CuGenDBv2

Gene ID	Lcy02g003680
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X2
Genome location	Chr02:4851283..4853770
RNA-Seq Expression	Lcy02g003680
Synteny	Lcy02g003680
Gene Ontology terms	NA
InterPro domains	IPR003772 - Large ribosomal RNA subunit accumulation protein YceD IPR044985 - Large ribosomal RNA subunit accumulation protein YceD homologue 2, chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008461873.1 PREDICTED: uncharacterized protein LOC103500366 [Cucumis melo]

2.6e-104

75.18

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Query:  MAEAGHLL-TARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK
        MAEAG L+ T RNINSISSSFNK A KS TQTFKIKASSKRNDISL                                                 RRS+K
Subjt:  MAEAGHLL-TARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK

Query:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR
        T RRLITISTSGSRWQGKWTCDYLLSL+DLNLEDLVED++KNAHVFINLCIEKHASFGFTVDG+I TSFTRKCCTCSLPYCREI ANFNVLVLSSNRANR
Subjt:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR

Query:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKS
        EIHLP+IGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSE CEKSQP VQ+IGAQNAASIDKRW RLLELRKS
Subjt:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKS

XP_011651803.2 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X1 [Cucumis sativus]

3.6e-106

75.27

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Query:  MAEAGHLL-TARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK
        MAEAGHL+ TARNINSISS+FNKAA KS+TQTFKIKASSKRNDISL                                                 RRS+K
Subjt:  MAEAGHLL-TARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK

Query:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR
        T RRLITIST+GSRWQGKWT DY+LSLQDLNLEDLVED+N NAHVFINLCIEKHASFGFTVDG+I TSFTRKCC CS PYCREINANFNVLVLSSNRANR
Subjt:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR

Query:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN
        EIHLP+IGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSE+CEKSQP VQ+IGAQNAASIDKRWSRLLELRKSN
Subjt:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN

XP_022983270.1 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X4 [Cucurbita maxima]

2.2e-103

74.55

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Query:  MAEAGHLLTARNINSISSSFNK-AALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK
        MAEAGHL+ A N+NSISSSFNK AA K ATQTFKIKASSKRNDISL                                                 RRSSK
Subjt:  MAEAGHLLTARNINSISSSFNK-AALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK

Query:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR
         PRRLITIST+GS WQGKW+CDYLLSLQD NLEDLVED++KNAHVFINLCIEKHASFGFTVDGKI TSFTRKCCTCS PYCREINANFNVLVLSSNRA R
Subjt:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR

Query:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN
        E  LPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQP VQ+IGAQNAASIDKRWSRLLELRKS+
Subjt:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN

XP_031738565.1 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic [Cucumis sativus]

9.4e-107

75.63

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Query:  MAEAGHLL-TARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK
        MAEAGHL+ TARNINSISSSFNKAA K +TQTFKIKASSKRNDISL                                                  RS+K
Subjt:  MAEAGHLL-TARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK

Query:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR
        T RRLITIST+GSRWQGKWTCDYLLSL+DLNLEDLVED+NKNAHVFINLCIEKHASFGFTVDG+I TSFTRKCC CS PYCREINANFNVLVLSSNRANR
Subjt:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR

Query:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN
        EIHLP+IGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSE+CEKSQP VQ+IGAQNAASIDKRWSRLLELRKSN
Subjt:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN

XP_038906104.1 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic [Benincasa hispida]

3.4e-104

74.91

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Query:  MAEAGHLLTARNINSISSSFNKAAL-KSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK
        MAE GHL+TARNINSISSSFNKAA  K ATQTFKI ASSKRNDISL                                                 RRS+K
Subjt:  MAEAGHLLTARNINSISSSFNKAAL-KSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK

Query:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR
        T RRLITISTSGSRWQGKWT DYLLSL+DLNLEDLVED++KNA VFINLCIEKHASFGFTVDGKI TSFTRKCCTCS PYCREINANFNVLVLSSNR NR
Subjt:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR

Query:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN
        EIHLP+IGGDDPSVIYVKPGLEADLDS VRDTIRLTTSTKDTCSELCEKSQP VQ+IGAQN ASIDKRWSRLLELRKSN
Subjt:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9P4 Uncharacterized protein

3.5e-115

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Query:  MAEAGHLL-TARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK
        MAEAGHL+ TARNINSISSSFNKAA K +TQTFKIKASSKRNDISLVKH+LL +    IF  S  +P   SS   F FH  I+    SF  L  ++  +K
Subjt:  MAEAGHLL-TARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK

Query:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR
        T RRLITIST+GSRWQGKWTCDYLLSL+DLNLEDLVED+N NAHVFINLCIEKHASFGFTVDG+I TSFTRKCC CS PYCREINANFNVLVLSSNRANR
Subjt:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR

Query:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN
        EIHLP+IGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSE+CEKSQP VQ+IGAQNAASIDKRWSRLLELRKSN
Subjt:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN

A0A1S3CFK7 uncharacterized protein LOC103500366

1.2e-104

75.18

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Query:  MAEAGHLL-TARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK
        MAEAG L+ T RNINSISSSFNK A KS TQTFKIKASSKRNDISL                                                 RRS+K
Subjt:  MAEAGHLL-TARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK

Query:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR
        T RRLITISTSGSRWQGKWTCDYLLSL+DLNLEDLVED++KNAHVFINLCIEKHASFGFTVDG+I TSFTRKCCTCSLPYCREI ANFNVLVLSSNRANR
Subjt:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR

Query:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKS
        EIHLP+IGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSE CEKSQP VQ+IGAQNAASIDKRW RLLELRKS
Subjt:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKS

A0A5D3C1F8 DUF177 domain-containing protein

1.2e-104

75.18

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Query:  MAEAGHLL-TARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK
        MAEAG L+ T RNINSISSSFNK A KS TQTFKIKASSKRNDISL                                                 RRS+K
Subjt:  MAEAGHLL-TARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK

Query:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR
        T RRLITISTSGSRWQGKWTCDYLLSL+DLNLEDLVED++KNAHVFINLCIEKHASFGFTVDG+I TSFTRKCCTCSLPYCREI ANFNVLVLSSNRANR
Subjt:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR

Query:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKS
        EIHLP+IGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSE CEKSQP VQ+IGAQNAASIDKRW RLLELRKS
Subjt:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKS

A0A6J1F8T8 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X2

4.4e-102

73.12

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Query:  MAEAGHLLTARNINSISSSFNKAAL-KSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK
        MAEAGHL+ A N+NSISSSFNKAA  K ATQ FKIKASSKRNDISL                                                 RRSSK
Subjt:  MAEAGHLLTARNINSISSSFNKAAL-KSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK

Query:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR
         PRRLITIST+GS WQG+W+CDYLLSLQD NLEDLVED++KNAHVFINLCIEKHASFGFTVDGKI TSF RKCCTCS PYCREINANFNVLVLSSNRA R
Subjt:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR

Query:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN
        E  LP+IGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQP VQ+IGAQNAASIDKRWSRLLELRKS+
Subjt:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN

A0A6J1J5E3 large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic isoform X4

1.1e-103

74.55

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Query:  MAEAGHLLTARNINSISSSFNK-AALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK
        MAEAGHL+ A N+NSISSSFNK AA K ATQTFKIKASSKRNDISL                                                 RRSSK
Subjt:  MAEAGHLLTARNINSISSSFNK-AALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSK

Query:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR
         PRRLITIST+GS WQGKW+CDYLLSLQD NLEDLVED++KNAHVFINLCIEKHASFGFTVDGKI TSFTRKCCTCS PYCREINANFNVLVLSSNRA R
Subjt:  TPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANR

Query:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN
        E  LPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQP VQ+IGAQNAASIDKRWSRLLELRKS+
Subjt:  EIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSN

SwissProt top hits

e value

%identity

Alignment

Q9C5M1 Large ribosomal RNA subunit accumulation protein YCED homolog 2, chloroplastic

1.2e-56

58.89

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Query:  SSKTPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNR
        SSKT +RLIT+S S  +W G W   Y +SL+DL L+DLVED   N+ V ++L +++HAS G +VDG+I+TS  RKC  CS  Y R I+ +F V +L S+R
Subjt:  SSKTPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNR

Query:  ANREIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRK
         NR   LPEIGGDDPSVIYV+PG EA+LDSLV+DTIRLTT  KD CS+ CEKS+P + ++G  N AS+DKRWSRLLEL+K
Subjt:  ANREIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRK

Arabidopsis top hits

e value

%identity

Alignment

AT3G19800.1 Protein of unknown function (DUF177)

8.6e-58

58.89

Show/hide

Query:  SSKTPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNR
        SSKT +RLIT+S S  +W G W   Y +SL+DL L+DLVED   N+ V ++L +++HAS G +VDG+I+TS  RKC  CS  Y R I+ +F V +L S+R
Subjt:  SSKTPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNR

Query:  ANREIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRK
         NR   LPEIGGDDPSVIYV+PG EA+LDSLV+DTIRLTT  KD CS+ CEKS+P + ++G  N AS+DKRWSRLLEL+K
Subjt:  ANREIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRK

AT3G19800.2 Protein of unknown function (DUF177)

8.6e-58

58.89

Show/hide

Query:  SSKTPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNR
        SSKT +RLIT+S S  +W G W   Y +SL+DL L+DLVED   N+ V ++L +++HAS G +VDG+I+TS  RKC  CS  Y R I+ +F V +L S+R
Subjt:  SSKTPRRLITISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNR

Query:  ANREIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRK
         NR   LPEIGGDDPSVIYV+PG EA+LDSLV+DTIRLTT  KD CS+ CEKS+P + ++G  N AS+DKRWSRLLEL+K
Subjt:  ANREIHLPEIGGDDPSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAGAAGCTGGGCACCTTCTAACAGCCAGAAATATCAACTCCATTTCAAGTTCATTCAATAAAGCAGCACTCAAATCTGCAACTCAAACATTCAAAATCAAA
GCTTCTTCAAAGAGAAATGACATCTCCTTGGTAAAACACCACCTCCTTTTCCTATCAGATTTCTGCATATTTCCATTTTCAATCACTCTTCCTTTTCGTCTCTCT
TCTTTCCAACAATTTCCTTTCCATTTCAAAATTTGGATCAGTCTCTCTAGTTTCTGGCTTCTACTTTGCTCTAGAAGAAGCAGCAAGACTCCACGGCGTCTGATC
ACAATATCGACATCGGGAAGCAGATGGCAGGGGAAGTGGACCTGTGATTACCTGCTTTCCCTGCAAGACCTAAACTTGGAAGACTTAGTAGAAGATGATAACAAA
AATGCACATGTCTTCATCAACCTCTGTATTGAGAAGCATGCAAGTTTCGGGTTCACTGTCGATGGAAAGATTGTAACATCATTCACTCGAAAGTGCTGCACCTGT
TCTTTGCCATACTGCAGAGAGATCAATGCAAACTTTAATGTATTGGTTCTGTCATCAAACAGAGCCAACCGGGAGATTCATCTTCCTGAAATTGGAGGCGACGAT
CCATCAGTGATCTACGTTAAACCCGGACTCGAAGCTGATCTAGATTCACTAGTACGTGACACAATTAGACTTACCACCTCAACCAAGGACACTTGCTCAGAGTTG
TGTGAGAAATCTCAACCCATAGTGCAACATATTGGAGCACAGAATGCTGCATCTATCGACAAGAGGTGGTCCAGGCTTTTGGAGCTTAGAAAATCTAATGTATAG

