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Lcy02g001070 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy02g001070
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptiontranscription factor TRY-like
Genome locationChr02:1442579..1444209
RNA-Seq ExpressionLcy02g001070
SyntenyLcy02g001070
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016832.1 Transcription factor TRY [Cucurbita argyrosperma subsp. argyrosperma]3.5e-3387.95Show/hide
Query:  MIFQVLLSFFEICDLLSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG
        MIF+VLL F+E C +  LTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF +RRRG
Subjt:  MIFQVLLSFFEICDLLSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG

KAG7035734.1 Transcription factor TRY [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2984.34Show/hide
Query:  MIFQVLLSFFEICDLLSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG
        MIF   L F        LTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFA RRRG
Subjt:  MIFQVLLSFFEICDLLSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG

XP_022996343.1 transcription factor TRY-like [Cucurbita maxima]6.8e-2994.12Show/hide
Query:  LSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG
        L   EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFA RRRG
Subjt:  LSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG

XP_023534743.1 transcription factor TRY-like isoform X1 [Cucurbita pepo subsp. pepo]1.8e-2984.34Show/hide
Query:  MIFQVLLSFFEICDLLSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG
        MIF   L F        LTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFA RRRG
Subjt:  MIFQVLLSFFEICDLLSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG

XP_038875738.1 transcription factor TRY [Benincasa hispida]3.1e-2992.75Show/hide
Query:  LLSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG
        LL   EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF +RRRG
Subjt:  LLSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG

TrEMBL top hitse value%identityAlignment
A0A5D3C2B2 Transcription factor TRY4.3e-2992.65Show/hide
Query:  LSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG
        L   EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF +RRRG
Subjt:  LSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG

A0A6J1H5Q3 transcription factor TRY-like3.3e-2994.12Show/hide
Query:  LSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG
        L   EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFA RRRG
Subjt:  LSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG

A0A6J1IC17 transcription factor TRY-like4.3e-2992.65Show/hide
Query:  LSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG
        L   EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF +RRRG
Subjt:  LSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG

A0A6J1KAI4 transcription factor TRY-like3.3e-2994.12Show/hide
Query:  LSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG
        L   EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFA RRRG
Subjt:  LSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG

I6NF75 R3 MYB transcription factor4.3e-2992.65Show/hide
Query:  LSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG
        L   EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF +RRRG
Subjt:  LSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG

SwissProt top hitse value%identityAlignment
B3H4X8 MYB-like transcription factor TCL21.1e-1861.9Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +  + +RR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

D3GKW6 MYB-like transcription factor TCL11.6e-1760.94Show/hide
Query:  SLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAER
        S  EVSS +W+FI MT QEEDLI RM++L+GDRWDLIA R+ GR+ +EIERYWIM + + F+ +
Subjt:  SLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAER

O22059 Transcription factor CPC7.9e-2068.25Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        EVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   FA RRR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

Q84RD1 MYB-like transcription factor ETC26.7e-1965.08Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        EVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + + F+ +RR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

Q8GV05 Transcription factor TRY2.0e-2374.6Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        EVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGFA++RR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

Arabidopsis top hitse value%identityAlignment
AT2G30420.1 Homeodomain-like superfamily protein4.7e-2065.08Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        EVSS  W+FI+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + + F+ +RR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

AT2G30424.1 Homeodomain-like superfamily protein8.1e-2061.9Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        EV+S +W+FI MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +  + +RR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

AT2G30432.1 Homeodomain-like superfamily protein1.2e-1860.94Show/hide
Query:  SLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAER
        S  EVSS +W+FI MT QEEDLI RM++L+GDRWDLIA R+ GR+ +EIERYWIM + + F+ +
Subjt:  SLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAER

AT2G46410.1 Homeodomain-like superfamily protein5.6e-2168.25Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        EVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   FA RRR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

AT5G53200.1 Homeodomain-like superfamily protein1.4e-2474.6Show/hide
Query:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        EVSS  W+FI MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGFA++RR
Subjt:  EVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTTCAAGTCCTACTTTCCTTTTTTGAAATTTGTGACTTATTGTCTCTAACAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGA
TCTTATCCATAGAATGCATAAGCTGATTGGAGATAGGTGGGATCTGATAGCAGGCAGAATTCCGGGGCGTAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACC
TTGAAGGGTTTGCAGAGAGAAGAAGGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATCTAAGGAAGCATGTGAAGAAAGGGAAGTAGAAGGGAGGGAAGGAAAAGATGAATACAAATTTCTGAACAGACAAAATAATTTTGTATTCATTTGCATGTCCTTGCTGA
GGGGGGGCTGGTGCAATTGGAATACTGAGCACTAATTCAGGATAAGATGTGTCATATCTCTCTCCCTATCTGAATTTGTGTGTGCAGTTGGGAAGAAGGTTAGCTGAACT
GAACACAGGCACTAGACCACTTCCCCAGGTCCCCAACTACCAGTTGAGTATTATATTTTGGGTGAGATTAGAACCCTCTGCACTGCCTAAAAACAATCACAGTGGAGAAA
CAAGGTAACATATCAGAGAGTTTTGGGCACCCATTTCAACTTTAGTTGGTGCCTTTCTCACCTGTATTAAACTAAACTATTGCCCATGTTTATCTGTCTGCTTATCTGTT
TTTAGTTGGAGCTGAGCTTATATCCACACTTTTTCAGATCTCTTAATCCTAAAAGAATGAAACTAGCTACTAGATGACCTTCCCTAGAACAGCTCTTTCTCTTTCTCCTT
CTCTCTCTAAGATTTCAATATTTTAATCTTGTCTTTTATCCCTTTGTAAGTTGTCAACTACAAGTCTACCAACCCAACAAGTCAACCAACAAACTTACTTCCCAAAGTTT
GGTGGGCAGAAGAAAATACAGGCATTCACATAAACTTAAATTTCCCTCTGGAAGTTTCAAAGCTCTCTATCATAGTTTTTCCTAAAATTCTTTCATCCCCAGTTCTCTAT
CTTCCTGTTTTTGTTCTGCCTCTGCTCTTTGGGGAGACATGGACAATCATCGTCACCAGAAACAAGCTAAAATCACTCCACTAGACTCTGAAGGTTTCTTTCATCAACTT
GATTTTCTATTTTCCATGTCCAATTACTCATCCTGAAGTTGGTCTCTCTCTTCTACCTTATTCTCTCACTTTTGGATGATATTTCAAGTCCTACTTTCCTTTTTTGAAAT
TTGTGACTTATTGTCTCTAACAGAAGTCAGCAGCACTAGGTGGCAGTTTATAACTATGACAGCACAAGAGGAAGATCTTATCCATAGAATGCATAAGCTGATTGGAGATA
GGTGGGATCTGATAGCAGGCAGAATTCCGGGGCGTAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACCTTGAAGGGTTTGCAGAGAGAAGAAGGGGATGAGAG
AGAAAGGGAGATGAAGGGTTTGGAGGAGAGAGAGAGAGAGATACAGGCAGTGAGGGGTCAGACAATTAGTCTTCAAAGGCTTCTGATGGGTTCTCTCCTTCCTTTTTTGT
GGTTCCCTGCTGATCTGATAATCATCTCCTAATAGCTTTAGTGTATTGCAAGTACCCCTTTTAAGAACACATGGTATGGAACTCAGCTATTTTTTATCAATCAAATAACA
CAGTAAAATTTATGATTCCAAATAAAAACTCAAACAAAGACTATGTTTTGT
Protein sequenceShow/hide protein sequence
MIFQVLLSFFEICDLLSLTEVSSTRWQFITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRG