+ITDK TG+SKGYGFVTFRD +SA RA ADP P+IDGR+ANCN+AS GRPRP  
Subjt:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRP--

Query:  PISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQ-QYL--QIYGVPGSASPTI-------YHYGQ
        P   G+   P+ + GG Q +        G   PV  A    L YP YGY TY  EY Y Q  YN  + Q QY   Q+YG  G+ SP+        Y+Y Q
Subjt:  PISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQ-QYL--QIYGVPGSASPTI-------YHYGQ

Query:  LGQTVPG-GHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIP---APVAAQPQFVVHSPSQFVQGSG
             P   H     + +     Q  Q   P+ ++    P   ++AP PS +P    P+++  +   H+P Q  +  G
Subjt:  LGQTVPG-GHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIP---APVAAQPQFVVHSPSQFVQGSG

AT1G76460.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-10464.38Show/hide
Query:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR
        MAYQ + G        S   +LNSPFGDTT+TKVFVGGLAWETQSET+R++FEQ+GEILEAVVI DKNTGRSKGYGFVTFRDPE+ARRACADPTPIIDGR
Subjt:  MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGR

Query:  RANCNLASLGRPRPPISY-------GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY--PQGGYNPFVGQQYLQIYGV
        RANCNLASLGRPRPP+ Y       GRLRP + ++G +Q  RG+ IGN+ YQQP+ Y YQQG+ Y PYG   YGPEY+Y   QG Y+P++GQQYLQ+YGV
Subjt:  RANCNLASLGRPRPPISY-------GRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVY--PQGGYNPFVGQQYLQIYGV

Query:  PGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTS
        PG+ +  +Y YGQL QT+P GHGY AV GY++P   I+Q  GP V+ +T+S MP +QAPYPSGIP P   Q   +VHSP QF+Q + SDQT+
Subjt:  PGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTS

AT1G78260.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-4648.81Show/hide
Query:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPR--P
        S + +  SPFGDTTYTKVFVGGLAWET ++ MRRYFEQFGEILEAV+ITDKNTG+SKGYGFVTFR+ +SA RA ADP P+IDGR+ANCN+AS GRPR  P
Subjt:  SSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPR--P

Query:  PISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGP-EYVYPQGGYNPFVG-----QQYLQIYG----VPGSASPTI----Y
        P   G+   P+ +  G      TY    G   P+  A    L YP YGY TY P ++ Y Q  YN  +      QQ  Q+YG     P S+  TI    Y
Subjt:  PISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGP-EYVYPQGGYNPFVG-----QQYLQIYG----VPGSASPTI----Y

