; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy01g020030 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy01g020030
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionribosome production factor 1-like
Genome locationChr01:41433079..41437947
RNA-Seq ExpressionLcy01g020030
SyntenyLcy01g020030
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR044281 - U3 snoRNP protein/Ribosome production factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]1.8e-16890.66Show/hide
Query:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH
        MGEEKK + +IPSMIKNKEKR + H NLKHQKKLEKRKR KARDAAEKQA+ELGEE P RK+P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK  
Subjt:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH

Query:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPT
        I PKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKL
         H+PELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIFESKENKK ADSK KSKD KGEKV QQ+V+ RLQECGPRFTMKL
Subjt:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022155906.1 ribosome production factor 1-like [Momordica charantia]7.9e-16990.99Show/hide
Query:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH
        MGEEKK KRD+IPSMIKNKEKRK+ H NLK QKKLEKRKR KARDA+EKQA+ELGEEPP R +P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK 
Subjt:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH

Query:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNP
        H  PKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMK
        TSHEPELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIF+SKENKK ADSKS SKD KGEKV QQ+V+ RLQECGPRFTMK
Subjt:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_022156150.1 ribosome production factor 1-like [Momordica charantia]1.0e-16890.69Show/hide
Query:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH
        MGEEKK KRD+IPSMIKNKEKRK+ H NLK QKKLEKRKR KARDA+EKQA+ELGEEPP R +P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK 
Subjt:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH

Query:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNP
        H  PKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMK
        TSHEPELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKK ADSKS SKD KGEKV +Q+V+ RLQECGPRFTMK
Subjt:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]6.3e-16688.86Show/hide
Query:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH
        MGEEKK + ++PS IKNKEKR + H NLKHQKKLEKRKR KARDAAEKQA+ELGEE P RK+P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK  
Subjt:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH

Query:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPT
        I PK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKL
         H+PELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIFESKENKK ADSK KSK  KGEKV QQ+V+ RLQECGPRFTMKL
Subjt:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]9.6e-16789.46Show/hide
Query:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH
        MGEE K R +IPSMIKNKEKR + H NLK+QKKLEKRKR KARDAAEKQA+ELGEE P RK+P TIENTREVDET+CKPDDEELFAGNDADEFSSIIK  
Subjt:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH

Query:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPT
        I PKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKL
        SH+PELVLTNF TR+GLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIFESKENKK ADSK KSKD KGEKV QQ+V+ RLQECGPRFTMKL
Subjt:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein3.0e-16688.86Show/hide
Query:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH
        MGEEKK + ++PS IKNKEKR + H NLKHQKKLEKRKR KARDAAEKQA+ELGEE P RK+P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK  
Subjt:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH

Query:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPT
        I PK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKL
         H+PELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIFESKENKK ADSK KSK  KGEKV QQ+V+ RLQECGPRFTMKL
Subjt:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A1S3B854 ribosome production factor 1 isoform X18.5e-16990.66Show/hide
Query:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH
        MGEEKK + +IPSMIKNKEKR + H NLKHQKKLEKRKR KARDAAEKQA+ELGEE P RK+P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK  
Subjt:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH

Query:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPT
        I PKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKL
         H+PELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIFESKENKK ADSK KSKD KGEKV QQ+V+ RLQECGPRFTMKL
Subjt:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A5A7UHC7 Ribosome production factor 1 isoform X18.5e-16990.66Show/hide
Query:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH
        MGEEKK + +IPSMIKNKEKR + H NLKHQKKLEKRKR KARDAAEKQA+ELGEE P RK+P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK  
Subjt:  MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHH

Query:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPT
        I PKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKL
         H+PELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIFESKENKK ADSK KSKD KGEKV QQ+V+ RLQECGPRFTMKL
Subjt:  SHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DPH5 ribosome production factor 1-like5.0e-16990.69Show/hide
Query:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH
        MGEEKK KRD+IPSMIKNKEKRK+ H NLK QKKLEKRKR KARDA+EKQA+ELGEEPP R +P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK 
Subjt:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH

Query:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNP
        H  PKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMK
        TSHEPELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKK ADSKS SKD KGEKV +Q+V+ RLQECGPRFTMK
Subjt:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

A0A6J1DT48 ribosome production factor 1-like3.8e-16990.99Show/hide
Query:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH
        MGEEKK KRD+IPSMIKNKEKRK+ H NLK QKKLEKRKR KARDA+EKQA+ELGEEPP R +P TIENTREVDETVCKPDDEELFAGNDADEFSSIIK 
Subjt:  MGEEKK-KRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKH

Query:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNP
        H  PKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYA AKDFTSLMVVHTSRRKLDGLLI+GLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  HISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMK
        TSHEPELVLTNF TR+GLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIF+SKENKK ADSKS SKD KGEKV QQ+V+ RLQECGPRFTMK
Subjt:  TSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
        LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Subjt:  LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

SwissProt top hitse value%identityAlignment
Q5R631 Ribosome production factor 19.3e-7248.14Show/hide
Query:  SMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF
        S IKNKE+R   H      K+ ++++++ A+   +K+   LG++ P + VP TI+N R  DET   P+DEE+      DEF+S      SPK+LITT   
Subjt:  SMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIPN+H Y R    LKKII   IA+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK
         TR+G  +GR+  SLFP +P F GR+V TFHNQRD++FFR HRYIF S+  KKV                       +QE GPRFT+KL SLQ GTFDSK
Subjt:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Q6IQU6 Ribosome production factor 13.9e-7047.83Show/hide
Query:  SMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF
        S IKNK++R      LK +K+ +KR  +K +   E++A++  ++ P ++VP TIEN R  DET   P+DEE+      DEFS+      +PKVLITT   
Subjt:  SMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I   I++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++K  G NPT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK
         TR+G  +GRL  +LFP DP F GR+V TFHNQRDF+FFR HRYIF  K  KKV                       +QE GPRFT+KL SLQ GTFDSK
Subjt:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHK-PEMDTSRRRFFL
         GEYEWVHK  EMD+SRR+F L
Subjt:  GGEYEWVHK-PEMDTSRRRFFL

Q7TND5 Ribosome production factor 13.5e-7147.52Show/hide
Query:  SMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF
        S IKNK++R   H      K+ ++++++ A+   +K+   LG++ P + VP TI+N R  DET   P+DEE+      DEF+S      SPK+LITT   
Subjt:  SMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIP++H Y R    LKKII   IA+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK
         TR+G  +GR+  SLFP +P F GR+V TFHNQRD++FFR HRYIF+S+  KKV                       +QE GPRFT+KL SLQ GTFDSK
Subjt:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Q8AVP1 Ribosome production factor 13.5e-7147.55Show/hide
Query:  SMIKNKEKRKQCHENLKHQKKLEK----RKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLIT
        S IKNK++R+     LK +K+ EK    +KR K R+A       LG++ P + VP TIEN R  DET   P DEE+      DEF+       +PK+LIT
Subjt:  SMIKNKEKRKQCHENLKHQKKLEK----RKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV
        T          F  +L S+IPN+  Y R    LKKII   +++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++K  G  PT H+PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELV

Query:  LTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQHGT
        L NF TR+G  +GR+  SL+P DP+F GR+V TFHNQRD++FFR+HRY+F+S+  KKV                       +QE GPRFT+KL SLQ GT
Subjt:  LTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK-PEMDTSRRRFFL
        FDSK GEYEWVHK  EMDTSRR+F L
Subjt:  FDSKGGEYEWVHK-PEMDTSRRRFFL

Q9H9Y2 Ribosome production factor 12.1e-7147.83Show/hide
Query:  SMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF
        S IKNK++R   H      K+ ++++++ A+   +K+   LG++ P + VP TI+N R  DET   P+DEE+      DEF+S      SPK+LITT   
Subjt:  SMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF
                  +L +VIPN+H Y R    LKKII   IA+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHG-NPTSHEPELVLTNF

Query:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK
         TR+G  +GR+  SLFP +P F GR+V TFHNQRD++FFR HRYIF S+  KKV                       +QE GPRFT+KL SLQ GTFDSK
Subjt:  ITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHKP-EMDTSRRRFFL
         GEYEWVHKP EMDTSRR+F L
Subjt:  GGEYEWVHKP-EMDTSRRRFFL

Arabidopsis top hitse value%identityAlignment
AT1G63780.1 Ribosomal RNA processing Brix domain protein2.2e-3637.14Show/hide
Query:  DEFSSIIKHHISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLR
        DE+++  +    PK+L+TT R  S     F  EL  V PN+    RG+  + +IIE A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R
Subjt:  DEFSSIIKHHISPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLR

Query:  KDI---KNHGNPTSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVT
         DI   K+ G      P L+  NF T++G RVG +++ +FP  P    +R+VTF NQ D++ FR+H Y      +K     KS                 
Subjt:  KDI---KNHGNPTSHEPELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVT

Query:  RLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
         L+E GPRF ++L  ++ GT +    E EWV +P M+TS++R F+
Subjt:  RLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

AT4G01560.1 Ribosomal RNA processing Brix domain protein1.4e-13671.04Show/hide
Query:  KKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPK
        +K+  ++PSMIKNK+KR + +   KH+KKLEK+K+++ARDAAEK+A+ELGEEPP + +P TIENTRE DETVC+PDDEELFA  DADEF+ +++  I+PK
Subjt:  KKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPK

Query:  VLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPTSHEP
        VL+TTCRFNST GPA ISELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLI+GLP GPTAHFK+SN+VLRKDIKNHGNPTSH+P
Subjt:  VLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPTSHEP

Query:  ELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQ
        ELVL NF TR+G RVGR  QSLFP DPNFRGRRVVTFHNQRDF+FFRHHRYIFE+KE+             K +K  ++ +  RLQECGPRFT+KL++LQ
Subjt:  ELVLTNFITRIGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQ

Query:  HGTFDSKGGEYEWVHKPEMDTSRRRFFL
        HGTFD+KGGE+EWVHKPEMDTSRRRFFL
Subjt:  HGTFDSKGGEYEWVHKPEMDTSRRRFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGGAGAAAAAGAAGAGGGATGTCATCCCATCAATGATAAAGAACAAGGAAAAGAGAAAGCAGTGTCACGAGAACCTCAAGCACCAGAAGAAGCTTGAGAAACG
CAAGAGGGTCAAGGCTCGTGACGCTGCTGAAAAGCAAGCTATTGAACTTGGAGAAGAACCTCCTGCTAGGAAGGTTCCTCACACCATCGAGAACACCAGGGAGGTTGATG
AGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCGGGAAATGATGCTGATGAATTTAGTTCCATCATAAAGCACCACATTTCGCCAAAAGTTCTAATAACTACTTGC
CGTTTTAACTCTACTATTGGACCTGCTTTTATATCAGAGTTACTTTCAGTGATTCCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATAGAATA
TGCAATTGCCAAGGACTTCACTTCTTTGATGGTTGTTCATACGAGTCGGAGAAAATTGGATGGCCTTTTAATTGTTGGCTTACCTGAGGGACCGACTGCCCATTTTAAGA
TTTCAAATGTTGTCTTACGAAAGGATATTAAGAATCATGGAAATCCAACCAGCCATGAGCCAGAGCTTGTATTGACTAACTTCATAACACGCATAGGTCTACGTGTTGGA
AGATTAATACAATCACTATTCCCTCAAGATCCTAATTTTCGTGGTCGGCGAGTCGTAACTTTTCACAACCAACGGGATTTTGTATTCTTCCGGCATCACCGTTACATTTT
TGAAAGCAAGGAAAATAAAAAAGTGGCCGACTCAAAAAGTAAATCCAAAGATATCAAGGGAGAGAAAGTTTCTCAGCAAAGAGTGGTCACACGACTTCAGGAATGCGGTC
CTCGTTTCACAATGAAATTGATCAGTCTGCAGCATGGGACTTTCGATTCTAAAGGCGGGGAATATGAGTGGGTTCATAAGCCTGAAATGGATACAAGCCGCAGAAGATTT
TTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
CTCTTTCGTTGCAACTCTTGCGCGCCTCTACGCGGCTTGAGTTTGCTGCTCTTGCTCGTCTCTACCAGTCGATTTGCTCGACGCTCGCCTCTGTCGACTATACGAACTGT
ACTAGTTTTCGTTGTGCCTTAACTCGTGGTTGCCTTTCTCCTTGATGCCCTCTCGAGATACAGCGTGGTGAACAAAGAGAAACAAATGGGAGAGGAGAAAAAGAAGAGGG
ATGTCATCCCATCAATGATAAAGAACAAGGAAAAGAGAAAGCAGTGTCACGAGAACCTCAAGCACCAGAAGAAGCTTGAGAAACGCAAGAGGGTCAAGGCTCGTGACGCT
GCTGAAAAGCAAGCTATTGAACTTGGAGAAGAACCTCCTGCTAGGAAGGTTCCTCACACCATCGAGAACACCAGGGAGGTTGATGAGACTGTTTGCAAACCTGATGATGA
AGAGCTATTTGCGGGAAATGATGCTGATGAATTTAGTTCCATCATAAAGCACCACATTTCGCCAAAAGTTCTAATAACTACTTGCCGTTTTAACTCTACTATTGGACCTG
CTTTTATATCAGAGTTACTTTCAGTGATTCCAAATGCACATTACTACAAGAGAGGAACTAACGATTTGAAGAAGATTATAGAATATGCAATTGCCAAGGACTTCACTTCT
TTGATGGTTGTTCATACGAGTCGGAGAAAATTGGATGGCCTTTTAATTGTTGGCTTACCTGAGGGACCGACTGCCCATTTTAAGATTTCAAATGTTGTCTTACGAAAGGA
TATTAAGAATCATGGAAATCCAACCAGCCATGAGCCAGAGCTTGTATTGACTAACTTCATAACACGCATAGGTCTACGTGTTGGAAGATTAATACAATCACTATTCCCTC
AAGATCCTAATTTTCGTGGTCGGCGAGTCGTAACTTTTCACAACCAACGGGATTTTGTATTCTTCCGGCATCACCGTTACATTTTTGAAAGCAAGGAAAATAAAAAAGTG
GCCGACTCAAAAAGTAAATCCAAAGATATCAAGGGAGAGAAAGTTTCTCAGCAAAGAGTGGTCACACGACTTCAGGAATGCGGTCCTCGTTTCACAATGAAATTGATCAG
TCTGCAGCATGGGACTTTCGATTCTAAAGGCGGGGAATATGAGTGGGTTCATAAGCCTGAAATGGATACAAGCCGCAGAAGATTTTTCTTGTGACCTGCTGAATGTGGTT
CTTTTCATCCTTCATTTCCGTGGAGTAAAATTTGTTCGACTCAAGTTATCTTATTATGGTAAGCAGATAGTAAATTATATTTCATTTTTATTTCTGTTGGGCGGTTGGTT
TATCGTAGTTAGAGACTGTTTTGTTTTTATTTTATTAACAACTTGTTATCTACTTGAAAAACAATTTTTTTAAATCCTAACCAAATTTATCAAAACAAACATTACCATGG
TGAAAATATTAAAATTCTGTGAATTTTTTGACGATGAAATATTGTAGGATCACGTGGCTGTTTATTAGTTGAGAAAGCTGCCTTGATACTCACTAAAATTTTTGCAGCAT
CGTTTCAAAGTTGAGTTTATTTTATAGGTAAAAATTAGTCGAATTTTTTTAACCATTTGGAGAGAAGATTATGTATTCAGTTTCCTTCTTATCTTAGGGGTTTAGCTTCA
CAATCAAGTGAATGCAGATTAGCTATTTAGAAGTAGTAACATTTATTAGTTTCTATTTTATTGGTTTTTGTATTAGGGTACGGGGTGCACTTTGGGTTGTGTGAAAAAAA
ATTGGTTAGATCCTGAACCTGGGAAAATATTGCGGGGTTTTCTTTAGTATGGGTAAAAAAGATGGTCAATCGACTTAGTTCTCACCTCCAAGAGGACATTCGCAATTGTC
ACCTCAAGGAGTCTTCGAGATTGGAATAAGCATTTGTCAAACCACTATAAAAAAATTTTG
Protein sequenceShow/hide protein sequence
MGEEKKKRDVIPSMIKNKEKRKQCHENLKHQKKLEKRKRVKARDAAEKQAIELGEEPPARKVPHTIENTREVDETVCKPDDEELFAGNDADEFSSIIKHHISPKVLITTC
RFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYAIAKDFTSLMVVHTSRRKLDGLLIVGLPEGPTAHFKISNVVLRKDIKNHGNPTSHEPELVLTNFITRIGLRVG
RLIQSLFPQDPNFRGRRVVTFHNQRDFVFFRHHRYIFESKENKKVADSKSKSKDIKGEKVSQQRVVTRLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRF
FL