mRNA sequence

Show/hide mRNA sequence

TGTTTTCAGAGATTATAGGCAACAAAATACCTGCCAAATAGGTAGAGAGATAAACAGCGAAACTTAAATGAAGATATTTCCAAACAAATTGGGCCCTTATATTTT
TTGCAGATAAGGTTCCAATTCCAACTTCCTGCTTTCTCCACGTATTGTCATCTCTCTAGGCTCACAGAGAAATGGCAGAAGCTGGGCACCTTCTAACAGCCAGAA
ATATCAACTCCATTTCAAGTTCATTCAATAAAGCAGCACTCAAATCTGCAACTCAAACATTCAAAATCAAAGCTTCTTCAAAGAGAAATGACATCTCCTTGGTAA
AACACCACCTCCTTTTCCTATCAGATTTCTGCATATTTCCATTTTCAATCACTCTTCCTTTTCGTCTCTCTTCTTTCCAACAATTTCCTTTCCATTTCAAAATTT
GGATCAGTCTCTCTAGTTTCTGGCTTCTACTTTGCTCTAGAAGAAGCAGCAAGACTCCACGGCGTCTGATCACAATATCGACATCGGGAAGCAGATGGCAGGGGA
AGTGGACCTGTGATTACCTGCTTTCCCTGCAAGACCTAAACTTGGAAGACTTAGTAGAAGATGATAACAAAAATGCACATGTCTTCATCAACCTCTGTATTGAGA
AGCATGCAAGTTTCGGGTTCACTGTCGATGGAAAGATTGTAACATCATTCACTCGAAAGTGCTGCACCTGTTCTTTGCCATACTGCAGAGAGATCAATGCAAACT
TTAATGTATTGGTTCTGTCATCAAACAGAGCCAACCGGGAGATTCATCTTCCTGAAATTGGAGGCGACGATCCATCAGTGATCTACGTTAAACCCGGACTCGAAG
CTGATCTAGATTCACTAGTACGTGACACAATTAGACTTACCACCTCAACCAAGGACACTTGCTCAGAGTTGTGTGAGAAATCTCAACCCATAGTGCAACATATTG
GAGCACAGAATGCTGCATCTATCGACAAGAGGTGGTCCAGGCTTTTGGAGCTTAGAAAATCTAATGTATAGATAATGAGCAATATATATGCATGTATATATTTAT
ATTGATGGTTGTTCATCAAGGCTTTTAAAACATGATTGCCCATTGGTAACATTAAATTATTTATCATGGTTTCTAAGTCAATATCATAATGGAAAAGAGGTTGAC
ATCTCATCGAAAAGCACTGGAATTAAAACTAATTTTGCAGCATCAATTACAATCCTCCTTCAGGTTGAAAAGCATATGAATAGAAGACCCAATAAGTAACTACTG
CTTGTCGGTAACATACAATTGTCTTTTGTTTCACCAAACCATTCATTAGATGTTTCAAAACAGAGCCAAACCAACCAGGACATCCAGCAACAACTGAATGCTGGA
TGTACAGTTTGAAGCTATTGTTGTATGTAAGTTACTACACCGTTGATGGCTGGCAACCTCTAAAACGGTCATATATCCCCCCCAC

Protein sequence

Show/hide protein sequence

MAEAGHLLTARNINSISSSFNKAALKSATQTFKIKASSKRNDISLVKHHLLFLSDFCIFPFSITLPFRLSSFQQFPFHFKIWISLSSFWLLLCSRRSSKTPRRLI
TISTSGSRWQGKWTCDYLLSLQDLNLEDLVEDDNKNAHVFINLCIEKHASFGFTVDGKIVTSFTRKCCTCSLPYCREINANFNVLVLSSNRANREIHLPEIGGDD
PSVIYVKPGLEADLDSLVRDTIRLTTSTKDTCSELCEKSQPIVQHIGAQNAASIDKRWSRLLELRKSNV

Lcy02g003680 (gene) of Sponge gourd (P93075) v1 genome