Query:  HYGQLGQT--VPGGHGYGAVHGYAMPSPQIVQFSGPN--VNALTSSPMPTIQ
        +YG   Q   VP  H +     Y        +FS P+  V    SS  P +Q
Subjt:  HYGQLGQT--VPGGHGYGAVHGYAMPSPQIVQFSGPN--VNALTSSPMPTIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTATCAGCATATTACGGGTCCTAGTTCGATATCTGGATCAAGCTCGAGTTCTGGGTTCTTGAACTCTCCCTTTGGTGATACCACCTACACCAAGGTCTTTGTTGG
TGGGTTGGCCTGGGAGACTCAGAGTGAGACTATGAGGCGCTACTTTGAGCAGTTTGGGGAGATTCTTGAGGCTGTTGTCATAACGGATAAGAATACAGGGAGATCCAAAG
GATATGGTTTTGTGACTTTCCGGGATCCAGAGTCTGCTAGAAGAGCTTGCGCAGATCCTACTCCAATTATTGATGGCAGGCGAGCAAATTGTAATCTGGCTTCACTTGGC
CGGCCTCGGCCACCTATATCTTATGGACGTTTAAGACCGCCTACCGTGTTTGTTGGAGGCATGCAACCCAACCGGGGAACTTATATCGGAAATTTTGGCTATCAACAACC
GGTTTCATATGCTTATCAGCAAGGGCTTGCATATCCTCCTTATGGTTATGCTACTTATGGACCTGAGTATGTCTACCCGCAGGGTGGATATAACCCTTTTGTGGGTCAGC
AATACCTGCAGATTTATGGGGTACCTGGGTCAGCAAGCCCTACTATTTATCATTATGGACAATTAGGTCAAACAGTCCCTGGTGGTCATGGATATGGAGCAGTACATGGA
TATGCAATGCCAAGTCCTCAGATCGTGCAGTTTAGTGGTCCTAATGTCAATGCATTAACATCTTCTCCAATGCCTACAATTCAGGCCCCGTATCCTTCAGGGATTCCAGC
ACCTGTTGCAGCACAACCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTAGCGGTTCTGACCAAACATCTGGGTGA
mRNA sequenceShow/hide mRNA sequence
CCGCCGCCCTCCGCCGCCTCCCCCACCCTCCCCTCTCCGGCGCCGCCACCTCCTCCTCCACCTTCGTATTCGTATCTTCCATTATTATTATTATGATCACAATACTCCTT
CTTCTTCCAGATTCCCTTTCCCTCTTCCCACTTTTTCCCCTTACAAATCCACCATCTTCCTACGGCCCTTAGATCTCTCTCTCTCTCTCTCTTTCCCTTCCATCACCGAC
CTCCCCTTCCCCTCACCCCTGTTCCTCTCTGGCCCATCTTTCTTTCTCCTTCGTTTCCTAGGGTTTCCCTTTCTAATTATGATCATTCTCGTTGGCCTTGATCATTCCTC
TTCTGCCTTCCTTTCCCTTTTTCCTCTCTCTCTTCATCACTATTCTCCCACCCTTTTCTTCCCCTTCCAATCCCTTTCGGTTTCCTCCTGATCCTCTCTGTATATCCCCT
CAGTTTCTCAAGGGTTTTCCTAGGGGTTTGCTTTTCCTATGTGGGTTTCCTCTCTAATCCTCCTCTTCTCTTCCACTTGATCCAATCTTACTCCCCCTCTGTGCCTCTGT
TTATATTTGTATCCCGGGGGTTCAATTCTTTTACTTTTCTCTCTTTTGTTCTTGAGTTTCTCCATTTCTAATGGCTTATCAGCATATTACGGGTCCTAGTTCGATATCTG
GATCAAGCTCGAGTTCTGGGTTCTTGAACTCTCCCTTTGGTGATACCACCTACACCAAGGTCTTTGTTGGTGGGTTGGCCTGGGAGACTCAGAGTGAGACTATGAGGCGC
TACTTTGAGCAGTTTGGGGAGATTCTTGAGGCTGTTGTCATAACGGATAAGAATACAGGGAGATCCAAAGGATATGGTTTTGTGACTTTCCGGGATCCAGAGTCTGCTAG
AAGAGCTTGCGCAGATCCTACTCCAATTATTGATGGCAGGCGAGCAAATTGTAATCTGGCTTCACTTGGCCGGCCTCGGCCACCTATATCTTATGGACGTTTAAGACCGC
CTACCGTGTTTGTTGGAGGCATGCAACCCAACCGGGGAACTTATATCGGAAATTTTGGCTATCAACAACCGGTTTCATATGCTTATCAGCAAGGGCTTGCATATCCTCCT
TATGGTTATGCTACTTATGGACCTGAGTATGTCTACCCGCAGGGTGGATATAACCCTTTTGTGGGTCAGCAATACCTGCAGATTTATGGGGTACCTGGGTCAGCAAGCCC
TACTATTTATCATTATGGACAATTAGGTCAAACAGTCCCTGGTGGTCATGGATATGGAGCAGTACATGGATATGCAATGCCAAGTCCTCAGATCGTGCAGTTTAGTGGTC
CTAATGTCAATGCATTAACATCTTCTCCAATGCCTACAATTCAGGCCCCGTATCCTTCAGGGATTCCAGCACCTGTTGCAGCACAACCACAGTTCGTTGTTCATTCTCCT
TCTCAGTTTGTACAAGGTAGCGGTTCTGACCAAACATCTGGGTGAGGAGTTGATCAGGTATCCATAGATTGCAGCAGGACTTAGAGCAGCGGAACTGCTACTTGAGTGGC
GGGCTTCGGATCTAGCCTTGCAAATAATTTATCATGCATTCTAGAGGTCATAGTCATGCTCACCAGAGACGTCAGATGGTCTTGAGTCGCTCCAGATGGTGGAGAAGGAA
TATGGAAGATGAAGGCTGCTCTTCCTCTAAGACCTTTCTTCTTCCCCAGTGTTTATAAACTTTTATACACTACCGACGCTCTGGATGAGCGGCAGGTAGTCATGGATTGA
TTGATGGATGCTTGAATCGGTTTTAAGCATCTATTTAGGAATAAAAACGTGTAAAAAGAAGTCAAAATTAGAATCAACATATGATTCTTTTATAGTAAACTCCCAGCATT
TTGGGTGTGTATAGGAAGTCTCTGGTGCTTTGTGTGGTCGTGGGTCAATCATCATCTTGGTACTAATATATGATTTCATAAGTTCATGTGCATATTAGTTGTTAGGATTT
ATTGTAATTTGGAACTTCCATAATTTGGATATCTTTCGAAGCCTGACTGACTTCATAACAACGAAGCAGCTTCAGGTTCTATCAGGAAGATCGAATTGCTGATTTTTCAT
TTTAATACCCCTCGATGGAGTGCTCGATTCGGATTGGCTGCATCAGAGGATGTAAAGTTTTTAGTTCTTCCTTCACAGTGTCTGGACAATCCTTAGGTTTTGAAAACATT
CTGTTTATTCATTGTGTTTGTTGTGGGAACATTATTTTTTCTTTTTCTTTTTCTTTTTTACCTTCATTATTTATTAGCTGGTTCTGTTTTCTTCTATTTGGGTGGAGGTT
GAAGGGAATGTGTCAATGGATTCCAAACATTGGATGGAAGCTTTAGGACTTATCAAACCATTATTGTGAAATGGATGCCATGAAAGAACCATAAAATGACTTTGAAAGTG
CAAAGTTTTGGATGATGAGATGGAAAAAAAAGAGTCATGGCTTGGCTTTTCCTTGCAGATTCTTTTTTTAATTATCTTTTGGGCTGTGATTCACAAGCTTGTTTCTTTCT
CCTTGTGGCACTAAATGATGA
Protein sequenceShow/hide protein sequence
MAYQHITGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLG
RPRPPISYGRLRPPTVFVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHG
YAMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG