; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy02g007100 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy02g007100
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr02:9588655..9589879
RNA-Seq ExpressionLcy02g007100
SyntenyLcy02g007100
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015385738.1 uncharacterized protein LOC107177034 [Citrus sinensis]9.7e-1425.72Show/hide
Query:  CRICWRGVESIDHALCGCKRAKQICDLL-FPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLME----KPIIEWYARGDWIQRYW
        C+IC +G E+  H L  CK AK++     F     D  V  +  + ++ +AK L+  D E   +  WTIW  RN FL E    +P++        ++ Y 
Subjt:  CRICWRGVESIDHALCGCKRAKQICDLL-FPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLME----KPIIEWYARGDWIQRYW

Query:  EESRETNAKKGFVEVESSPSRVVS---TTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLYS
           + T   +   +  S   +V S       K+  D AV   +   G+GVVI D  +K+  A       T      E +A+   + +      +   + S
Subjt:  EESRETNAKKGFVEVESSPSRVVS---TTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLYS

Query:  DSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM
        D    +++I  ++ +  E+   IS+IQ + ++  ++S +H  R+ N  A +LAK AL+++  ++WL   P  ++S+
Subjt:  DSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.3e-1829.29Show/hide
Query:  CRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILY--LAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWEES
        C IC    ESI HA   CKRA+QI   LFP + T +   +N +   L+  L + L  +D   A  T W IWNDRNS +  K +     + +W+  + +  
Subjt:  CRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILY--LAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWEES

Query:  RETNAKKGFVEVESSPSRVV------STTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLYS
         +          +S+   VV      S+   K+ TD A +        G +I D    L  A ++     LSPL  E++ I   ++          ++ S
Subjt:  RETNAKKGFVEVESSPSRVV------STTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLYS

Query:  DSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQS-SRFILWLSNFPQLLKSMGQK
        DSL AI++I  +  T  +  +W+ +IQ +      +S  H  R  N  A  LAK  + S S    WL NFP  L  + Q+
Subjt:  DSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQS-SRFILWLSNFPQLLKSMGQK

XP_030497600.1 uncharacterized protein LOC115713257 [Cannabis sativa]3.0e-1524.19Show/hide
Query:  SSLCRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWEE
        S+ C +C R  ESI HAL  C  AK +      ++D          D +L+L+  L+  + EK   T W IW+DRN+++  K +    A     + Y   
Subjt:  SSLCRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWEE

Query:  SRET-NAKKGFVEVESSPSRVV-----STTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLY
             +A    V   ++ +R V     + +  K+  D A+ S +  +G+GV+I D   ++  AM+            E +A+F  ++   ++Q++   + 
Subjt:  SRET-NAKKGFVEVESSPSRVV-----STTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLY

Query:  SDSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM
        +D L  +  +   Q      H  +  I        +  + H+ R  N  A  LAK+ALQ     +W+   P  + S+
Subjt:  SDSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM

XP_030502555.1 uncharacterized protein LOC115717715 [Cannabis sativa]1.7e-1826.35Show/hide
Query:  SSLCRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWE-
        S+ C +C R  ESI HAL  C  AK +      ++D          D +++L+  L+N + E+   T W IW+DRN+F+  K + +  A     + Y   
Subjt:  SSLCRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWE-

Query:  -ESRETNAKKGFVEVESSPSRVVST----TRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLY
          S +  A      V +  +RV  T    T+ K+  D A+ S +  +G+GV+I D    +  AM+            E +A+F  ++L  ++Q++   + 
Subjt:  -ESRETNAKKGFVEVESSPSRVVST----TRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLY

Query:  SDSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM
        +D L  +  I   Q      H  +  I      S +  + H+ R  N  A  LAK+ALQ     +W+   P  + S+
Subjt:  SDSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM

XP_030508852.1 uncharacterized protein LOC115723496 [Cannabis sativa]1.7e-1323.43Show/hide
Query:  SSLCRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRY---
        S  C IC    E++ HAL  C RAK + +L    +D   +  ++ AD +L L+  LS+ + E      W+IW++RN+      +    A   +   Y   
Subjt:  SSLCRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRY---

Query:  WEESRETNAKKGFVEVESSPSRVVSTTRH------------KIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIR
        ++++R  NAK       ++PSR  S   H            K+ TD A+  ++  +G+G V+ + D  +  A++            E   +  ++  L+ 
Subjt:  WEESRETNAKKGFVEVESSPSRVVSTTRH------------KIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIR

Query:  MQIKEADLYSDSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM
          +    + +DSL  ++ +          H  ++ I  +        + H+ R+ N  A  LAK AL      +WL  FP  L ++
Subjt:  MQIKEADLYSDSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248746.4e-1929.29Show/hide
Query:  CRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILY--LAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWEES
        C IC    ESI HA   CKRA+QI   LFP + T +   +N +   L+  L + L  +D   A  T W IWNDRNS +  K +     + +W+  + +  
Subjt:  CRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILY--LAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWEES

Query:  RETNAKKGFVEVESSPSRVV------STTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLYS
         +          +S+   VV      S+   K+ TD A +        G +I D    L  A ++     LSPL  E++ I   ++          ++ S
Subjt:  RETNAKKGFVEVESSPSRVV------STTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLYS

Query:  DSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQS-SRFILWLSNFPQLLKSMGQK
        DSL AI++I  +  T  +  +W+ +IQ +      +S  H  R  N  A  LAK  + S S    WL NFP  L  + Q+
Subjt:  DSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQS-SRFILWLSNFPQLLKSMGQK

A0A803NGI9 Uncharacterized protein1.1e-1524.18Show/hide
Query:  CRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIE----WYARGDWIQRYWE
        C +C    ES++HAL  CK AK++  +    ++ D+V   +FAD ++ L+   S  + E+   T W +WNDRN+F+  KP +     W     +   + +
Subjt:  CRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIE----WYARGDWIQRYWE

Query:  ESRETNAKKGFVEVESSPSRV-VSTTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLYSDSL
        +S  + + +      + P  +     + K+  D A    +  +GVG++I +   ++  A +      L P   E +A+   I    R  +      SDSL
Subjt:  ESRETNAKKGFVEVESSPSRV-VSTTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLYSDSL

Query:  NAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM
          +  I    +        +  I+       SV + H+ R  N  A  LAK AL+     +W    P  + S+
Subjt:  NAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM

A0A803NJJ8 Uncharacterized protein8.0e-1422.89Show/hide
Query:  CRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEK----PIIEWYARGDWIQRYWE
        C +C +  E+I HAL  C RAK++  L   +++  +   ++  + + Y +   S  DFE+  +  W+IW +RN+   +K    P        D++ +Y  
Subjt:  CRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEK----PIIEWYARGDWIQRYWE

Query:  ---ESRETNAKKGFVEVESSPSRVVSTT---------RHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQ
           +S   N+    +   +S S+V ++T         + K+ TD A       +G+G V+ D    +  A +            E  A+ HA++ L+ + 
Subjt:  ---ESRETNAKKGFVEVESSPSRVVSTT---------RHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQ

Query:  IKEADLYSDSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM
        +    + +DSL  ++ +          H  ++ +  +        + H+ R+ N  AD LAK AL       WL  FP  L ++
Subjt:  IKEADLYSDSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM

A0A803PIB6 Uncharacterized protein1.5e-1524.19Show/hide
Query:  SSLCRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWEE
        S+ C +C R  ESI HAL  C  AK +      ++D          D +L+L+  L+  + EK   T W IW+DRN+++  K +    A     + Y   
Subjt:  SSLCRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWEE

Query:  SRET-NAKKGFVEVESSPSRVV-----STTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLY
             +A    V   ++ +R V     + +  K+  D A+ S +  +G+GV+I D   ++  AM+            E +A+F  ++   ++Q++   + 
Subjt:  SRET-NAKKGFVEVESSPSRVV-----STTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLY

Query:  SDSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM
        +D L  +  +   Q      H  +  I        +  + H+ R  N  A  LAK+ALQ     +W+   P  + S+
Subjt:  SDSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM

A0A803PKJ2 Uncharacterized protein1.5e-1523.83Show/hide
Query:  SSLCRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWEE
        S+ C +C R  ESI HAL  C  AK +       +D          D +++L+  L+  + E+   T W IW+DRN+F+  K + +  A     + Y   
Subjt:  SSLCRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWEE

Query:  SRETNAKKGFV------EVESSPSRVVSTTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLY
         +        V      +V          T+ K+  D A+ S +  +G+GV+I D    +  AM+            E +A+F  ++    +Q++   + 
Subjt:  SRETNAKKGFV------EVESSPSRVVSTTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLY

Query:  SDSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM
        +D +  +  I   Q      H  +  I      S +  + H+ R  N  A  LAK+ALQ     +W+   P  + S+
Subjt:  SDSLNAIRMITKDQDTDYEVHHWISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTATCATCTTTATGCAGGATTTGTTGGCGCGGTGTTGAAAGTATAGATCATGCTTTATGTGGTTGCAAGCGAGCTAAACAGATTTGTGATTTACTCTTTCCACG
GGTTGACACTGATATTGTAGTTGCTAATAATTTTGCCGATAGAATTCTATATTTAGCAAAATATCTTAGCAATGAGGATTTTGAGAAAGCTTGCAGTACATTTTGGACAA
TCTGGAATGATAGGAATAGTTTCCTTATGGAAAAACCTATCATAGAGTGGTATGCAAGGGGTGATTGGATTCAAAGATATTGGGAGGAATCTCGAGAGACAAATGCTAAA
AAGGGATTTGTTGAAGTGGAGTCATCCCCTAGTCGTGTAGTTTCGACTACAAGACATAAAATATTTACAGATGTTGCTGTGCAATCTCAAAAGGTGGGGGTTGGAGTTGG
GGTGGTTATCACCGATGGTGATGACAAGTTACATTGTGCAATGAATATGTTTGAGCATCGAACTCTATCCCCTTTGGCGACAGAAGTGCAAGCTATTTTTCATGCGATAA
GGTTGTTAATTCGTATGCAAATCAAGGAGGCTGATTTATATTCAGATTCGTTAAATGCAATCCGGATGATCACCAAGGACCAGGACACAGATTACGAGGTGCATCATTGG
ATTTCACAAATCCAAGAGATGTGTCAAGAATCCCTTTCGGTATCGCTTTTCCATATTGGTAGAACTCTAAATGGAAGGGCGGATGCTTTAGCCAAGAAGGCGCTTCAAAG
TTCTCGATTTATTTTATGGTTATCTAATTTTCCACAATTGTTGAAATCAATGGGACAAAAGGCCCATTGTAAATGTACTATGTCTTGTGGTTGCCATTTATAA
mRNA sequenceShow/hide mRNA sequence
CGAATTGATGGTTGCTGATTTCATGTCCCATTCAAATGGGTGGGATATGGAAAAAATAAGAAATGTGGTCATGGAAGAGGATGCGTTGCTGATTCAATCCATTCCGATTG
GCGGCCTAAACCATGAAGATAGCTGGATATGACATTATTCAAGGAGTGGTGAGTACTCTACAAAAAGTGGGTACAAACTTGAGGTGAGTTCGAGGATCAGTGAAGTTTCA
ACGAGTTCATATGAACATGGTAAGTGGTGAAAACATTTATGGAAATCTAAGATTCCATCGAAGATTAAATTATTTATATGGAAGGCTTATCATGGGTGCTTACCCACAAA
CTTTTGCCTGTGGAAGCGTGGAATGGATGTATCATCTTTATGCAGGATTTGTTGGCGCGGTGTTGAAAGTATAGATCATGCTTTATGTGGTTGCAAGCGAGCTAAACAGA
TTTGTGATTTACTCTTTCCACGGGTTGACACTGATATTGTAGTTGCTAATAATTTTGCCGATAGAATTCTATATTTAGCAAAATATCTTAGCAATGAGGATTTTGAGAAA
GCTTGCAGTACATTTTGGACAATCTGGAATGATAGGAATAGTTTCCTTATGGAAAAACCTATCATAGAGTGGTATGCAAGGGGTGATTGGATTCAAAGATATTGGGAGGA
ATCTCGAGAGACAAATGCTAAAAAGGGATTTGTTGAAGTGGAGTCATCCCCTAGTCGTGTAGTTTCGACTACAAGACATAAAATATTTACAGATGTTGCTGTGCAATCTC
AAAAGGTGGGGGTTGGAGTTGGGGTGGTTATCACCGATGGTGATGACAAGTTACATTGTGCAATGAATATGTTTGAGCATCGAACTCTATCCCCTTTGGCGACAGAAGTG
CAAGCTATTTTTCATGCGATAAGGTTGTTAATTCGTATGCAAATCAAGGAGGCTGATTTATATTCAGATTCGTTAAATGCAATCCGGATGATCACCAAGGACCAGGACAC
AGATTACGAGGTGCATCATTGGATTTCACAAATCCAAGAGATGTGTCAAGAATCCCTTTCGGTATCGCTTTTCCATATTGGTAGAACTCTAAATGGAAGGGCGGATGCTT
TAGCCAAGAAGGCGCTTCAAAGTTCTCGATTTATTTTATGGTTATCTAATTTTCCACAATTGTTGAAATCAATGGGACAAAAGGCCCATTGTAAATGTACTATGTCTTGT
GGTTGCCATTTATAA
Protein sequenceShow/hide protein sequence
MDVSSLCRICWRGVESIDHALCGCKRAKQICDLLFPRVDTDIVVANNFADRILYLAKYLSNEDFEKACSTFWTIWNDRNSFLMEKPIIEWYARGDWIQRYWEESRETNAK
KGFVEVESSPSRVVSTTRHKIFTDVAVQSQKVGVGVGVVITDGDDKLHCAMNMFEHRTLSPLATEVQAIFHAIRLLIRMQIKEADLYSDSLNAIRMITKDQDTDYEVHHW
ISQIQEMCQESLSVSLFHIGRTLNGRADALAKKALQSSRFILWLSNFPQLLKSMGQKAHCKCTMSCGCHL